Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02543:02529
Extra
PDB:
ATOM 1 O3' A A2542 65.802 130.480 159.398 1.00 59.19 O
ATOM 2 P C A2543 64.878 131.741 159.038 1.00 60.65 P
ATOM 3 OP1 C A2543 64.094 131.379 157.827 1.00 60.34 O
ATOM 4 OP2 C A2543 65.729 132.959 159.025 1.00 60.14 O
ATOM 5 O5' C A2543 63.863 131.830 160.260 1.00 58.38 O
ATOM 6 C5' C A2543 62.843 130.841 160.430 1.00 58.35 C
ATOM 7 C4' C A2543 61.901 131.251 161.530 1.00 59.89 C
ATOM 8 O4' C A2543 62.595 131.226 162.800 1.00 60.68 O
ATOM 9 C3' C A2543 61.359 132.663 161.429 1.00 59.85 C
ATOM 10 O3' C A2543 60.244 132.705 160.551 1.00 61.62 O
ATOM 11 C2' C A2543 60.968 132.966 162.871 1.00 59.83 C
ATOM 12 O2' C A2543 59.718 132.419 163.237 1.00 58.91 O
ATOM 13 C1' C A2543 62.069 132.236 163.644 1.00 60.42 C
ATOM 14 N1 C A2543 63.175 133.089 164.114 1.00 61.13 N
ATOM 15 C2 C A2543 62.982 133.866 165.264 1.00 61.41 C
ATOM 16 O2 C A2543 61.877 133.838 165.835 1.00 60.92 O
ATOM 17 N3 C A2543 64.001 134.624 165.725 1.00 62.39 N
ATOM 18 C4 C A2543 65.175 134.624 165.088 1.00 62.49 C
ATOM 19 N4 C A2543 66.163 135.370 165.595 1.00 62.82 N
ATOM 20 C5 C A2543 65.392 133.857 163.907 1.00 61.30 C
ATOM 21 C6 C A2543 64.376 133.114 163.458 1.00 60.49 C
ATOM 22 P U A2544 60.001 133.994 159.627 1.00 62.46 P
ATOM 23 OP1 U A2544 58.600 133.936 159.126 1.00 62.41 O
ATOM 24 OP2 U A2544 61.133 134.069 158.662 1.00 61.45 O
ATOM 25 O5' U A2544 60.104 135.217 160.639 1.00 61.26 O
TER
ATOM 1 O3' A B2528 72.394 142.346 167.404 1.00 61.73 O
ATOM 2 P U B2529 73.103 141.023 167.969 1.00 63.57 P
ATOM 3 OP1 U B2529 73.460 141.265 169.390 1.00 65.85 O
ATOM 4 OP2 U B2529 74.169 140.657 167.005 1.00 63.32 O
ATOM 5 O5' U B2529 71.955 139.918 167.896 1.00 63.75 O
ATOM 6 C5' U B2529 70.659 140.155 168.488 1.00 64.17 C
ATOM 7 C4' U B2529 69.704 139.036 168.139 1.00 65.55 C
ATOM 8 O4' U B2529 69.380 139.078 166.725 1.00 65.87 O
ATOM 9 C3' U B2529 70.210 137.619 168.353 1.00 66.09 C
ATOM 10 O3' U B2529 70.104 137.208 169.707 1.00 67.35 O
ATOM 11 C2' U B2529 69.294 136.810 167.444 1.00 66.16 C
ATOM 12 O2' U B2529 68.024 136.558 168.012 1.00 65.79 O
ATOM 13 C1' U B2529 69.148 137.757 166.249 1.00 65.29 C
ATOM 14 N1 U B2529 70.114 137.455 165.180 1.00 63.81 N
ATOM 15 C2 U B2529 69.718 136.587 164.178 1.00 62.65 C
ATOM 16 O2 U B2529 68.608 136.087 164.133 1.00 61.44 O
ATOM 17 N3 U B2529 70.675 136.322 163.230 1.00 62.77 N
ATOM 18 C4 U B2529 71.961 136.820 163.179 1.00 62.96 C
ATOM 19 O4 U B2529 72.737 136.409 162.315 1.00 63.70 O
ATOM 20 C5 U B2529 72.290 137.720 164.236 1.00 63.70 C
ATOM 21 C6 U B2529 71.380 138.001 165.176 1.00 64.86 C
ATOM 22 P A B2530 71.199 136.206 170.321 1.00 68.27 P
ATOM 23 OP1 A B2530 71.245 134.960 169.518 1.00 67.48 O
ATOM 24 OP2 A B2530 70.925 136.129 171.773 1.00 68.86 O
ATOM 25 O5' A B2530 72.579 136.968 170.109 1.00 67.24 O
TER
ATOM 2 P C A2543 64.878 131.741 159.038 1.00 60.65 P
ATOM 3 OP1 C A2543 64.094 131.379 157.827 1.00 60.34 O
ATOM 4 OP2 C A2543 65.729 132.959 159.025 1.00 60.14 O
ATOM 5 O5' C A2543 63.863 131.830 160.260 1.00 58.38 O
ATOM 6 C5' C A2543 62.843 130.841 160.430 1.00 58.35 C
ATOM 7 C4' C A2543 61.901 131.251 161.530 1.00 59.89 C
ATOM 8 O4' C A2543 62.595 131.226 162.800 1.00 60.68 O
ATOM 9 C3' C A2543 61.359 132.663 161.429 1.00 59.85 C
ATOM 10 O3' C A2543 60.244 132.705 160.551 1.00 61.62 O
ATOM 11 C2' C A2543 60.968 132.966 162.871 1.00 59.83 C
ATOM 12 O2' C A2543 59.718 132.419 163.237 1.00 58.91 O
ATOM 13 C1' C A2543 62.069 132.236 163.644 1.00 60.42 C
ATOM 14 N1 C A2543 63.175 133.089 164.114 1.00 61.13 N
ATOM 15 C2 C A2543 62.982 133.866 165.264 1.00 61.41 C
ATOM 16 O2 C A2543 61.877 133.838 165.835 1.00 60.92 O
ATOM 17 N3 C A2543 64.001 134.624 165.725 1.00 62.39 N
ATOM 18 C4 C A2543 65.175 134.624 165.088 1.00 62.49 C
ATOM 19 N4 C A2543 66.163 135.370 165.595 1.00 62.82 N
ATOM 20 C5 C A2543 65.392 133.857 163.907 1.00 61.30 C
ATOM 21 C6 C A2543 64.376 133.114 163.458 1.00 60.49 C
ATOM 22 P U A2544 60.001 133.994 159.627 1.00 62.46 P
ATOM 23 OP1 U A2544 58.600 133.936 159.126 1.00 62.41 O
ATOM 24 OP2 U A2544 61.133 134.069 158.662 1.00 61.45 O
ATOM 25 O5' U A2544 60.104 135.217 160.639 1.00 61.26 O
TER
ATOM 1 O3' A B2528 72.394 142.346 167.404 1.00 61.73 O
ATOM 2 P U B2529 73.103 141.023 167.969 1.00 63.57 P
ATOM 3 OP1 U B2529 73.460 141.265 169.390 1.00 65.85 O
ATOM 4 OP2 U B2529 74.169 140.657 167.005 1.00 63.32 O
ATOM 5 O5' U B2529 71.955 139.918 167.896 1.00 63.75 O
ATOM 6 C5' U B2529 70.659 140.155 168.488 1.00 64.17 C
ATOM 7 C4' U B2529 69.704 139.036 168.139 1.00 65.55 C
ATOM 8 O4' U B2529 69.380 139.078 166.725 1.00 65.87 O
ATOM 9 C3' U B2529 70.210 137.619 168.353 1.00 66.09 C
ATOM 10 O3' U B2529 70.104 137.208 169.707 1.00 67.35 O
ATOM 11 C2' U B2529 69.294 136.810 167.444 1.00 66.16 C
ATOM 12 O2' U B2529 68.024 136.558 168.012 1.00 65.79 O
ATOM 13 C1' U B2529 69.148 137.757 166.249 1.00 65.29 C
ATOM 14 N1 U B2529 70.114 137.455 165.180 1.00 63.81 N
ATOM 15 C2 U B2529 69.718 136.587 164.178 1.00 62.65 C
ATOM 16 O2 U B2529 68.608 136.087 164.133 1.00 61.44 O
ATOM 17 N3 U B2529 70.675 136.322 163.230 1.00 62.77 N
ATOM 18 C4 U B2529 71.961 136.820 163.179 1.00 62.96 C
ATOM 19 O4 U B2529 72.737 136.409 162.315 1.00 63.70 O
ATOM 20 C5 U B2529 72.290 137.720 164.236 1.00 63.70 C
ATOM 21 C6 U B2529 71.380 138.001 165.176 1.00 64.86 C
ATOM 22 P A B2530 71.199 136.206 170.321 1.00 68.27 P
ATOM 23 OP1 A B2530 71.245 134.960 169.518 1.00 67.48 O
ATOM 24 OP2 A B2530 70.925 136.129 171.773 1.00 68.86 O
ATOM 25 O5' A B2530 72.579 136.968 170.109 1.00 67.24 O
TER
Atoms:
C2: (62.982,133.866,165.264)
OP1: (64.094,131.379,157.827)
OP2: (65.729,132.959,159.025)
C4: (65.175,134.624,165.088)
O5': (63.863,131.830,160.260)
C3': (61.359,132.663,161.429)
C1': (62.069,132.236,163.644)
O4': (62.595,131.226,162.800)
C5': (62.843,130.841,160.430)
P: (64.878,131.741,159.038)
O2: (61.877,133.838,165.835)
C4': (61.901,131.251,161.530)
C2': (60.968,132.966,162.871)
O2': (59.718,132.419,163.237)
N1: (63.175,133.089,164.114)
N3: (64.001,134.624,165.725)
N4: (66.163,135.370,165.595)
C6: (64.376,133.114,163.458)
C5: (65.392,133.857,163.907)
O3': (60.244,132.705,160.551)
OP1: (64.094,131.379,157.827)
OP2: (65.729,132.959,159.025)
C4: (65.175,134.624,165.088)
O5': (63.863,131.830,160.260)
C3': (61.359,132.663,161.429)
C1': (62.069,132.236,163.644)
O4': (62.595,131.226,162.800)
C5': (62.843,130.841,160.430)
P: (64.878,131.741,159.038)
O2: (61.877,133.838,165.835)
C4': (61.901,131.251,161.530)
C2': (60.968,132.966,162.871)
O2': (59.718,132.419,163.237)
N1: (63.175,133.089,164.114)
N3: (64.001,134.624,165.725)
N4: (66.163,135.370,165.595)
C6: (64.376,133.114,163.458)
C5: (65.392,133.857,163.907)
O3': (60.244,132.705,160.551)
C4: (71.961,136.820,163.179)
N3: (70.675,136.322,163.230)
OP1: (73.460,141.265,169.390)
OP2: (74.169,140.657,167.005)
C2: (69.718,136.587,164.178)
C1': (69.148,137.757,166.249)
C3': (70.210,137.619,168.353)
O5': (71.955,139.918,167.896)
O4': (69.380,139.078,166.725)
C5': (70.659,140.155,168.488)
P: (73.103,141.023,167.969)
C4': (69.704,139.036,168.139)
C2': (69.294,136.810,167.444)
O2': (68.024,136.558,168.012)
N1: (70.114,137.455,165.180)
O4: (72.737,136.409,162.315)
O2: (68.608,136.087,164.133)
C6: (71.380,138.001,165.176)
C5: (72.290,137.720,164.236)
O3': (70.104,137.208,169.707)
N3: (70.675,136.322,163.230)
OP1: (73.460,141.265,169.390)
OP2: (74.169,140.657,167.005)
C2: (69.718,136.587,164.178)
C1': (69.148,137.757,166.249)
C3': (70.210,137.619,168.353)
O5': (71.955,139.918,167.896)
O4': (69.380,139.078,166.725)
C5': (70.659,140.155,168.488)
P: (73.103,141.023,167.969)
C4': (69.704,139.036,168.139)
C2': (69.294,136.810,167.444)
O2': (68.024,136.558,168.012)
N1: (70.114,137.455,165.180)
O4: (72.737,136.409,162.315)
O2: (68.608,136.087,164.133)
C6: (71.380,138.001,165.176)
C5: (72.290,137.720,164.236)
O3': (70.104,137.208,169.707)
Image (generated by PyMOL):