Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:0244:0241
Extra
PDB:
ATOM 1 O3' A A 243 83.018 141.142 -9.507 1.00 85.31 O
ATOM 2 P C A 244 84.396 140.326 -9.354 1.00 85.99 P
ATOM 3 OP1 C A 244 84.658 139.640 -10.649 1.00 85.38 O
ATOM 4 OP2 C A 244 84.325 139.525 -8.101 1.00 86.18 O
ATOM 5 O5' C A 244 85.501 141.458 -9.144 1.00 84.98 O
ATOM 6 C5' C A 244 85.931 142.294 -10.235 1.00 82.75 C
ATOM 7 C4' C A 244 86.900 143.342 -9.738 1.00 82.22 C
ATOM 8 O4' C A 244 86.239 144.175 -8.747 1.00 82.36 O
ATOM 9 C3' C A 244 88.134 142.825 -9.014 1.00 81.62 C
ATOM 10 O3' C A 244 89.165 142.425 -9.912 1.00 79.74 O
ATOM 11 C2' C A 244 88.545 144.032 -8.181 1.00 82.26 C
ATOM 12 O2' C A 244 89.238 145.012 -8.928 1.00 81.72 O
ATOM 13 C1' C A 244 87.181 144.588 -7.767 1.00 82.99 C
ATOM 14 N1 C A 244 86.734 144.115 -6.440 1.00 84.25 N
ATOM 15 C2 C A 244 87.216 144.767 -5.287 1.00 85.14 C
ATOM 16 O2 C A 244 88.013 145.716 -5.412 1.00 85.40 O
ATOM 17 N3 C A 244 86.803 144.344 -4.070 1.00 85.61 N
ATOM 18 C4 C A 244 85.952 143.319 -3.971 1.00 85.42 C
ATOM 19 N4 C A 244 85.563 142.945 -2.748 1.00 84.79 N
ATOM 20 C5 C A 244 85.456 142.635 -5.121 1.00 85.14 C
ATOM 21 C6 C A 244 85.868 143.062 -6.322 1.00 84.66 C
ATOM 22 P G A 245 89.873 140.991 -9.729 1.00 79.98 P
ATOM 23 OP1 G A 245 91.051 140.953 -10.632 1.00 80.52 O
ATOM 24 OP2 G A 245 88.825 139.944 -9.849 1.00 80.13 O
ATOM 25 O5' G A 245 90.413 140.997 -8.227 1.00 80.01 O
TER
ATOM 1 O3' C B 240 80.337 138.563 3.841 1.00 61.41 O
ATOM 2 P U B 241 79.174 139.138 2.895 1.00 63.99 P
ATOM 3 OP1 U B 241 78.333 140.048 3.719 1.00 63.54 O
ATOM 4 OP2 U B 241 78.538 137.997 2.180 1.00 62.15 O
ATOM 5 O5' U B 241 79.965 140.017 1.828 1.00 66.03 O
ATOM 6 C5' U B 241 80.632 141.234 2.224 1.00 70.37 C
ATOM 7 C4' U B 241 81.292 141.892 1.033 1.00 72.94 C
ATOM 8 O4' U B 241 82.399 141.075 0.564 1.00 73.20 O
ATOM 9 C3' U B 241 80.429 142.070 -0.206 1.00 75.16 C
ATOM 10 O3' U B 241 79.546 143.185 -0.102 1.00 78.48 O
ATOM 11 C2' U B 241 81.482 142.246 -1.293 1.00 75.08 C
ATOM 12 O2' U B 241 82.042 143.545 -1.303 1.00 75.01 O
ATOM 13 C1' U B 241 82.549 141.242 -0.840 1.00 74.26 C
ATOM 14 N1 U B 241 82.426 139.931 -1.501 1.00 73.25 N
ATOM 15 C2 U B 241 83.183 139.713 -2.644 1.00 73.07 C
ATOM 16 O2 U B 241 83.961 140.537 -3.094 1.00 73.44 O
ATOM 17 N3 U B 241 82.993 138.492 -3.242 1.00 72.57 N
ATOM 18 C4 U B 241 82.136 137.494 -2.838 1.00 71.09 C
ATOM 19 O4 U B 241 82.049 136.466 -3.508 1.00 69.71 O
ATOM 20 C5 U B 241 81.412 137.779 -1.640 1.00 71.56 C
ATOM 21 C6 U B 241 81.579 138.956 -1.025 1.00 73.17 C
ATOM 22 P C B 242 78.008 143.023 -0.551 1.00 80.98 P
ATOM 23 OP1 C B 242 77.401 144.377 -0.640 1.00 80.63 O
ATOM 24 OP2 C B 242 77.387 141.999 0.331 1.00 80.63 O
ATOM 25 O5' C B 242 78.108 142.417 -2.021 1.00 81.12 O
TER
ATOM 2 P C A 244 84.396 140.326 -9.354 1.00 85.99 P
ATOM 3 OP1 C A 244 84.658 139.640 -10.649 1.00 85.38 O
ATOM 4 OP2 C A 244 84.325 139.525 -8.101 1.00 86.18 O
ATOM 5 O5' C A 244 85.501 141.458 -9.144 1.00 84.98 O
ATOM 6 C5' C A 244 85.931 142.294 -10.235 1.00 82.75 C
ATOM 7 C4' C A 244 86.900 143.342 -9.738 1.00 82.22 C
ATOM 8 O4' C A 244 86.239 144.175 -8.747 1.00 82.36 O
ATOM 9 C3' C A 244 88.134 142.825 -9.014 1.00 81.62 C
ATOM 10 O3' C A 244 89.165 142.425 -9.912 1.00 79.74 O
ATOM 11 C2' C A 244 88.545 144.032 -8.181 1.00 82.26 C
ATOM 12 O2' C A 244 89.238 145.012 -8.928 1.00 81.72 O
ATOM 13 C1' C A 244 87.181 144.588 -7.767 1.00 82.99 C
ATOM 14 N1 C A 244 86.734 144.115 -6.440 1.00 84.25 N
ATOM 15 C2 C A 244 87.216 144.767 -5.287 1.00 85.14 C
ATOM 16 O2 C A 244 88.013 145.716 -5.412 1.00 85.40 O
ATOM 17 N3 C A 244 86.803 144.344 -4.070 1.00 85.61 N
ATOM 18 C4 C A 244 85.952 143.319 -3.971 1.00 85.42 C
ATOM 19 N4 C A 244 85.563 142.945 -2.748 1.00 84.79 N
ATOM 20 C5 C A 244 85.456 142.635 -5.121 1.00 85.14 C
ATOM 21 C6 C A 244 85.868 143.062 -6.322 1.00 84.66 C
ATOM 22 P G A 245 89.873 140.991 -9.729 1.00 79.98 P
ATOM 23 OP1 G A 245 91.051 140.953 -10.632 1.00 80.52 O
ATOM 24 OP2 G A 245 88.825 139.944 -9.849 1.00 80.13 O
ATOM 25 O5' G A 245 90.413 140.997 -8.227 1.00 80.01 O
TER
ATOM 1 O3' C B 240 80.337 138.563 3.841 1.00 61.41 O
ATOM 2 P U B 241 79.174 139.138 2.895 1.00 63.99 P
ATOM 3 OP1 U B 241 78.333 140.048 3.719 1.00 63.54 O
ATOM 4 OP2 U B 241 78.538 137.997 2.180 1.00 62.15 O
ATOM 5 O5' U B 241 79.965 140.017 1.828 1.00 66.03 O
ATOM 6 C5' U B 241 80.632 141.234 2.224 1.00 70.37 C
ATOM 7 C4' U B 241 81.292 141.892 1.033 1.00 72.94 C
ATOM 8 O4' U B 241 82.399 141.075 0.564 1.00 73.20 O
ATOM 9 C3' U B 241 80.429 142.070 -0.206 1.00 75.16 C
ATOM 10 O3' U B 241 79.546 143.185 -0.102 1.00 78.48 O
ATOM 11 C2' U B 241 81.482 142.246 -1.293 1.00 75.08 C
ATOM 12 O2' U B 241 82.042 143.545 -1.303 1.00 75.01 O
ATOM 13 C1' U B 241 82.549 141.242 -0.840 1.00 74.26 C
ATOM 14 N1 U B 241 82.426 139.931 -1.501 1.00 73.25 N
ATOM 15 C2 U B 241 83.183 139.713 -2.644 1.00 73.07 C
ATOM 16 O2 U B 241 83.961 140.537 -3.094 1.00 73.44 O
ATOM 17 N3 U B 241 82.993 138.492 -3.242 1.00 72.57 N
ATOM 18 C4 U B 241 82.136 137.494 -2.838 1.00 71.09 C
ATOM 19 O4 U B 241 82.049 136.466 -3.508 1.00 69.71 O
ATOM 20 C5 U B 241 81.412 137.779 -1.640 1.00 71.56 C
ATOM 21 C6 U B 241 81.579 138.956 -1.025 1.00 73.17 C
ATOM 22 P C B 242 78.008 143.023 -0.551 1.00 80.98 P
ATOM 23 OP1 C B 242 77.401 144.377 -0.640 1.00 80.63 O
ATOM 24 OP2 C B 242 77.387 141.999 0.331 1.00 80.63 O
ATOM 25 O5' C B 242 78.108 142.417 -2.021 1.00 81.12 O
TER
Atoms:
C2: (87.216,144.767,-5.287)
OP1: (84.658,139.640,-10.649)
OP2: (84.325,139.525,-8.101)
C4: (85.952,143.319,-3.971)
O5': (85.501,141.458,-9.144)
C3': (88.134,142.825,-9.014)
C1': (87.181,144.588,-7.767)
O4': (86.239,144.175,-8.747)
C5': (85.931,142.294,-10.235)
P: (84.396,140.326,-9.354)
O2: (88.013,145.716,-5.412)
C4': (86.900,143.342,-9.738)
C2': (88.545,144.032,-8.181)
O2': (89.238,145.012,-8.928)
N1: (86.734,144.115,-6.440)
N3: (86.803,144.344,-4.070)
N4: (85.563,142.945,-2.748)
C6: (85.868,143.062,-6.322)
C5: (85.456,142.635,-5.121)
O3': (89.165,142.425,-9.912)
OP1: (84.658,139.640,-10.649)
OP2: (84.325,139.525,-8.101)
C4: (85.952,143.319,-3.971)
O5': (85.501,141.458,-9.144)
C3': (88.134,142.825,-9.014)
C1': (87.181,144.588,-7.767)
O4': (86.239,144.175,-8.747)
C5': (85.931,142.294,-10.235)
P: (84.396,140.326,-9.354)
O2: (88.013,145.716,-5.412)
C4': (86.900,143.342,-9.738)
C2': (88.545,144.032,-8.181)
O2': (89.238,145.012,-8.928)
N1: (86.734,144.115,-6.440)
N3: (86.803,144.344,-4.070)
N4: (85.563,142.945,-2.748)
C6: (85.868,143.062,-6.322)
C5: (85.456,142.635,-5.121)
O3': (89.165,142.425,-9.912)
C4: (82.136,137.494,-2.838)
N3: (82.993,138.492,-3.242)
OP1: (78.333,140.048,3.719)
OP2: (78.538,137.997,2.180)
C2: (83.183,139.713,-2.644)
C1': (82.549,141.242,-0.840)
C3': (80.429,142.070,-0.206)
O5': (79.965,140.017,1.828)
O4': (82.399,141.075,0.564)
C5': (80.632,141.234,2.224)
P: (79.174,139.138,2.895)
C4': (81.292,141.892,1.033)
C2': (81.482,142.246,-1.293)
O2': (82.042,143.545,-1.303)
N1: (82.426,139.931,-1.501)
O4: (82.049,136.466,-3.508)
O2: (83.961,140.537,-3.094)
C6: (81.579,138.956,-1.025)
C5: (81.412,137.779,-1.640)
O3': (79.546,143.185,-0.102)
N3: (82.993,138.492,-3.242)
OP1: (78.333,140.048,3.719)
OP2: (78.538,137.997,2.180)
C2: (83.183,139.713,-2.644)
C1': (82.549,141.242,-0.840)
C3': (80.429,142.070,-0.206)
O5': (79.965,140.017,1.828)
O4': (82.399,141.075,0.564)
C5': (80.632,141.234,2.224)
P: (79.174,139.138,2.895)
C4': (81.292,141.892,1.033)
C2': (81.482,142.246,-1.293)
O2': (82.042,143.545,-1.303)
N1: (82.426,139.931,-1.501)
O4: (82.049,136.466,-3.508)
O2: (83.961,140.537,-3.094)
C6: (81.579,138.956,-1.025)
C5: (81.412,137.779,-1.640)
O3': (79.546,143.185,-0.102)
Image (generated by PyMOL):