ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01788:01804

Extra

PDB:
ATOM 1 O3' A A1787 106.250 138.347 93.562 1.00 35.17 O
ATOM 2 P C A1788 105.363 139.118 92.475 1.00 34.27 P
ATOM 3 OP1 C A1788 103.969 139.158 92.976 1.00 35.24 O
ATOM 4 OP2 C A1788 105.660 138.527 91.152 1.00 32.19 O
ATOM 5 O5' C A1788 105.936 140.597 92.466 1.00 35.10 O
ATOM 6 C5' C A1788 106.266 141.279 93.684 1.00 33.89 C
ATOM 7 C4' C A1788 107.051 142.528 93.366 1.00 34.16 C
ATOM 8 O4' C A1788 108.275 142.171 92.664 1.00 34.74 O
ATOM 9 C3' C A1788 106.353 143.465 92.401 1.00 34.51 C
ATOM 10 O3' C A1788 105.412 144.294 93.073 1.00 35.33 O
ATOM 11 C2' C A1788 107.511 144.257 91.822 1.00 34.06 C
ATOM 12 O2' C A1788 107.929 145.294 92.680 1.00 36.13 O
ATOM 13 C1' C A1788 108.594 143.181 91.725 1.00 32.67 C
ATOM 14 N1 C A1788 108.679 142.589 90.377 1.00 34.06 N
ATOM 15 C2 C A1788 109.273 143.353 89.357 1.00 35.27 C
ATOM 16 O2 C A1788 109.749 144.466 89.642 1.00 35.81 O
ATOM 17 N3 C A1788 109.320 142.856 88.094 1.00 34.45 N
ATOM 18 C4 C A1788 108.833 141.640 87.836 1.00 32.89 C
ATOM 19 N4 C A1788 108.914 141.198 86.582 1.00 27.90 N
ATOM 20 C5 C A1788 108.246 140.828 88.858 1.00 31.24 C
ATOM 21 C6 C A1788 108.187 141.340 90.102 1.00 32.02 C
ATOM 22 P U A1789 103.932 144.450 92.480 1.00 32.77 P
ATOM 23 OP1 U A1789 103.143 145.217 93.460 1.00 32.23 O
ATOM 24 OP2 U A1789 103.483 143.089 92.081 1.00 34.99 O
ATOM 25 O5' U A1789 104.121 145.304 91.145 1.00 30.82 O
TER

ATOM 1 O3' A B1803 104.663 135.422 80.008 1.00 31.15 O
ATOM 2 P U B1804 106.152 134.850 80.051 1.00 31.96 P
ATOM 3 OP1 U B1804 106.628 134.727 78.646 1.00 32.86 O
ATOM 4 OP2 U B1804 106.179 133.663 80.940 1.00 30.78 O
ATOM 5 O5' U B1804 106.953 136.012 80.783 1.00 33.51 O
ATOM 6 C5' U B1804 106.956 137.353 80.261 1.00 33.81 C
ATOM 7 C4' U B1804 107.573 138.292 81.265 1.00 35.18 C
ATOM 8 O4' U B1804 106.733 138.350 82.443 1.00 34.58 O
ATOM 9 C3' U B1804 108.943 137.872 81.777 1.00 35.04 C
ATOM 10 O3' U B1804 109.955 138.393 80.921 1.00 34.94 O
ATOM 11 C2' U B1804 109.005 138.550 83.139 1.00 35.00 C
ATOM 12 O2' U B1804 109.345 139.914 83.000 1.00 34.46 O
ATOM 13 C1' U B1804 107.544 138.464 83.597 1.00 35.39 C
ATOM 14 N1 U B1804 107.183 137.375 84.521 1.00 35.45 N
ATOM 15 C2 U B1804 107.134 137.670 85.870 1.00 35.12 C
ATOM 16 O2 U B1804 107.469 138.744 86.327 1.00 39.05 O
ATOM 17 N3 U B1804 106.685 136.656 86.670 1.00 34.18 N
ATOM 18 C4 U B1804 106.311 135.396 86.279 1.00 35.65 C
ATOM 19 O4 U B1804 105.846 134.623 87.117 1.00 37.04 O
ATOM 20 C5 U B1804 106.442 135.140 84.877 1.00 34.43 C
ATOM 21 C6 U B1804 106.864 136.114 84.066 1.00 34.80 C
ATOM 22 P A B1805 110.801 137.413 79.975 1.00 38.32 P
ATOM 23 OP1 A B1805 110.529 137.794 78.564 1.00 37.20 O
ATOM 24 OP2 A B1805 110.592 136.011 80.410 1.00 37.72 O
ATOM 25 O5' A B1805 112.313 137.805 80.281 1.00 37.24 O
TER

Atoms:
C2: (109.273,143.353,89.357)
OP1: (103.969,139.158,92.976)
OP2: (105.660,138.527,91.152)
C4: (108.833,141.640,87.836)
O5': (105.936,140.597,92.466)
C3': (106.353,143.465,92.401)
C1': (108.594,143.181,91.725)
O4': (108.275,142.171,92.664)
C5': (106.266,141.279,93.684)
P: (105.363,139.118,92.475)
O2: (109.749,144.466,89.642)
C4': (107.051,142.528,93.366)
C2': (107.511,144.257,91.822)
O2': (107.929,145.294,92.680)
N1: (108.679,142.589,90.377)
N3: (109.320,142.856,88.094)
N4: (108.914,141.198,86.582)
C6: (108.187,141.340,90.102)
C5: (108.246,140.828,88.858)
O3': (105.412,144.294,93.073)
C4: (106.311,135.396,86.279)
N3: (106.685,136.656,86.670)
OP1: (106.628,134.727,78.646)
OP2: (106.179,133.663,80.940)
C2: (107.134,137.670,85.870)
C1': (107.544,138.464,83.597)
C3': (108.943,137.872,81.777)
O5': (106.953,136.012,80.783)
O4': (106.733,138.350,82.443)
C5': (106.956,137.353,80.261)
P: (106.152,134.850,80.051)
C4': (107.573,138.292,81.265)
C2': (109.005,138.550,83.139)
O2': (109.345,139.914,83.000)
N1: (107.183,137.375,84.521)
O4: (105.846,134.623,87.117)
O2: (107.469,138.744,86.327)
C6: (106.864,136.114,84.066)
C5: (106.442,135.140,84.877)
O3': (109.955,138.393,80.921)
Image (generated by PyMOL):
PyMOL image
show in jmol