Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01788:01804
Extra
PDB:
ATOM 1 O3' A A1787 106.362 138.285 93.519 1.00 44.23 O
ATOM 2 P C A1788 105.501 139.047 92.412 1.00 42.82 P
ATOM 3 OP1 C A1788 104.095 139.115 92.876 1.00 42.67 O
ATOM 4 OP2 C A1788 105.820 138.440 91.104 1.00 41.78 O
ATOM 5 O5' C A1788 106.105 140.512 92.414 1.00 42.42 O
ATOM 6 C5' C A1788 106.366 141.202 93.641 1.00 40.49 C
ATOM 7 C4' C A1788 107.107 142.477 93.351 1.00 39.97 C
ATOM 8 O4' C A1788 108.351 142.153 92.676 1.00 37.40 O
ATOM 9 C3' C A1788 106.392 143.398 92.379 1.00 39.79 C
ATOM 10 O3' C A1788 105.408 144.194 93.038 1.00 39.17 O
ATOM 11 C2' C A1788 107.538 144.211 91.795 1.00 38.11 C
ATOM 12 O2' C A1788 107.928 145.291 92.615 1.00 39.52 O
ATOM 13 C1' C A1788 108.652 143.160 91.731 1.00 35.91 C
ATOM 14 N1 C A1788 108.764 142.552 90.403 1.00 33.90 N
ATOM 15 C2 C A1788 109.286 143.326 89.379 1.00 36.61 C
ATOM 16 O2 C A1788 109.701 144.465 89.651 1.00 39.91 O
ATOM 17 N3 C A1788 109.341 142.821 88.119 1.00 35.67 N
ATOM 18 C4 C A1788 108.925 141.578 87.885 1.00 32.18 C
ATOM 19 N4 C A1788 109.004 141.126 86.641 1.00 28.49 N
ATOM 20 C5 C A1788 108.415 140.749 88.923 1.00 33.06 C
ATOM 21 C6 C A1788 108.352 141.272 90.159 1.00 33.84 C
ATOM 22 P U A1789 103.943 144.338 92.394 1.00 39.71 P
ATOM 23 OP1 U A1789 103.091 145.107 93.338 1.00 38.65 O
ATOM 24 OP2 U A1789 103.521 142.985 91.970 1.00 41.04 O
ATOM 25 O5' U A1789 104.169 145.214 91.082 1.00 36.68 O
TER
ATOM 1 O3' A B1803 104.762 135.334 79.929 1.00 35.57 O
ATOM 2 P U B1804 106.271 134.806 80.015 1.00 38.41 P
ATOM 3 OP1 U B1804 106.841 134.715 78.647 1.00 37.22 O
ATOM 4 OP2 U B1804 106.276 133.607 80.894 1.00 35.94 O
ATOM 5 O5' U B1804 107.025 135.980 80.774 1.00 38.15 O
ATOM 6 C5' U B1804 107.037 137.318 80.248 1.00 38.80 C
ATOM 7 C4' U B1804 107.648 138.257 81.256 1.00 39.90 C
ATOM 8 O4' U B1804 106.800 138.305 82.432 1.00 40.96 O
ATOM 9 C3' U B1804 109.015 137.839 81.772 1.00 40.28 C
ATOM 10 O3' U B1804 110.037 138.330 80.898 1.00 40.02 O
ATOM 11 C2' U B1804 109.060 138.507 83.145 1.00 41.64 C
ATOM 12 O2' U B1804 109.366 139.883 83.054 1.00 43.30 O
ATOM 13 C1' U B1804 107.598 138.404 83.596 1.00 40.79 C
ATOM 14 N1 U B1804 107.245 137.287 84.489 1.00 41.27 N
ATOM 15 C2 U B1804 107.265 137.509 85.855 1.00 42.27 C
ATOM 16 O2 U B1804 107.622 138.552 86.357 1.00 45.16 O
ATOM 17 N3 U B1804 106.854 136.452 86.619 1.00 42.97 N
ATOM 18 C4 U B1804 106.450 135.215 86.176 1.00 43.94 C
ATOM 19 O4 U B1804 106.049 134.379 86.991 1.00 45.38 O
ATOM 20 C5 U B1804 106.492 135.050 84.760 1.00 43.45 C
ATOM 21 C6 U B1804 106.879 136.065 83.986 1.00 42.11 C
ATOM 22 P A B1805 110.867 137.313 79.960 1.00 42.80 P
ATOM 23 OP1 A B1805 110.543 137.581 78.532 1.00 39.73 O
ATOM 24 OP2 A B1805 110.740 135.938 80.495 1.00 41.83 O
ATOM 25 O5' A B1805 112.378 137.753 80.172 1.00 42.42 O
TER
ATOM 2 P C A1788 105.501 139.047 92.412 1.00 42.82 P
ATOM 3 OP1 C A1788 104.095 139.115 92.876 1.00 42.67 O
ATOM 4 OP2 C A1788 105.820 138.440 91.104 1.00 41.78 O
ATOM 5 O5' C A1788 106.105 140.512 92.414 1.00 42.42 O
ATOM 6 C5' C A1788 106.366 141.202 93.641 1.00 40.49 C
ATOM 7 C4' C A1788 107.107 142.477 93.351 1.00 39.97 C
ATOM 8 O4' C A1788 108.351 142.153 92.676 1.00 37.40 O
ATOM 9 C3' C A1788 106.392 143.398 92.379 1.00 39.79 C
ATOM 10 O3' C A1788 105.408 144.194 93.038 1.00 39.17 O
ATOM 11 C2' C A1788 107.538 144.211 91.795 1.00 38.11 C
ATOM 12 O2' C A1788 107.928 145.291 92.615 1.00 39.52 O
ATOM 13 C1' C A1788 108.652 143.160 91.731 1.00 35.91 C
ATOM 14 N1 C A1788 108.764 142.552 90.403 1.00 33.90 N
ATOM 15 C2 C A1788 109.286 143.326 89.379 1.00 36.61 C
ATOM 16 O2 C A1788 109.701 144.465 89.651 1.00 39.91 O
ATOM 17 N3 C A1788 109.341 142.821 88.119 1.00 35.67 N
ATOM 18 C4 C A1788 108.925 141.578 87.885 1.00 32.18 C
ATOM 19 N4 C A1788 109.004 141.126 86.641 1.00 28.49 N
ATOM 20 C5 C A1788 108.415 140.749 88.923 1.00 33.06 C
ATOM 21 C6 C A1788 108.352 141.272 90.159 1.00 33.84 C
ATOM 22 P U A1789 103.943 144.338 92.394 1.00 39.71 P
ATOM 23 OP1 U A1789 103.091 145.107 93.338 1.00 38.65 O
ATOM 24 OP2 U A1789 103.521 142.985 91.970 1.00 41.04 O
ATOM 25 O5' U A1789 104.169 145.214 91.082 1.00 36.68 O
TER
ATOM 1 O3' A B1803 104.762 135.334 79.929 1.00 35.57 O
ATOM 2 P U B1804 106.271 134.806 80.015 1.00 38.41 P
ATOM 3 OP1 U B1804 106.841 134.715 78.647 1.00 37.22 O
ATOM 4 OP2 U B1804 106.276 133.607 80.894 1.00 35.94 O
ATOM 5 O5' U B1804 107.025 135.980 80.774 1.00 38.15 O
ATOM 6 C5' U B1804 107.037 137.318 80.248 1.00 38.80 C
ATOM 7 C4' U B1804 107.648 138.257 81.256 1.00 39.90 C
ATOM 8 O4' U B1804 106.800 138.305 82.432 1.00 40.96 O
ATOM 9 C3' U B1804 109.015 137.839 81.772 1.00 40.28 C
ATOM 10 O3' U B1804 110.037 138.330 80.898 1.00 40.02 O
ATOM 11 C2' U B1804 109.060 138.507 83.145 1.00 41.64 C
ATOM 12 O2' U B1804 109.366 139.883 83.054 1.00 43.30 O
ATOM 13 C1' U B1804 107.598 138.404 83.596 1.00 40.79 C
ATOM 14 N1 U B1804 107.245 137.287 84.489 1.00 41.27 N
ATOM 15 C2 U B1804 107.265 137.509 85.855 1.00 42.27 C
ATOM 16 O2 U B1804 107.622 138.552 86.357 1.00 45.16 O
ATOM 17 N3 U B1804 106.854 136.452 86.619 1.00 42.97 N
ATOM 18 C4 U B1804 106.450 135.215 86.176 1.00 43.94 C
ATOM 19 O4 U B1804 106.049 134.379 86.991 1.00 45.38 O
ATOM 20 C5 U B1804 106.492 135.050 84.760 1.00 43.45 C
ATOM 21 C6 U B1804 106.879 136.065 83.986 1.00 42.11 C
ATOM 22 P A B1805 110.867 137.313 79.960 1.00 42.80 P
ATOM 23 OP1 A B1805 110.543 137.581 78.532 1.00 39.73 O
ATOM 24 OP2 A B1805 110.740 135.938 80.495 1.00 41.83 O
ATOM 25 O5' A B1805 112.378 137.753 80.172 1.00 42.42 O
TER
Atoms:
C2: (109.286,143.326,89.379)
OP1: (104.095,139.115,92.876)
OP2: (105.820,138.440,91.104)
C4: (108.925,141.578,87.885)
O5': (106.105,140.512,92.414)
C3': (106.392,143.398,92.379)
C1': (108.652,143.160,91.731)
O4': (108.351,142.153,92.676)
C5': (106.366,141.202,93.641)
P: (105.501,139.047,92.412)
O2: (109.701,144.465,89.651)
C4': (107.107,142.477,93.351)
C2': (107.538,144.211,91.795)
O2': (107.928,145.291,92.615)
N1: (108.764,142.552,90.403)
N3: (109.341,142.821,88.119)
N4: (109.004,141.126,86.641)
C6: (108.352,141.272,90.159)
C5: (108.415,140.749,88.923)
O3': (105.408,144.194,93.038)
OP1: (104.095,139.115,92.876)
OP2: (105.820,138.440,91.104)
C4: (108.925,141.578,87.885)
O5': (106.105,140.512,92.414)
C3': (106.392,143.398,92.379)
C1': (108.652,143.160,91.731)
O4': (108.351,142.153,92.676)
C5': (106.366,141.202,93.641)
P: (105.501,139.047,92.412)
O2: (109.701,144.465,89.651)
C4': (107.107,142.477,93.351)
C2': (107.538,144.211,91.795)
O2': (107.928,145.291,92.615)
N1: (108.764,142.552,90.403)
N3: (109.341,142.821,88.119)
N4: (109.004,141.126,86.641)
C6: (108.352,141.272,90.159)
C5: (108.415,140.749,88.923)
O3': (105.408,144.194,93.038)
C4: (106.450,135.215,86.176)
N3: (106.854,136.452,86.619)
OP1: (106.841,134.715,78.647)
OP2: (106.276,133.607,80.894)
C2: (107.265,137.509,85.855)
C1': (107.598,138.404,83.596)
C3': (109.015,137.839,81.772)
O5': (107.025,135.980,80.774)
O4': (106.800,138.305,82.432)
C5': (107.037,137.318,80.248)
P: (106.271,134.806,80.015)
C4': (107.648,138.257,81.256)
C2': (109.060,138.507,83.145)
O2': (109.366,139.883,83.054)
N1: (107.245,137.287,84.489)
O4: (106.049,134.379,86.991)
O2: (107.622,138.552,86.357)
C6: (106.879,136.065,83.986)
C5: (106.492,135.050,84.760)
O3': (110.037,138.330,80.898)
N3: (106.854,136.452,86.619)
OP1: (106.841,134.715,78.647)
OP2: (106.276,133.607,80.894)
C2: (107.265,137.509,85.855)
C1': (107.598,138.404,83.596)
C3': (109.015,137.839,81.772)
O5': (107.025,135.980,80.774)
O4': (106.800,138.305,82.432)
C5': (107.037,137.318,80.248)
P: (106.271,134.806,80.015)
C4': (107.648,138.257,81.256)
C2': (109.060,138.507,83.145)
O2': (109.366,139.883,83.054)
N1: (107.245,137.287,84.489)
O4: (106.049,134.379,86.991)
O2: (107.622,138.552,86.357)
C6: (106.879,136.065,83.986)
C5: (106.492,135.050,84.760)
O3': (110.037,138.330,80.898)
Image (generated by PyMOL):