Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0216:0199
Extra
PDB:
ATOM 1 O3' A A 215 66.374 96.217 30.502 1.00 44.51 O
ATOM 2 P C A 216 65.267 96.266 29.335 1.00 45.26 P
ATOM 3 OP1 C A 216 65.754 97.142 28.258 1.00 45.90 O
ATOM 4 OP2 C A 216 63.951 96.546 29.956 1.00 46.29 O
ATOM 5 O5' C A 216 65.244 94.784 28.754 1.00 46.85 O
ATOM 6 C5' C A 216 66.376 94.248 28.048 1.00 47.62 C
ATOM 7 C4' C A 216 66.111 92.814 27.641 1.00 49.93 C
ATOM 8 O4' C A 216 65.980 91.985 28.825 1.00 48.64 O
ATOM 9 C3' C A 216 64.819 92.555 26.878 1.00 50.36 C
ATOM 10 O3' C A 216 64.912 92.862 25.491 1.00 51.01 O
ATOM 11 C2' C A 216 64.608 91.068 27.115 1.00 50.09 C
ATOM 12 O2' C A 216 65.417 90.261 26.291 1.00 51.12 O
ATOM 13 C1' C A 216 65.066 90.931 28.566 1.00 50.25 C
ATOM 14 N1 C A 216 63.929 91.045 29.489 1.00 52.07 N
ATOM 15 C2 C A 216 63.347 89.876 29.990 1.00 53.14 C
ATOM 16 O2 C A 216 63.839 88.772 29.688 1.00 52.66 O
ATOM 17 N3 C A 216 62.263 89.975 30.793 1.00 54.64 N
ATOM 18 C4 C A 216 61.768 91.174 31.106 1.00 53.76 C
ATOM 19 N4 C A 216 60.685 91.217 31.878 1.00 53.48 N
ATOM 20 C5 C A 216 62.358 92.377 30.635 1.00 53.74 C
ATOM 21 C6 C A 216 63.427 92.269 29.838 1.00 53.75 C
ATOM 22 P G A 217 63.645 93.500 24.737 1.00 52.40 P
ATOM 23 OP1 G A 217 63.933 93.503 23.284 1.00 53.45 O
ATOM 24 OP2 G A 217 63.280 94.763 25.416 1.00 53.49 O
ATOM 25 O5' G A 217 62.459 92.475 25.002 1.00 52.91 O
TER
ATOM 1 O3' U B 198 52.335 93.410 36.343 1.00 42.17 O
ATOM 2 P U B 199 53.263 92.719 37.467 1.00 42.25 P
ATOM 3 OP1 U B 199 52.429 91.668 38.095 1.00 42.16 O
ATOM 4 OP2 U B 199 53.870 93.757 38.324 1.00 43.62 O
ATOM 5 O5' U B 199 54.443 92.034 36.645 1.00 41.28 O
ATOM 6 C5' U B 199 54.183 90.945 35.744 1.00 41.34 C
ATOM 7 C4' U B 199 55.418 90.622 34.940 1.00 42.01 C
ATOM 8 O4' U B 199 55.749 91.740 34.077 1.00 42.70 O
ATOM 9 C3' U B 199 56.677 90.359 35.746 1.00 41.02 C
ATOM 10 O3' U B 199 56.715 88.999 36.161 1.00 42.99 O
ATOM 11 C2' U B 199 57.772 90.687 34.741 1.00 42.36 C
ATOM 12 O2' U B 199 58.013 89.637 33.832 1.00 43.29 O
ATOM 13 C1' U B 199 57.154 91.869 33.987 1.00 43.00 C
ATOM 14 N1 U B 199 57.538 93.174 34.550 1.00 45.44 N
ATOM 15 C2 U B 199 58.716 93.731 34.119 1.00 45.71 C
ATOM 16 O2 U B 199 59.425 93.200 33.292 1.00 48.38 O
ATOM 17 N3 U B 199 59.041 94.931 34.698 1.00 45.98 N
ATOM 18 C4 U B 199 58.325 95.612 35.651 1.00 45.44 C
ATOM 19 O4 U B 199 58.793 96.638 36.137 1.00 46.57 O
ATOM 20 C5 U B 199 57.106 94.985 36.038 1.00 45.86 C
ATOM 21 C6 U B 199 56.759 93.819 35.489 1.00 46.47 C
ATOM 22 P A B 200 57.587 88.568 37.443 1.00 45.50 P
ATOM 23 OP1 A B 200 58.997 88.939 37.164 1.00 45.17 O
ATOM 24 OP2 A B 200 57.261 87.159 37.797 1.00 45.51 O
ATOM 25 O5' A B 200 57.025 89.497 38.607 1.00 46.25 O
TER
ATOM 2 P C A 216 65.267 96.266 29.335 1.00 45.26 P
ATOM 3 OP1 C A 216 65.754 97.142 28.258 1.00 45.90 O
ATOM 4 OP2 C A 216 63.951 96.546 29.956 1.00 46.29 O
ATOM 5 O5' C A 216 65.244 94.784 28.754 1.00 46.85 O
ATOM 6 C5' C A 216 66.376 94.248 28.048 1.00 47.62 C
ATOM 7 C4' C A 216 66.111 92.814 27.641 1.00 49.93 C
ATOM 8 O4' C A 216 65.980 91.985 28.825 1.00 48.64 O
ATOM 9 C3' C A 216 64.819 92.555 26.878 1.00 50.36 C
ATOM 10 O3' C A 216 64.912 92.862 25.491 1.00 51.01 O
ATOM 11 C2' C A 216 64.608 91.068 27.115 1.00 50.09 C
ATOM 12 O2' C A 216 65.417 90.261 26.291 1.00 51.12 O
ATOM 13 C1' C A 216 65.066 90.931 28.566 1.00 50.25 C
ATOM 14 N1 C A 216 63.929 91.045 29.489 1.00 52.07 N
ATOM 15 C2 C A 216 63.347 89.876 29.990 1.00 53.14 C
ATOM 16 O2 C A 216 63.839 88.772 29.688 1.00 52.66 O
ATOM 17 N3 C A 216 62.263 89.975 30.793 1.00 54.64 N
ATOM 18 C4 C A 216 61.768 91.174 31.106 1.00 53.76 C
ATOM 19 N4 C A 216 60.685 91.217 31.878 1.00 53.48 N
ATOM 20 C5 C A 216 62.358 92.377 30.635 1.00 53.74 C
ATOM 21 C6 C A 216 63.427 92.269 29.838 1.00 53.75 C
ATOM 22 P G A 217 63.645 93.500 24.737 1.00 52.40 P
ATOM 23 OP1 G A 217 63.933 93.503 23.284 1.00 53.45 O
ATOM 24 OP2 G A 217 63.280 94.763 25.416 1.00 53.49 O
ATOM 25 O5' G A 217 62.459 92.475 25.002 1.00 52.91 O
TER
ATOM 1 O3' U B 198 52.335 93.410 36.343 1.00 42.17 O
ATOM 2 P U B 199 53.263 92.719 37.467 1.00 42.25 P
ATOM 3 OP1 U B 199 52.429 91.668 38.095 1.00 42.16 O
ATOM 4 OP2 U B 199 53.870 93.757 38.324 1.00 43.62 O
ATOM 5 O5' U B 199 54.443 92.034 36.645 1.00 41.28 O
ATOM 6 C5' U B 199 54.183 90.945 35.744 1.00 41.34 C
ATOM 7 C4' U B 199 55.418 90.622 34.940 1.00 42.01 C
ATOM 8 O4' U B 199 55.749 91.740 34.077 1.00 42.70 O
ATOM 9 C3' U B 199 56.677 90.359 35.746 1.00 41.02 C
ATOM 10 O3' U B 199 56.715 88.999 36.161 1.00 42.99 O
ATOM 11 C2' U B 199 57.772 90.687 34.741 1.00 42.36 C
ATOM 12 O2' U B 199 58.013 89.637 33.832 1.00 43.29 O
ATOM 13 C1' U B 199 57.154 91.869 33.987 1.00 43.00 C
ATOM 14 N1 U B 199 57.538 93.174 34.550 1.00 45.44 N
ATOM 15 C2 U B 199 58.716 93.731 34.119 1.00 45.71 C
ATOM 16 O2 U B 199 59.425 93.200 33.292 1.00 48.38 O
ATOM 17 N3 U B 199 59.041 94.931 34.698 1.00 45.98 N
ATOM 18 C4 U B 199 58.325 95.612 35.651 1.00 45.44 C
ATOM 19 O4 U B 199 58.793 96.638 36.137 1.00 46.57 O
ATOM 20 C5 U B 199 57.106 94.985 36.038 1.00 45.86 C
ATOM 21 C6 U B 199 56.759 93.819 35.489 1.00 46.47 C
ATOM 22 P A B 200 57.587 88.568 37.443 1.00 45.50 P
ATOM 23 OP1 A B 200 58.997 88.939 37.164 1.00 45.17 O
ATOM 24 OP2 A B 200 57.261 87.159 37.797 1.00 45.51 O
ATOM 25 O5' A B 200 57.025 89.497 38.607 1.00 46.25 O
TER
Atoms:
C2: (63.347,89.876,29.990)
OP1: (65.754,97.142,28.258)
OP2: (63.951,96.546,29.956)
C4: (61.768,91.174,31.106)
O5': (65.244,94.784,28.754)
C3': (64.819,92.555,26.878)
C1': (65.066,90.931,28.566)
O4': (65.980,91.985,28.825)
C5': (66.376,94.248,28.048)
P: (65.267,96.266,29.335)
O2: (63.839,88.772,29.688)
C4': (66.111,92.814,27.641)
C2': (64.608,91.068,27.115)
O2': (65.417,90.261,26.291)
N1: (63.929,91.045,29.489)
N3: (62.263,89.975,30.793)
N4: (60.685,91.217,31.878)
C6: (63.427,92.269,29.838)
C5: (62.358,92.377,30.635)
O3': (64.912,92.862,25.491)
OP1: (65.754,97.142,28.258)
OP2: (63.951,96.546,29.956)
C4: (61.768,91.174,31.106)
O5': (65.244,94.784,28.754)
C3': (64.819,92.555,26.878)
C1': (65.066,90.931,28.566)
O4': (65.980,91.985,28.825)
C5': (66.376,94.248,28.048)
P: (65.267,96.266,29.335)
O2: (63.839,88.772,29.688)
C4': (66.111,92.814,27.641)
C2': (64.608,91.068,27.115)
O2': (65.417,90.261,26.291)
N1: (63.929,91.045,29.489)
N3: (62.263,89.975,30.793)
N4: (60.685,91.217,31.878)
C6: (63.427,92.269,29.838)
C5: (62.358,92.377,30.635)
O3': (64.912,92.862,25.491)
C4: (58.325,95.612,35.651)
N3: (59.041,94.931,34.698)
OP1: (52.429,91.668,38.095)
OP2: (53.870,93.757,38.324)
C2: (58.716,93.731,34.119)
C1': (57.154,91.869,33.987)
C3': (56.677,90.359,35.746)
O5': (54.443,92.034,36.645)
O4': (55.749,91.740,34.077)
C5': (54.183,90.945,35.744)
P: (53.263,92.719,37.467)
C4': (55.418,90.622,34.940)
C2': (57.772,90.687,34.741)
O2': (58.013,89.637,33.832)
N1: (57.538,93.174,34.550)
O4: (58.793,96.638,36.137)
O2: (59.425,93.200,33.292)
C6: (56.759,93.819,35.489)
C5: (57.106,94.985,36.038)
O3': (56.715,88.999,36.161)
N3: (59.041,94.931,34.698)
OP1: (52.429,91.668,38.095)
OP2: (53.870,93.757,38.324)
C2: (58.716,93.731,34.119)
C1': (57.154,91.869,33.987)
C3': (56.677,90.359,35.746)
O5': (54.443,92.034,36.645)
O4': (55.749,91.740,34.077)
C5': (54.183,90.945,35.744)
P: (53.263,92.719,37.467)
C4': (55.418,90.622,34.940)
C2': (57.772,90.687,34.741)
O2': (58.013,89.637,33.832)
N1: (57.538,93.174,34.550)
O4: (58.793,96.638,36.137)
O2: (59.425,93.200,33.292)
C6: (56.759,93.819,35.489)
C5: (57.106,94.985,36.038)
O3': (56.715,88.999,36.161)
Image (generated by PyMOL):