Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0244:0241
Extra
PDB:
ATOM 1 O3' A A 243 83.585 141.431 -9.195 1.00 76.83 O
ATOM 2 P C A 244 84.993 140.658 -9.051 1.00 78.46 P
ATOM 3 OP1 C A 244 85.268 139.994 -10.352 1.00 77.38 O
ATOM 4 OP2 C A 244 84.967 139.842 -7.806 1.00 78.67 O
ATOM 5 O5' C A 244 86.066 141.820 -8.849 1.00 76.01 O
ATOM 6 C5' C A 244 86.487 142.647 -9.948 1.00 72.62 C
ATOM 7 C4' C A 244 87.395 143.751 -9.456 1.00 71.12 C
ATOM 8 O4' C A 244 86.684 144.555 -8.477 1.00 70.99 O
ATOM 9 C3' C A 244 88.649 143.308 -8.719 1.00 70.59 C
ATOM 10 O3' C A 244 89.699 142.959 -9.610 1.00 68.16 O
ATOM 11 C2' C A 244 88.990 144.546 -7.901 1.00 71.53 C
ATOM 12 O2' C A 244 89.620 145.561 -8.658 1.00 71.23 O
ATOM 13 C1' C A 244 87.595 145.026 -7.495 1.00 72.11 C
ATOM 14 N1 C A 244 87.170 144.532 -6.170 1.00 73.90 N
ATOM 15 C2 C A 244 87.672 145.164 -5.017 1.00 74.70 C
ATOM 16 O2 C A 244 88.479 146.104 -5.141 1.00 74.51 O
ATOM 17 N3 C A 244 87.268 144.731 -3.800 1.00 75.26 N
ATOM 18 C4 C A 244 86.411 143.713 -3.703 1.00 74.46 C
ATOM 19 N4 C A 244 86.029 143.330 -2.481 1.00 74.07 N
ATOM 20 C5 C A 244 85.901 143.044 -4.854 1.00 74.37 C
ATOM 21 C6 C A 244 86.301 143.482 -6.054 1.00 74.20 C
ATOM 22 P G A 245 90.403 141.521 -9.489 1.00 68.46 P
ATOM 23 OP1 G A 245 91.570 141.516 -10.405 1.00 69.59 O
ATOM 24 OP2 G A 245 89.350 140.479 -9.632 1.00 68.78 O
ATOM 25 O5' G A 245 90.966 141.473 -7.999 1.00 68.36 O
TER
ATOM 1 O3' C B 240 80.866 138.959 4.075 1.00 54.65 O
ATOM 2 P U B 241 79.679 139.549 3.172 1.00 59.17 P
ATOM 3 OP1 U B 241 78.884 140.455 4.043 1.00 58.65 O
ATOM 4 OP2 U B 241 79.000 138.435 2.458 1.00 58.02 O
ATOM 5 O5' U B 241 80.440 140.426 2.083 1.00 61.49 O
ATOM 6 C5' U B 241 81.146 141.625 2.456 1.00 63.72 C
ATOM 7 C4' U B 241 81.758 142.271 1.238 1.00 65.43 C
ATOM 8 O4' U B 241 82.835 141.441 0.727 1.00 65.46 O
ATOM 9 C3' U B 241 80.836 142.425 0.041 1.00 67.54 C
ATOM 10 O3' U B 241 79.943 143.527 0.164 1.00 70.52 O
ATOM 11 C2' U B 241 81.830 142.585 -1.099 1.00 67.53 C
ATOM 12 O2' U B 241 82.391 143.882 -1.157 1.00 68.03 O
ATOM 13 C1' U B 241 82.914 141.585 -0.684 1.00 66.82 C
ATOM 14 N1 U B 241 82.745 140.264 -1.313 1.00 66.06 N
ATOM 15 C2 U B 241 83.555 139.957 -2.396 1.00 65.85 C
ATOM 16 O2 U B 241 84.411 140.712 -2.821 1.00 66.17 O
ATOM 17 N3 U B 241 83.323 138.730 -2.966 1.00 65.67 N
ATOM 18 C4 U B 241 82.387 137.797 -2.579 1.00 64.92 C
ATOM 19 O4 U B 241 82.240 136.773 -3.249 1.00 65.19 O
ATOM 20 C5 U B 241 81.606 138.175 -1.443 1.00 65.30 C
ATOM 21 C6 U B 241 81.807 139.363 -0.862 1.00 65.96 C
ATOM 22 P C B 242 78.407 143.354 -0.284 1.00 73.81 P
ATOM 23 OP1 C B 242 77.801 144.707 -0.361 1.00 74.04 O
ATOM 24 OP2 C B 242 77.789 142.323 0.595 1.00 73.30 O
ATOM 25 O5' C B 242 78.504 142.764 -1.763 1.00 73.53 O
TER
ATOM 2 P C A 244 84.993 140.658 -9.051 1.00 78.46 P
ATOM 3 OP1 C A 244 85.268 139.994 -10.352 1.00 77.38 O
ATOM 4 OP2 C A 244 84.967 139.842 -7.806 1.00 78.67 O
ATOM 5 O5' C A 244 86.066 141.820 -8.849 1.00 76.01 O
ATOM 6 C5' C A 244 86.487 142.647 -9.948 1.00 72.62 C
ATOM 7 C4' C A 244 87.395 143.751 -9.456 1.00 71.12 C
ATOM 8 O4' C A 244 86.684 144.555 -8.477 1.00 70.99 O
ATOM 9 C3' C A 244 88.649 143.308 -8.719 1.00 70.59 C
ATOM 10 O3' C A 244 89.699 142.959 -9.610 1.00 68.16 O
ATOM 11 C2' C A 244 88.990 144.546 -7.901 1.00 71.53 C
ATOM 12 O2' C A 244 89.620 145.561 -8.658 1.00 71.23 O
ATOM 13 C1' C A 244 87.595 145.026 -7.495 1.00 72.11 C
ATOM 14 N1 C A 244 87.170 144.532 -6.170 1.00 73.90 N
ATOM 15 C2 C A 244 87.672 145.164 -5.017 1.00 74.70 C
ATOM 16 O2 C A 244 88.479 146.104 -5.141 1.00 74.51 O
ATOM 17 N3 C A 244 87.268 144.731 -3.800 1.00 75.26 N
ATOM 18 C4 C A 244 86.411 143.713 -3.703 1.00 74.46 C
ATOM 19 N4 C A 244 86.029 143.330 -2.481 1.00 74.07 N
ATOM 20 C5 C A 244 85.901 143.044 -4.854 1.00 74.37 C
ATOM 21 C6 C A 244 86.301 143.482 -6.054 1.00 74.20 C
ATOM 22 P G A 245 90.403 141.521 -9.489 1.00 68.46 P
ATOM 23 OP1 G A 245 91.570 141.516 -10.405 1.00 69.59 O
ATOM 24 OP2 G A 245 89.350 140.479 -9.632 1.00 68.78 O
ATOM 25 O5' G A 245 90.966 141.473 -7.999 1.00 68.36 O
TER
ATOM 1 O3' C B 240 80.866 138.959 4.075 1.00 54.65 O
ATOM 2 P U B 241 79.679 139.549 3.172 1.00 59.17 P
ATOM 3 OP1 U B 241 78.884 140.455 4.043 1.00 58.65 O
ATOM 4 OP2 U B 241 79.000 138.435 2.458 1.00 58.02 O
ATOM 5 O5' U B 241 80.440 140.426 2.083 1.00 61.49 O
ATOM 6 C5' U B 241 81.146 141.625 2.456 1.00 63.72 C
ATOM 7 C4' U B 241 81.758 142.271 1.238 1.00 65.43 C
ATOM 8 O4' U B 241 82.835 141.441 0.727 1.00 65.46 O
ATOM 9 C3' U B 241 80.836 142.425 0.041 1.00 67.54 C
ATOM 10 O3' U B 241 79.943 143.527 0.164 1.00 70.52 O
ATOM 11 C2' U B 241 81.830 142.585 -1.099 1.00 67.53 C
ATOM 12 O2' U B 241 82.391 143.882 -1.157 1.00 68.03 O
ATOM 13 C1' U B 241 82.914 141.585 -0.684 1.00 66.82 C
ATOM 14 N1 U B 241 82.745 140.264 -1.313 1.00 66.06 N
ATOM 15 C2 U B 241 83.555 139.957 -2.396 1.00 65.85 C
ATOM 16 O2 U B 241 84.411 140.712 -2.821 1.00 66.17 O
ATOM 17 N3 U B 241 83.323 138.730 -2.966 1.00 65.67 N
ATOM 18 C4 U B 241 82.387 137.797 -2.579 1.00 64.92 C
ATOM 19 O4 U B 241 82.240 136.773 -3.249 1.00 65.19 O
ATOM 20 C5 U B 241 81.606 138.175 -1.443 1.00 65.30 C
ATOM 21 C6 U B 241 81.807 139.363 -0.862 1.00 65.96 C
ATOM 22 P C B 242 78.407 143.354 -0.284 1.00 73.81 P
ATOM 23 OP1 C B 242 77.801 144.707 -0.361 1.00 74.04 O
ATOM 24 OP2 C B 242 77.789 142.323 0.595 1.00 73.30 O
ATOM 25 O5' C B 242 78.504 142.764 -1.763 1.00 73.53 O
TER
Atoms:
C2: (87.672,145.164,-5.017)
OP1: (85.268,139.994,-10.352)
OP2: (84.967,139.842,-7.806)
C4: (86.411,143.713,-3.703)
O5': (86.066,141.820,-8.849)
C3': (88.649,143.308,-8.719)
C1': (87.595,145.026,-7.495)
O4': (86.684,144.555,-8.477)
C5': (86.487,142.647,-9.948)
P: (84.993,140.658,-9.051)
O2: (88.479,146.104,-5.141)
C4': (87.395,143.751,-9.456)
C2': (88.990,144.546,-7.901)
O2': (89.620,145.561,-8.658)
N1: (87.170,144.532,-6.170)
N3: (87.268,144.731,-3.800)
N4: (86.029,143.330,-2.481)
C6: (86.301,143.482,-6.054)
C5: (85.901,143.044,-4.854)
O3': (89.699,142.959,-9.610)
OP1: (85.268,139.994,-10.352)
OP2: (84.967,139.842,-7.806)
C4: (86.411,143.713,-3.703)
O5': (86.066,141.820,-8.849)
C3': (88.649,143.308,-8.719)
C1': (87.595,145.026,-7.495)
O4': (86.684,144.555,-8.477)
C5': (86.487,142.647,-9.948)
P: (84.993,140.658,-9.051)
O2: (88.479,146.104,-5.141)
C4': (87.395,143.751,-9.456)
C2': (88.990,144.546,-7.901)
O2': (89.620,145.561,-8.658)
N1: (87.170,144.532,-6.170)
N3: (87.268,144.731,-3.800)
N4: (86.029,143.330,-2.481)
C6: (86.301,143.482,-6.054)
C5: (85.901,143.044,-4.854)
O3': (89.699,142.959,-9.610)
C4: (82.387,137.797,-2.579)
N3: (83.323,138.730,-2.966)
OP1: (78.884,140.455,4.043)
OP2: (79.000,138.435,2.458)
C2: (83.555,139.957,-2.396)
C1': (82.914,141.585,-0.684)
C3': (80.836,142.425,0.041)
O5': (80.440,140.426,2.083)
O4': (82.835,141.441,0.727)
C5': (81.146,141.625,2.456)
P: (79.679,139.549,3.172)
C4': (81.758,142.271,1.238)
C2': (81.830,142.585,-1.099)
O2': (82.391,143.882,-1.157)
N1: (82.745,140.264,-1.313)
O4: (82.240,136.773,-3.249)
O2: (84.411,140.712,-2.821)
C6: (81.807,139.363,-0.862)
C5: (81.606,138.175,-1.443)
O3': (79.943,143.527,0.164)
N3: (83.323,138.730,-2.966)
OP1: (78.884,140.455,4.043)
OP2: (79.000,138.435,2.458)
C2: (83.555,139.957,-2.396)
C1': (82.914,141.585,-0.684)
C3': (80.836,142.425,0.041)
O5': (80.440,140.426,2.083)
O4': (82.835,141.441,0.727)
C5': (81.146,141.625,2.456)
P: (79.679,139.549,3.172)
C4': (81.758,142.271,1.238)
C2': (81.830,142.585,-1.099)
O2': (82.391,143.882,-1.157)
N1: (82.745,140.264,-1.313)
O4: (82.240,136.773,-3.249)
O2: (84.411,140.712,-2.821)
C6: (81.807,139.363,-0.862)
C5: (81.606,138.175,-1.443)
O3': (79.943,143.527,0.164)
Image (generated by PyMOL):