Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01788:01804
Extra
PDB:
ATOM 1 O3' A A1787 106.459 138.173 93.442 1.00 36.66 O
ATOM 2 P C A1788 105.606 138.923 92.321 1.00 35.74 P
ATOM 3 OP1 C A1788 104.192 139.002 92.754 1.00 35.79 O
ATOM 4 OP2 C A1788 105.948 138.304 91.022 1.00 32.49 O
ATOM 5 O5' C A1788 106.205 140.389 92.315 1.00 37.33 O
ATOM 6 C5' C A1788 106.472 141.087 93.538 1.00 36.20 C
ATOM 7 C4' C A1788 107.244 142.349 93.242 1.00 36.38 C
ATOM 8 O4' C A1788 108.500 142.009 92.588 1.00 35.48 O
ATOM 9 C3' C A1788 106.567 143.285 92.259 1.00 35.48 C
ATOM 10 O3' C A1788 105.599 144.098 92.911 1.00 35.25 O
ATOM 11 C2' C A1788 107.744 144.086 91.728 1.00 34.65 C
ATOM 12 O2' C A1788 108.161 145.082 92.634 1.00 36.85 O
ATOM 13 C1' C A1788 108.826 143.009 91.643 1.00 33.09 C
ATOM 14 N1 C A1788 108.911 142.403 90.304 1.00 32.64 N
ATOM 15 C2 C A1788 109.465 143.166 89.271 1.00 34.47 C
ATOM 16 O2 C A1788 109.909 144.296 89.535 1.00 36.78 O
ATOM 17 N3 C A1788 109.512 142.653 88.014 1.00 32.82 N
ATOM 18 C4 C A1788 109.058 141.420 87.781 1.00 29.74 C
ATOM 19 N4 C A1788 109.135 140.963 86.539 1.00 26.07 N
ATOM 20 C5 C A1788 108.509 140.608 88.818 1.00 29.42 C
ATOM 21 C6 C A1788 108.453 141.136 90.055 1.00 31.54 C
ATOM 22 P U A1789 104.135 144.252 92.279 1.00 34.44 P
ATOM 23 OP1 U A1789 103.313 145.031 93.232 1.00 33.59 O
ATOM 24 OP2 U A1789 103.699 142.897 91.878 1.00 37.29 O
ATOM 25 O5' U A1789 104.353 145.105 90.949 1.00 31.18 O
TER
ATOM 1 O3' A B1803 104.878 135.218 79.878 1.00 31.46 O
ATOM 2 P U B1804 106.374 134.666 79.930 1.00 32.25 P
ATOM 3 OP1 U B1804 106.886 134.561 78.540 1.00 33.65 O
ATOM 4 OP2 U B1804 106.398 133.477 80.811 1.00 32.42 O
ATOM 5 O5' U B1804 107.160 135.827 80.677 1.00 35.03 O
ATOM 6 C5' U B1804 107.147 137.171 80.167 1.00 35.50 C
ATOM 7 C4' U B1804 107.778 138.103 81.166 1.00 35.68 C
ATOM 8 O4' U B1804 106.953 138.156 82.353 1.00 35.23 O
ATOM 9 C3' U B1804 109.152 137.680 81.656 1.00 35.58 C
ATOM 10 O3' U B1804 110.154 138.182 80.769 1.00 36.12 O
ATOM 11 C2' U B1804 109.230 138.360 83.020 1.00 36.32 C
ATOM 12 O2' U B1804 109.562 139.727 82.895 1.00 36.89 O
ATOM 13 C1' U B1804 107.775 138.281 83.495 1.00 35.10 C
ATOM 14 N1 U B1804 107.419 137.208 84.437 1.00 34.21 N
ATOM 15 C2 U B1804 107.436 137.501 85.785 1.00 34.47 C
ATOM 16 O2 U B1804 107.819 138.560 86.230 1.00 37.62 O
ATOM 17 N3 U B1804 106.991 136.501 86.599 1.00 34.07 N
ATOM 18 C4 U B1804 106.561 135.255 86.221 1.00 34.79 C
ATOM 19 O4 U B1804 106.106 134.492 87.072 1.00 36.02 O
ATOM 20 C5 U B1804 106.623 135.004 84.819 1.00 33.87 C
ATOM 21 C6 U B1804 107.041 135.965 83.995 1.00 34.50 C
ATOM 22 P A B1805 111.005 137.172 79.845 1.00 37.90 P
ATOM 23 OP1 A B1805 110.756 137.511 78.420 1.00 35.50 O
ATOM 24 OP2 A B1805 110.803 135.785 80.312 1.00 38.73 O
ATOM 25 O5' A B1805 112.513 137.563 80.155 1.00 37.45 O
TER
ATOM 2 P C A1788 105.606 138.923 92.321 1.00 35.74 P
ATOM 3 OP1 C A1788 104.192 139.002 92.754 1.00 35.79 O
ATOM 4 OP2 C A1788 105.948 138.304 91.022 1.00 32.49 O
ATOM 5 O5' C A1788 106.205 140.389 92.315 1.00 37.33 O
ATOM 6 C5' C A1788 106.472 141.087 93.538 1.00 36.20 C
ATOM 7 C4' C A1788 107.244 142.349 93.242 1.00 36.38 C
ATOM 8 O4' C A1788 108.500 142.009 92.588 1.00 35.48 O
ATOM 9 C3' C A1788 106.567 143.285 92.259 1.00 35.48 C
ATOM 10 O3' C A1788 105.599 144.098 92.911 1.00 35.25 O
ATOM 11 C2' C A1788 107.744 144.086 91.728 1.00 34.65 C
ATOM 12 O2' C A1788 108.161 145.082 92.634 1.00 36.85 O
ATOM 13 C1' C A1788 108.826 143.009 91.643 1.00 33.09 C
ATOM 14 N1 C A1788 108.911 142.403 90.304 1.00 32.64 N
ATOM 15 C2 C A1788 109.465 143.166 89.271 1.00 34.47 C
ATOM 16 O2 C A1788 109.909 144.296 89.535 1.00 36.78 O
ATOM 17 N3 C A1788 109.512 142.653 88.014 1.00 32.82 N
ATOM 18 C4 C A1788 109.058 141.420 87.781 1.00 29.74 C
ATOM 19 N4 C A1788 109.135 140.963 86.539 1.00 26.07 N
ATOM 20 C5 C A1788 108.509 140.608 88.818 1.00 29.42 C
ATOM 21 C6 C A1788 108.453 141.136 90.055 1.00 31.54 C
ATOM 22 P U A1789 104.135 144.252 92.279 1.00 34.44 P
ATOM 23 OP1 U A1789 103.313 145.031 93.232 1.00 33.59 O
ATOM 24 OP2 U A1789 103.699 142.897 91.878 1.00 37.29 O
ATOM 25 O5' U A1789 104.353 145.105 90.949 1.00 31.18 O
TER
ATOM 1 O3' A B1803 104.878 135.218 79.878 1.00 31.46 O
ATOM 2 P U B1804 106.374 134.666 79.930 1.00 32.25 P
ATOM 3 OP1 U B1804 106.886 134.561 78.540 1.00 33.65 O
ATOM 4 OP2 U B1804 106.398 133.477 80.811 1.00 32.42 O
ATOM 5 O5' U B1804 107.160 135.827 80.677 1.00 35.03 O
ATOM 6 C5' U B1804 107.147 137.171 80.167 1.00 35.50 C
ATOM 7 C4' U B1804 107.778 138.103 81.166 1.00 35.68 C
ATOM 8 O4' U B1804 106.953 138.156 82.353 1.00 35.23 O
ATOM 9 C3' U B1804 109.152 137.680 81.656 1.00 35.58 C
ATOM 10 O3' U B1804 110.154 138.182 80.769 1.00 36.12 O
ATOM 11 C2' U B1804 109.230 138.360 83.020 1.00 36.32 C
ATOM 12 O2' U B1804 109.562 139.727 82.895 1.00 36.89 O
ATOM 13 C1' U B1804 107.775 138.281 83.495 1.00 35.10 C
ATOM 14 N1 U B1804 107.419 137.208 84.437 1.00 34.21 N
ATOM 15 C2 U B1804 107.436 137.501 85.785 1.00 34.47 C
ATOM 16 O2 U B1804 107.819 138.560 86.230 1.00 37.62 O
ATOM 17 N3 U B1804 106.991 136.501 86.599 1.00 34.07 N
ATOM 18 C4 U B1804 106.561 135.255 86.221 1.00 34.79 C
ATOM 19 O4 U B1804 106.106 134.492 87.072 1.00 36.02 O
ATOM 20 C5 U B1804 106.623 135.004 84.819 1.00 33.87 C
ATOM 21 C6 U B1804 107.041 135.965 83.995 1.00 34.50 C
ATOM 22 P A B1805 111.005 137.172 79.845 1.00 37.90 P
ATOM 23 OP1 A B1805 110.756 137.511 78.420 1.00 35.50 O
ATOM 24 OP2 A B1805 110.803 135.785 80.312 1.00 38.73 O
ATOM 25 O5' A B1805 112.513 137.563 80.155 1.00 37.45 O
TER
Atoms:
C2: (109.465,143.166,89.271)
OP1: (104.192,139.002,92.754)
OP2: (105.948,138.304,91.022)
C4: (109.058,141.420,87.781)
O5': (106.205,140.389,92.315)
C3': (106.567,143.285,92.259)
C1': (108.826,143.009,91.643)
O4': (108.500,142.009,92.588)
C5': (106.472,141.087,93.538)
P: (105.606,138.923,92.321)
O2: (109.909,144.296,89.535)
C4': (107.244,142.349,93.242)
C2': (107.744,144.086,91.728)
O2': (108.161,145.082,92.634)
N1: (108.911,142.403,90.304)
N3: (109.512,142.653,88.014)
N4: (109.135,140.963,86.539)
C6: (108.453,141.136,90.055)
C5: (108.509,140.608,88.818)
O3': (105.599,144.098,92.911)
OP1: (104.192,139.002,92.754)
OP2: (105.948,138.304,91.022)
C4: (109.058,141.420,87.781)
O5': (106.205,140.389,92.315)
C3': (106.567,143.285,92.259)
C1': (108.826,143.009,91.643)
O4': (108.500,142.009,92.588)
C5': (106.472,141.087,93.538)
P: (105.606,138.923,92.321)
O2: (109.909,144.296,89.535)
C4': (107.244,142.349,93.242)
C2': (107.744,144.086,91.728)
O2': (108.161,145.082,92.634)
N1: (108.911,142.403,90.304)
N3: (109.512,142.653,88.014)
N4: (109.135,140.963,86.539)
C6: (108.453,141.136,90.055)
C5: (108.509,140.608,88.818)
O3': (105.599,144.098,92.911)
C4: (106.561,135.255,86.221)
N3: (106.991,136.501,86.599)
OP1: (106.886,134.561,78.540)
OP2: (106.398,133.477,80.811)
C2: (107.436,137.501,85.785)
C1': (107.775,138.281,83.495)
C3': (109.152,137.680,81.656)
O5': (107.160,135.827,80.677)
O4': (106.953,138.156,82.353)
C5': (107.147,137.171,80.167)
P: (106.374,134.666,79.930)
C4': (107.778,138.103,81.166)
C2': (109.230,138.360,83.020)
O2': (109.562,139.727,82.895)
N1: (107.419,137.208,84.437)
O4: (106.106,134.492,87.072)
O2: (107.819,138.560,86.230)
C6: (107.041,135.965,83.995)
C5: (106.623,135.004,84.819)
O3': (110.154,138.182,80.769)
N3: (106.991,136.501,86.599)
OP1: (106.886,134.561,78.540)
OP2: (106.398,133.477,80.811)
C2: (107.436,137.501,85.785)
C1': (107.775,138.281,83.495)
C3': (109.152,137.680,81.656)
O5': (107.160,135.827,80.677)
O4': (106.953,138.156,82.353)
C5': (107.147,137.171,80.167)
P: (106.374,134.666,79.930)
C4': (107.778,138.103,81.166)
C2': (109.230,138.360,83.020)
O2': (109.562,139.727,82.895)
N1: (107.419,137.208,84.437)
O4: (106.106,134.492,87.072)
O2: (107.819,138.560,86.230)
C6: (107.041,135.965,83.995)
C5: (106.623,135.004,84.819)
O3': (110.154,138.182,80.769)
Image (generated by PyMOL):