Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01788:01804
Extra
PDB:
ATOM 1 O3' A A1787 106.644 138.500 93.931 1.00 42.52 O
ATOM 2 P C A1788 105.765 139.278 92.859 1.00 41.29 P
ATOM 3 OP1 C A1788 104.380 139.353 93.374 1.00 43.03 O
ATOM 4 OP2 C A1788 106.027 138.668 91.544 1.00 42.71 O
ATOM 5 O5' C A1788 106.387 140.733 92.840 1.00 40.54 O
ATOM 6 C5' C A1788 106.634 141.442 94.057 1.00 39.79 C
ATOM 7 C4' C A1788 107.304 142.753 93.746 1.00 39.26 C
ATOM 8 O4' C A1788 108.582 142.502 93.093 1.00 36.93 O
ATOM 9 C3' C A1788 106.535 143.620 92.768 1.00 38.65 C
ATOM 10 O3' C A1788 105.538 144.381 93.468 1.00 40.96 O
ATOM 11 C2' C A1788 107.646 144.479 92.174 1.00 36.90 C
ATOM 12 O2' C A1788 108.001 145.544 93.024 1.00 40.47 O
ATOM 13 C1' C A1788 108.816 143.489 92.117 1.00 33.57 C
ATOM 14 N1 C A1788 108.949 142.838 90.807 1.00 32.73 N
ATOM 15 C2 C A1788 109.550 143.551 89.774 1.00 34.86 C
ATOM 16 O2 C A1788 110.074 144.644 90.025 1.00 37.34 O
ATOM 17 N3 C A1788 109.567 143.027 88.528 1.00 35.58 N
ATOM 18 C4 C A1788 109.064 141.815 88.310 1.00 32.82 C
ATOM 19 N4 C A1788 109.099 141.349 87.062 1.00 33.23 N
ATOM 20 C5 C A1788 108.506 141.033 89.359 1.00 30.84 C
ATOM 21 C6 C A1788 108.466 141.580 90.582 1.00 31.02 C
ATOM 22 P U A1789 104.058 144.550 92.853 1.00 41.36 P
ATOM 23 OP1 U A1789 103.288 145.428 93.760 1.00 39.73 O
ATOM 24 OP2 U A1789 103.556 143.182 92.563 1.00 42.45 O
ATOM 25 O5' U A1789 104.267 145.370 91.498 1.00 39.43 O
TER
ATOM 1 O3' A B1803 105.082 135.619 80.362 1.00 41.23 O
ATOM 2 P U B1804 106.567 135.017 80.365 1.00 44.87 P
ATOM 3 OP1 U B1804 107.046 134.910 78.957 1.00 43.41 O
ATOM 4 OP2 U B1804 106.586 133.813 81.240 1.00 41.64 O
ATOM 5 O5' U B1804 107.403 136.161 81.083 1.00 45.01 O
ATOM 6 C5' U B1804 107.427 137.495 80.554 1.00 44.72 C
ATOM 7 C4' U B1804 108.003 138.441 81.577 1.00 44.47 C
ATOM 8 O4' U B1804 107.130 138.501 82.733 1.00 45.94 O
ATOM 9 C3' U B1804 109.352 138.026 82.129 1.00 42.77 C
ATOM 10 O3' U B1804 110.367 138.509 81.264 1.00 43.28 O
ATOM 11 C2' U B1804 109.377 138.733 83.481 1.00 44.81 C
ATOM 12 O2' U B1804 109.698 140.105 83.372 1.00 44.30 O
ATOM 13 C1' U B1804 107.908 138.639 83.907 1.00 45.15 C
ATOM 14 N1 U B1804 107.562 137.543 84.828 1.00 44.70 N
ATOM 15 C2 U B1804 107.537 137.828 86.170 1.00 45.15 C
ATOM 16 O2 U B1804 107.840 138.910 86.619 1.00 49.31 O
ATOM 17 N3 U B1804 107.150 136.795 86.974 1.00 44.44 N
ATOM 18 C4 U B1804 106.806 135.530 86.587 1.00 43.67 C
ATOM 19 O4 U B1804 106.376 134.741 87.428 1.00 45.70 O
ATOM 20 C5 U B1804 106.891 135.296 85.187 1.00 43.04 C
ATOM 21 C6 U B1804 107.255 136.285 84.374 1.00 43.96 C
ATOM 22 P A B1805 111.179 137.495 80.313 1.00 46.04 P
ATOM 23 OP1 A B1805 110.935 137.869 78.898 1.00 43.55 O
ATOM 24 OP2 A B1805 110.946 136.098 80.750 1.00 44.51 O
ATOM 25 O5' A B1805 112.695 137.879 80.610 1.00 45.96 O
TER
ATOM 2 P C A1788 105.765 139.278 92.859 1.00 41.29 P
ATOM 3 OP1 C A1788 104.380 139.353 93.374 1.00 43.03 O
ATOM 4 OP2 C A1788 106.027 138.668 91.544 1.00 42.71 O
ATOM 5 O5' C A1788 106.387 140.733 92.840 1.00 40.54 O
ATOM 6 C5' C A1788 106.634 141.442 94.057 1.00 39.79 C
ATOM 7 C4' C A1788 107.304 142.753 93.746 1.00 39.26 C
ATOM 8 O4' C A1788 108.582 142.502 93.093 1.00 36.93 O
ATOM 9 C3' C A1788 106.535 143.620 92.768 1.00 38.65 C
ATOM 10 O3' C A1788 105.538 144.381 93.468 1.00 40.96 O
ATOM 11 C2' C A1788 107.646 144.479 92.174 1.00 36.90 C
ATOM 12 O2' C A1788 108.001 145.544 93.024 1.00 40.47 O
ATOM 13 C1' C A1788 108.816 143.489 92.117 1.00 33.57 C
ATOM 14 N1 C A1788 108.949 142.838 90.807 1.00 32.73 N
ATOM 15 C2 C A1788 109.550 143.551 89.774 1.00 34.86 C
ATOM 16 O2 C A1788 110.074 144.644 90.025 1.00 37.34 O
ATOM 17 N3 C A1788 109.567 143.027 88.528 1.00 35.58 N
ATOM 18 C4 C A1788 109.064 141.815 88.310 1.00 32.82 C
ATOM 19 N4 C A1788 109.099 141.349 87.062 1.00 33.23 N
ATOM 20 C5 C A1788 108.506 141.033 89.359 1.00 30.84 C
ATOM 21 C6 C A1788 108.466 141.580 90.582 1.00 31.02 C
ATOM 22 P U A1789 104.058 144.550 92.853 1.00 41.36 P
ATOM 23 OP1 U A1789 103.288 145.428 93.760 1.00 39.73 O
ATOM 24 OP2 U A1789 103.556 143.182 92.563 1.00 42.45 O
ATOM 25 O5' U A1789 104.267 145.370 91.498 1.00 39.43 O
TER
ATOM 1 O3' A B1803 105.082 135.619 80.362 1.00 41.23 O
ATOM 2 P U B1804 106.567 135.017 80.365 1.00 44.87 P
ATOM 3 OP1 U B1804 107.046 134.910 78.957 1.00 43.41 O
ATOM 4 OP2 U B1804 106.586 133.813 81.240 1.00 41.64 O
ATOM 5 O5' U B1804 107.403 136.161 81.083 1.00 45.01 O
ATOM 6 C5' U B1804 107.427 137.495 80.554 1.00 44.72 C
ATOM 7 C4' U B1804 108.003 138.441 81.577 1.00 44.47 C
ATOM 8 O4' U B1804 107.130 138.501 82.733 1.00 45.94 O
ATOM 9 C3' U B1804 109.352 138.026 82.129 1.00 42.77 C
ATOM 10 O3' U B1804 110.367 138.509 81.264 1.00 43.28 O
ATOM 11 C2' U B1804 109.377 138.733 83.481 1.00 44.81 C
ATOM 12 O2' U B1804 109.698 140.105 83.372 1.00 44.30 O
ATOM 13 C1' U B1804 107.908 138.639 83.907 1.00 45.15 C
ATOM 14 N1 U B1804 107.562 137.543 84.828 1.00 44.70 N
ATOM 15 C2 U B1804 107.537 137.828 86.170 1.00 45.15 C
ATOM 16 O2 U B1804 107.840 138.910 86.619 1.00 49.31 O
ATOM 17 N3 U B1804 107.150 136.795 86.974 1.00 44.44 N
ATOM 18 C4 U B1804 106.806 135.530 86.587 1.00 43.67 C
ATOM 19 O4 U B1804 106.376 134.741 87.428 1.00 45.70 O
ATOM 20 C5 U B1804 106.891 135.296 85.187 1.00 43.04 C
ATOM 21 C6 U B1804 107.255 136.285 84.374 1.00 43.96 C
ATOM 22 P A B1805 111.179 137.495 80.313 1.00 46.04 P
ATOM 23 OP1 A B1805 110.935 137.869 78.898 1.00 43.55 O
ATOM 24 OP2 A B1805 110.946 136.098 80.750 1.00 44.51 O
ATOM 25 O5' A B1805 112.695 137.879 80.610 1.00 45.96 O
TER
Atoms:
C2: (109.550,143.551,89.774)
OP1: (104.380,139.353,93.374)
OP2: (106.027,138.668,91.544)
C4: (109.064,141.815,88.310)
O5': (106.387,140.733,92.840)
C3': (106.535,143.620,92.768)
C1': (108.816,143.489,92.117)
O4': (108.582,142.502,93.093)
C5': (106.634,141.442,94.057)
P: (105.765,139.278,92.859)
O2: (110.074,144.644,90.025)
C4': (107.304,142.753,93.746)
C2': (107.646,144.479,92.174)
O2': (108.001,145.544,93.024)
N1: (108.949,142.838,90.807)
N3: (109.567,143.027,88.528)
N4: (109.099,141.349,87.062)
C6: (108.466,141.580,90.582)
C5: (108.506,141.033,89.359)
O3': (105.538,144.381,93.468)
OP1: (104.380,139.353,93.374)
OP2: (106.027,138.668,91.544)
C4: (109.064,141.815,88.310)
O5': (106.387,140.733,92.840)
C3': (106.535,143.620,92.768)
C1': (108.816,143.489,92.117)
O4': (108.582,142.502,93.093)
C5': (106.634,141.442,94.057)
P: (105.765,139.278,92.859)
O2: (110.074,144.644,90.025)
C4': (107.304,142.753,93.746)
C2': (107.646,144.479,92.174)
O2': (108.001,145.544,93.024)
N1: (108.949,142.838,90.807)
N3: (109.567,143.027,88.528)
N4: (109.099,141.349,87.062)
C6: (108.466,141.580,90.582)
C5: (108.506,141.033,89.359)
O3': (105.538,144.381,93.468)
C4: (106.806,135.530,86.587)
N3: (107.150,136.795,86.974)
OP1: (107.046,134.910,78.957)
OP2: (106.586,133.813,81.240)
C2: (107.537,137.828,86.170)
C1': (107.908,138.639,83.907)
C3': (109.352,138.026,82.129)
O5': (107.403,136.161,81.083)
O4': (107.130,138.501,82.733)
C5': (107.427,137.495,80.554)
P: (106.567,135.017,80.365)
C4': (108.003,138.441,81.577)
C2': (109.377,138.733,83.481)
O2': (109.698,140.105,83.372)
N1: (107.562,137.543,84.828)
O4: (106.376,134.741,87.428)
O2: (107.840,138.910,86.619)
C6: (107.255,136.285,84.374)
C5: (106.891,135.296,85.187)
O3': (110.367,138.509,81.264)
N3: (107.150,136.795,86.974)
OP1: (107.046,134.910,78.957)
OP2: (106.586,133.813,81.240)
C2: (107.537,137.828,86.170)
C1': (107.908,138.639,83.907)
C3': (109.352,138.026,82.129)
O5': (107.403,136.161,81.083)
O4': (107.130,138.501,82.733)
C5': (107.427,137.495,80.554)
P: (106.567,135.017,80.365)
C4': (108.003,138.441,81.577)
C2': (109.377,138.733,83.481)
O2': (109.698,140.105,83.372)
N1: (107.562,137.543,84.828)
O4: (106.376,134.741,87.428)
O2: (107.840,138.910,86.619)
C6: (107.255,136.285,84.374)
C5: (106.891,135.296,85.187)
O3': (110.367,138.509,81.264)
Image (generated by PyMOL):