Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0244:0241
Extra
PDB:
ATOM 1 O3' A A 243 83.556 142.038 -9.200 1.00 88.32 O
ATOM 2 P C A 244 84.882 141.143 -9.024 1.00 90.13 P
ATOM 3 OP1 C A 244 85.093 140.433 -10.314 1.00 88.81 O
ATOM 4 OP2 C A 244 84.757 140.356 -7.769 1.00 91.21 O
ATOM 5 O5' C A 244 86.061 142.199 -8.810 1.00 88.09 O
ATOM 6 C5' C A 244 86.533 143.026 -9.893 1.00 85.02 C
ATOM 7 C4' C A 244 87.432 144.121 -9.363 1.00 83.31 C
ATOM 8 O4' C A 244 86.698 144.909 -8.389 1.00 83.35 O
ATOM 9 C3' C A 244 88.673 143.666 -8.608 1.00 82.78 C
ATOM 10 O3' C A 244 89.746 143.380 -9.494 1.00 81.34 O
ATOM 11 C2' C A 244 88.988 144.881 -7.746 1.00 83.34 C
ATOM 12 O2' C A 244 89.641 145.908 -8.464 1.00 83.61 O
ATOM 13 C1' C A 244 87.583 145.361 -7.376 1.00 83.80 C
ATOM 14 N1 C A 244 87.110 144.870 -6.065 1.00 85.21 N
ATOM 15 C2 C A 244 87.620 145.463 -4.895 1.00 85.65 C
ATOM 16 O2 C A 244 88.476 146.362 -4.994 1.00 85.45 O
ATOM 17 N3 C A 244 87.171 145.038 -3.691 1.00 85.51 N
ATOM 18 C4 C A 244 86.261 144.064 -3.622 1.00 85.17 C
ATOM 19 N4 C A 244 85.837 143.689 -2.411 1.00 85.00 N
ATOM 20 C5 C A 244 85.740 143.434 -4.790 1.00 85.13 C
ATOM 21 C6 C A 244 86.186 143.864 -5.977 1.00 85.35 C
ATOM 22 P G A 245 90.621 142.048 -9.293 1.00 82.16 P
ATOM 23 OP1 G A 245 91.828 142.199 -10.145 1.00 83.47 O
ATOM 24 OP2 G A 245 89.740 140.866 -9.470 1.00 82.19 O
ATOM 25 O5' G A 245 91.095 142.088 -7.773 1.00 81.55 O
TER
ATOM 1 O3' C B 240 81.013 139.514 4.140 1.00 66.19 O
ATOM 2 P U B 241 79.826 140.044 3.203 1.00 69.24 P
ATOM 3 OP1 U B 241 78.966 140.926 4.035 1.00 69.17 O
ATOM 4 OP2 U B 241 79.222 138.893 2.482 1.00 67.75 O
ATOM 5 O5' U B 241 80.583 140.940 2.130 1.00 71.64 O
ATOM 6 C5' U B 241 81.291 142.128 2.524 1.00 74.21 C
ATOM 7 C4' U B 241 81.918 142.778 1.317 1.00 76.20 C
ATOM 8 O4' U B 241 82.992 141.941 0.814 1.00 76.01 O
ATOM 9 C3' U B 241 80.998 142.932 0.118 1.00 78.37 C
ATOM 10 O3' U B 241 80.113 144.041 0.234 1.00 81.11 O
ATOM 11 C2' U B 241 81.991 143.066 -1.026 1.00 78.27 C
ATOM 12 O2' U B 241 82.566 144.355 -1.106 1.00 79.43 O
ATOM 13 C1' U B 241 83.064 142.061 -0.599 1.00 77.86 C
ATOM 14 N1 U B 241 82.875 140.732 -1.204 1.00 77.44 N
ATOM 15 C2 U B 241 83.651 140.408 -2.309 1.00 77.50 C
ATOM 16 O2 U B 241 84.494 141.158 -2.777 1.00 76.99 O
ATOM 17 N3 U B 241 83.404 139.170 -2.847 1.00 77.86 N
ATOM 18 C4 U B 241 82.487 138.242 -2.409 1.00 76.94 C
ATOM 19 O4 U B 241 82.354 137.181 -3.025 1.00 77.67 O
ATOM 20 C5 U B 241 81.740 138.642 -1.258 1.00 76.86 C
ATOM 21 C6 U B 241 81.955 139.839 -0.708 1.00 76.22 C
ATOM 22 P C B 242 78.575 143.874 -0.211 1.00 83.60 P
ATOM 23 OP1 C B 242 77.962 145.224 -0.229 1.00 83.53 O
ATOM 24 OP2 C B 242 77.962 142.797 0.618 1.00 82.73 O
ATOM 25 O5' C B 242 78.667 143.343 -1.711 1.00 83.75 O
TER
ATOM 2 P C A 244 84.882 141.143 -9.024 1.00 90.13 P
ATOM 3 OP1 C A 244 85.093 140.433 -10.314 1.00 88.81 O
ATOM 4 OP2 C A 244 84.757 140.356 -7.769 1.00 91.21 O
ATOM 5 O5' C A 244 86.061 142.199 -8.810 1.00 88.09 O
ATOM 6 C5' C A 244 86.533 143.026 -9.893 1.00 85.02 C
ATOM 7 C4' C A 244 87.432 144.121 -9.363 1.00 83.31 C
ATOM 8 O4' C A 244 86.698 144.909 -8.389 1.00 83.35 O
ATOM 9 C3' C A 244 88.673 143.666 -8.608 1.00 82.78 C
ATOM 10 O3' C A 244 89.746 143.380 -9.494 1.00 81.34 O
ATOM 11 C2' C A 244 88.988 144.881 -7.746 1.00 83.34 C
ATOM 12 O2' C A 244 89.641 145.908 -8.464 1.00 83.61 O
ATOM 13 C1' C A 244 87.583 145.361 -7.376 1.00 83.80 C
ATOM 14 N1 C A 244 87.110 144.870 -6.065 1.00 85.21 N
ATOM 15 C2 C A 244 87.620 145.463 -4.895 1.00 85.65 C
ATOM 16 O2 C A 244 88.476 146.362 -4.994 1.00 85.45 O
ATOM 17 N3 C A 244 87.171 145.038 -3.691 1.00 85.51 N
ATOM 18 C4 C A 244 86.261 144.064 -3.622 1.00 85.17 C
ATOM 19 N4 C A 244 85.837 143.689 -2.411 1.00 85.00 N
ATOM 20 C5 C A 244 85.740 143.434 -4.790 1.00 85.13 C
ATOM 21 C6 C A 244 86.186 143.864 -5.977 1.00 85.35 C
ATOM 22 P G A 245 90.621 142.048 -9.293 1.00 82.16 P
ATOM 23 OP1 G A 245 91.828 142.199 -10.145 1.00 83.47 O
ATOM 24 OP2 G A 245 89.740 140.866 -9.470 1.00 82.19 O
ATOM 25 O5' G A 245 91.095 142.088 -7.773 1.00 81.55 O
TER
ATOM 1 O3' C B 240 81.013 139.514 4.140 1.00 66.19 O
ATOM 2 P U B 241 79.826 140.044 3.203 1.00 69.24 P
ATOM 3 OP1 U B 241 78.966 140.926 4.035 1.00 69.17 O
ATOM 4 OP2 U B 241 79.222 138.893 2.482 1.00 67.75 O
ATOM 5 O5' U B 241 80.583 140.940 2.130 1.00 71.64 O
ATOM 6 C5' U B 241 81.291 142.128 2.524 1.00 74.21 C
ATOM 7 C4' U B 241 81.918 142.778 1.317 1.00 76.20 C
ATOM 8 O4' U B 241 82.992 141.941 0.814 1.00 76.01 O
ATOM 9 C3' U B 241 80.998 142.932 0.118 1.00 78.37 C
ATOM 10 O3' U B 241 80.113 144.041 0.234 1.00 81.11 O
ATOM 11 C2' U B 241 81.991 143.066 -1.026 1.00 78.27 C
ATOM 12 O2' U B 241 82.566 144.355 -1.106 1.00 79.43 O
ATOM 13 C1' U B 241 83.064 142.061 -0.599 1.00 77.86 C
ATOM 14 N1 U B 241 82.875 140.732 -1.204 1.00 77.44 N
ATOM 15 C2 U B 241 83.651 140.408 -2.309 1.00 77.50 C
ATOM 16 O2 U B 241 84.494 141.158 -2.777 1.00 76.99 O
ATOM 17 N3 U B 241 83.404 139.170 -2.847 1.00 77.86 N
ATOM 18 C4 U B 241 82.487 138.242 -2.409 1.00 76.94 C
ATOM 19 O4 U B 241 82.354 137.181 -3.025 1.00 77.67 O
ATOM 20 C5 U B 241 81.740 138.642 -1.258 1.00 76.86 C
ATOM 21 C6 U B 241 81.955 139.839 -0.708 1.00 76.22 C
ATOM 22 P C B 242 78.575 143.874 -0.211 1.00 83.60 P
ATOM 23 OP1 C B 242 77.962 145.224 -0.229 1.00 83.53 O
ATOM 24 OP2 C B 242 77.962 142.797 0.618 1.00 82.73 O
ATOM 25 O5' C B 242 78.667 143.343 -1.711 1.00 83.75 O
TER
Atoms:
C2: (87.620,145.463,-4.895)
OP1: (85.093,140.433,-10.314)
OP2: (84.757,140.356,-7.769)
C4: (86.261,144.064,-3.622)
O5': (86.061,142.199,-8.810)
C3': (88.673,143.666,-8.608)
C1': (87.583,145.361,-7.376)
O4': (86.698,144.909,-8.389)
C5': (86.533,143.026,-9.893)
P: (84.882,141.143,-9.024)
O2: (88.476,146.362,-4.994)
C4': (87.432,144.121,-9.363)
C2': (88.988,144.881,-7.746)
O2': (89.641,145.908,-8.464)
N1: (87.110,144.870,-6.065)
N3: (87.171,145.038,-3.691)
N4: (85.837,143.689,-2.411)
C6: (86.186,143.864,-5.977)
C5: (85.740,143.434,-4.790)
O3': (89.746,143.380,-9.494)
OP1: (85.093,140.433,-10.314)
OP2: (84.757,140.356,-7.769)
C4: (86.261,144.064,-3.622)
O5': (86.061,142.199,-8.810)
C3': (88.673,143.666,-8.608)
C1': (87.583,145.361,-7.376)
O4': (86.698,144.909,-8.389)
C5': (86.533,143.026,-9.893)
P: (84.882,141.143,-9.024)
O2: (88.476,146.362,-4.994)
C4': (87.432,144.121,-9.363)
C2': (88.988,144.881,-7.746)
O2': (89.641,145.908,-8.464)
N1: (87.110,144.870,-6.065)
N3: (87.171,145.038,-3.691)
N4: (85.837,143.689,-2.411)
C6: (86.186,143.864,-5.977)
C5: (85.740,143.434,-4.790)
O3': (89.746,143.380,-9.494)
C4: (82.487,138.242,-2.409)
N3: (83.404,139.170,-2.847)
OP1: (78.966,140.926,4.035)
OP2: (79.222,138.893,2.482)
C2: (83.651,140.408,-2.309)
C1': (83.064,142.061,-0.599)
C3': (80.998,142.932,0.118)
O5': (80.583,140.940,2.130)
O4': (82.992,141.941,0.814)
C5': (81.291,142.128,2.524)
P: (79.826,140.044,3.203)
C4': (81.918,142.778,1.317)
C2': (81.991,143.066,-1.026)
O2': (82.566,144.355,-1.106)
N1: (82.875,140.732,-1.204)
O4: (82.354,137.181,-3.025)
O2: (84.494,141.158,-2.777)
C6: (81.955,139.839,-0.708)
C5: (81.740,138.642,-1.258)
O3': (80.113,144.041,0.234)
N3: (83.404,139.170,-2.847)
OP1: (78.966,140.926,4.035)
OP2: (79.222,138.893,2.482)
C2: (83.651,140.408,-2.309)
C1': (83.064,142.061,-0.599)
C3': (80.998,142.932,0.118)
O5': (80.583,140.940,2.130)
O4': (82.992,141.941,0.814)
C5': (81.291,142.128,2.524)
P: (79.826,140.044,3.203)
C4': (81.918,142.778,1.317)
C2': (81.991,143.066,-1.026)
O2': (82.566,144.355,-1.106)
N1: (82.875,140.732,-1.204)
O4: (82.354,137.181,-3.025)
O2: (84.494,141.158,-2.777)
C6: (81.955,139.839,-0.708)
C5: (81.740,138.642,-1.258)
O3': (80.113,144.041,0.234)
Image (generated by PyMOL):