Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02543:02529
Extra
PDB:
ATOM 1 O3' A A2542 65.626 130.602 159.683 1.00 58.45 O
ATOM 2 P C A2543 64.816 131.876 159.141 1.00 58.05 P
ATOM 3 OP1 C A2543 64.144 131.448 157.890 1.00 59.42 O
ATOM 4 OP2 C A2543 65.732 133.042 159.117 1.00 58.30 O
ATOM 5 O5' C A2543 63.687 132.104 160.239 1.00 57.11 O
ATOM 6 C5' C A2543 62.683 131.110 160.459 1.00 56.49 C
ATOM 7 C4' C A2543 61.800 131.500 161.616 1.00 59.85 C
ATOM 8 O4' C A2543 62.560 131.489 162.850 1.00 61.02 O
ATOM 9 C3' C A2543 61.214 132.897 161.566 1.00 60.47 C
ATOM 10 O3' C A2543 60.069 132.933 160.722 1.00 61.41 O
ATOM 11 C2' C A2543 60.857 133.147 163.028 1.00 60.87 C
ATOM 12 O2' C A2543 59.637 132.548 163.413 1.00 61.66 O
ATOM 13 C1' C A2543 62.004 132.433 163.750 1.00 60.75 C
ATOM 14 N1 C A2543 63.075 133.318 164.245 1.00 61.45 N
ATOM 15 C2 C A2543 62.820 134.126 165.366 1.00 61.41 C
ATOM 16 O2 C A2543 61.699 134.083 165.899 1.00 61.39 O
ATOM 17 N3 C A2543 63.799 134.927 165.837 1.00 61.83 N
ATOM 18 C4 C A2543 64.994 134.943 165.241 1.00 62.64 C
ATOM 19 N4 C A2543 65.936 135.739 165.753 1.00 62.99 N
ATOM 20 C5 C A2543 65.278 134.139 164.098 1.00 61.87 C
ATOM 21 C6 C A2543 64.301 133.352 163.637 1.00 61.15 C
ATOM 22 P U A2544 59.810 134.208 159.782 1.00 61.64 P
ATOM 23 OP1 U A2544 58.415 134.120 159.266 1.00 61.05 O
ATOM 24 OP2 U A2544 60.947 134.304 158.828 1.00 60.01 O
ATOM 25 O5' U A2544 59.889 135.440 160.787 1.00 61.90 O
TER
ATOM 1 O3' A B2528 72.190 142.679 167.602 1.00 62.75 O
ATOM 2 P U B2529 72.908 141.364 168.185 1.00 65.27 P
ATOM 3 OP1 U B2529 73.248 141.625 169.608 1.00 67.58 O
ATOM 4 OP2 U B2529 73.988 140.981 167.239 1.00 63.90 O
ATOM 5 O5' U B2529 71.769 140.248 168.123 1.00 64.45 O
ATOM 6 C5' U B2529 70.473 140.480 168.715 1.00 64.71 C
ATOM 7 C4' U B2529 69.513 139.371 168.341 1.00 66.22 C
ATOM 8 O4' U B2529 69.219 139.424 166.919 1.00 65.67 O
ATOM 9 C3' U B2529 70.003 137.949 168.562 1.00 66.80 C
ATOM 10 O3' U B2529 69.863 137.548 169.922 1.00 68.19 O
ATOM 11 C2' U B2529 69.105 137.150 167.621 1.00 65.73 C
ATOM 12 O2' U B2529 67.816 136.902 168.148 1.00 65.13 O
ATOM 13 C1' U B2529 68.989 138.108 166.431 1.00 64.71 C
ATOM 14 N1 U B2529 69.960 137.813 165.361 1.00 62.92 N
ATOM 15 C2 U B2529 69.577 136.923 164.374 1.00 60.23 C
ATOM 16 O2 U B2529 68.479 136.410 164.338 1.00 59.36 O
ATOM 17 N3 U B2529 70.534 136.653 163.431 1.00 60.57 N
ATOM 18 C4 U B2529 71.810 137.165 163.368 1.00 61.14 C
ATOM 19 O4 U B2529 72.590 136.739 162.514 1.00 61.58 O
ATOM 20 C5 U B2529 72.130 138.094 164.405 1.00 61.54 C
ATOM 21 C6 U B2529 71.218 138.382 165.343 1.00 63.35 C
ATOM 22 P A B2530 70.938 136.544 170.578 1.00 69.01 P
ATOM 23 OP1 A B2530 70.927 135.240 169.867 1.00 68.63 O
ATOM 24 OP2 A B2530 70.696 136.584 172.040 1.00 70.04 O
ATOM 25 O5' A B2530 72.348 137.223 170.297 1.00 68.81 O
TER
ATOM 2 P C A2543 64.816 131.876 159.141 1.00 58.05 P
ATOM 3 OP1 C A2543 64.144 131.448 157.890 1.00 59.42 O
ATOM 4 OP2 C A2543 65.732 133.042 159.117 1.00 58.30 O
ATOM 5 O5' C A2543 63.687 132.104 160.239 1.00 57.11 O
ATOM 6 C5' C A2543 62.683 131.110 160.459 1.00 56.49 C
ATOM 7 C4' C A2543 61.800 131.500 161.616 1.00 59.85 C
ATOM 8 O4' C A2543 62.560 131.489 162.850 1.00 61.02 O
ATOM 9 C3' C A2543 61.214 132.897 161.566 1.00 60.47 C
ATOM 10 O3' C A2543 60.069 132.933 160.722 1.00 61.41 O
ATOM 11 C2' C A2543 60.857 133.147 163.028 1.00 60.87 C
ATOM 12 O2' C A2543 59.637 132.548 163.413 1.00 61.66 O
ATOM 13 C1' C A2543 62.004 132.433 163.750 1.00 60.75 C
ATOM 14 N1 C A2543 63.075 133.318 164.245 1.00 61.45 N
ATOM 15 C2 C A2543 62.820 134.126 165.366 1.00 61.41 C
ATOM 16 O2 C A2543 61.699 134.083 165.899 1.00 61.39 O
ATOM 17 N3 C A2543 63.799 134.927 165.837 1.00 61.83 N
ATOM 18 C4 C A2543 64.994 134.943 165.241 1.00 62.64 C
ATOM 19 N4 C A2543 65.936 135.739 165.753 1.00 62.99 N
ATOM 20 C5 C A2543 65.278 134.139 164.098 1.00 61.87 C
ATOM 21 C6 C A2543 64.301 133.352 163.637 1.00 61.15 C
ATOM 22 P U A2544 59.810 134.208 159.782 1.00 61.64 P
ATOM 23 OP1 U A2544 58.415 134.120 159.266 1.00 61.05 O
ATOM 24 OP2 U A2544 60.947 134.304 158.828 1.00 60.01 O
ATOM 25 O5' U A2544 59.889 135.440 160.787 1.00 61.90 O
TER
ATOM 1 O3' A B2528 72.190 142.679 167.602 1.00 62.75 O
ATOM 2 P U B2529 72.908 141.364 168.185 1.00 65.27 P
ATOM 3 OP1 U B2529 73.248 141.625 169.608 1.00 67.58 O
ATOM 4 OP2 U B2529 73.988 140.981 167.239 1.00 63.90 O
ATOM 5 O5' U B2529 71.769 140.248 168.123 1.00 64.45 O
ATOM 6 C5' U B2529 70.473 140.480 168.715 1.00 64.71 C
ATOM 7 C4' U B2529 69.513 139.371 168.341 1.00 66.22 C
ATOM 8 O4' U B2529 69.219 139.424 166.919 1.00 65.67 O
ATOM 9 C3' U B2529 70.003 137.949 168.562 1.00 66.80 C
ATOM 10 O3' U B2529 69.863 137.548 169.922 1.00 68.19 O
ATOM 11 C2' U B2529 69.105 137.150 167.621 1.00 65.73 C
ATOM 12 O2' U B2529 67.816 136.902 168.148 1.00 65.13 O
ATOM 13 C1' U B2529 68.989 138.108 166.431 1.00 64.71 C
ATOM 14 N1 U B2529 69.960 137.813 165.361 1.00 62.92 N
ATOM 15 C2 U B2529 69.577 136.923 164.374 1.00 60.23 C
ATOM 16 O2 U B2529 68.479 136.410 164.338 1.00 59.36 O
ATOM 17 N3 U B2529 70.534 136.653 163.431 1.00 60.57 N
ATOM 18 C4 U B2529 71.810 137.165 163.368 1.00 61.14 C
ATOM 19 O4 U B2529 72.590 136.739 162.514 1.00 61.58 O
ATOM 20 C5 U B2529 72.130 138.094 164.405 1.00 61.54 C
ATOM 21 C6 U B2529 71.218 138.382 165.343 1.00 63.35 C
ATOM 22 P A B2530 70.938 136.544 170.578 1.00 69.01 P
ATOM 23 OP1 A B2530 70.927 135.240 169.867 1.00 68.63 O
ATOM 24 OP2 A B2530 70.696 136.584 172.040 1.00 70.04 O
ATOM 25 O5' A B2530 72.348 137.223 170.297 1.00 68.81 O
TER
Atoms:
C2: (62.820,134.126,165.366)
OP1: (64.144,131.448,157.890)
OP2: (65.732,133.042,159.117)
C4: (64.994,134.943,165.241)
O5': (63.687,132.104,160.239)
C3': (61.214,132.897,161.566)
C1': (62.004,132.433,163.750)
O4': (62.560,131.489,162.850)
C5': (62.683,131.110,160.459)
P: (64.816,131.876,159.141)
O2: (61.699,134.083,165.899)
C4': (61.800,131.500,161.616)
C2': (60.857,133.147,163.028)
O2': (59.637,132.548,163.413)
N1: (63.075,133.318,164.245)
N3: (63.799,134.927,165.837)
N4: (65.936,135.739,165.753)
C6: (64.301,133.352,163.637)
C5: (65.278,134.139,164.098)
O3': (60.069,132.933,160.722)
OP1: (64.144,131.448,157.890)
OP2: (65.732,133.042,159.117)
C4: (64.994,134.943,165.241)
O5': (63.687,132.104,160.239)
C3': (61.214,132.897,161.566)
C1': (62.004,132.433,163.750)
O4': (62.560,131.489,162.850)
C5': (62.683,131.110,160.459)
P: (64.816,131.876,159.141)
O2: (61.699,134.083,165.899)
C4': (61.800,131.500,161.616)
C2': (60.857,133.147,163.028)
O2': (59.637,132.548,163.413)
N1: (63.075,133.318,164.245)
N3: (63.799,134.927,165.837)
N4: (65.936,135.739,165.753)
C6: (64.301,133.352,163.637)
C5: (65.278,134.139,164.098)
O3': (60.069,132.933,160.722)
C4: (71.810,137.165,163.368)
N3: (70.534,136.653,163.431)
OP1: (73.248,141.625,169.608)
OP2: (73.988,140.981,167.239)
C2: (69.577,136.923,164.374)
C1': (68.989,138.108,166.431)
C3': (70.003,137.949,168.562)
O5': (71.769,140.248,168.123)
O4': (69.219,139.424,166.919)
C5': (70.473,140.480,168.715)
P: (72.908,141.364,168.185)
C4': (69.513,139.371,168.341)
C2': (69.105,137.150,167.621)
O2': (67.816,136.902,168.148)
N1: (69.960,137.813,165.361)
O4: (72.590,136.739,162.514)
O2: (68.479,136.410,164.338)
C6: (71.218,138.382,165.343)
C5: (72.130,138.094,164.405)
O3': (69.863,137.548,169.922)
N3: (70.534,136.653,163.431)
OP1: (73.248,141.625,169.608)
OP2: (73.988,140.981,167.239)
C2: (69.577,136.923,164.374)
C1': (68.989,138.108,166.431)
C3': (70.003,137.949,168.562)
O5': (71.769,140.248,168.123)
O4': (69.219,139.424,166.919)
C5': (70.473,140.480,168.715)
P: (72.908,141.364,168.185)
C4': (69.513,139.371,168.341)
C2': (69.105,137.150,167.621)
O2': (67.816,136.902,168.148)
N1: (69.960,137.813,165.361)
O4: (72.590,136.739,162.514)
O2: (68.479,136.410,164.338)
C6: (71.218,138.382,165.343)
C5: (72.130,138.094,164.405)
O3': (69.863,137.548,169.922)
Image (generated by PyMOL):