Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02543:02529
Extra
PDB:
ATOM 1 O3' A A2542 65.669 130.611 159.574 1.00 66.43 O
ATOM 2 P C A2543 64.774 131.872 159.151 1.00 68.24 P
ATOM 3 OP1 C A2543 64.038 131.506 157.914 1.00 68.22 O
ATOM 4 OP2 C A2543 65.653 133.070 159.155 1.00 68.69 O
ATOM 5 O5' C A2543 63.705 132.001 160.321 1.00 66.62 O
ATOM 6 C5' C A2543 62.668 131.023 160.473 1.00 66.49 C
ATOM 7 C4' C A2543 61.739 131.420 161.591 1.00 67.27 C
ATOM 8 O4' C A2543 62.443 131.375 162.857 1.00 68.08 O
ATOM 9 C3' C A2543 61.211 132.839 161.518 1.00 67.39 C
ATOM 10 O3' C A2543 60.102 132.915 160.633 1.00 69.24 O
ATOM 11 C2' C A2543 60.824 133.115 162.966 1.00 66.67 C
ATOM 12 O2' C A2543 59.579 132.560 163.334 1.00 66.79 O
ATOM 13 C1' C A2543 61.928 132.375 163.721 1.00 66.81 C
ATOM 14 N1 C A2543 63.032 133.242 164.170 1.00 66.75 N
ATOM 15 C2 C A2543 62.812 134.092 165.257 1.00 66.98 C
ATOM 16 O2 C A2543 61.699 134.089 165.810 1.00 67.45 O
ATOM 17 N3 C A2543 63.812 134.893 165.680 1.00 66.69 N
ATOM 18 C4 C A2543 64.994 134.863 165.066 1.00 66.71 C
ATOM 19 N4 C A2543 65.953 135.667 165.523 1.00 68.04 N
ATOM 20 C5 C A2543 65.247 134.007 163.959 1.00 66.42 C
ATOM 21 C6 C A2543 64.248 133.222 163.547 1.00 66.55 C
ATOM 22 P U A2544 59.872 134.239 159.756 1.00 70.11 P
ATOM 23 OP1 U A2544 58.472 134.212 159.255 1.00 69.09 O
ATOM 24 OP2 U A2544 61.001 134.344 158.796 1.00 69.63 O
ATOM 25 O5' U A2544 59.993 135.421 160.810 1.00 68.11 O
TER
ATOM 1 O3' A B2528 72.218 142.571 167.538 1.00 71.78 O
ATOM 2 P U B2529 72.954 141.273 168.134 1.00 73.34 P
ATOM 3 OP1 U B2529 73.275 141.563 169.554 1.00 74.46 O
ATOM 4 OP2 U B2529 74.055 140.920 167.201 1.00 72.81 O
ATOM 5 O5' U B2529 71.835 140.134 168.064 1.00 72.26 O
ATOM 6 C5' U B2529 70.530 140.347 168.646 1.00 71.01 C
ATOM 7 C4' U B2529 69.591 139.210 168.301 1.00 71.56 C
ATOM 8 O4' U B2529 69.260 139.231 166.887 1.00 71.55 O
ATOM 9 C3' U B2529 70.101 137.796 168.525 1.00 71.80 C
ATOM 10 O3' U B2529 70.011 137.405 169.883 1.00 72.58 O
ATOM 11 C2' U B2529 69.153 136.983 167.655 1.00 71.71 C
ATOM 12 O2' U B2529 67.889 136.801 168.263 1.00 71.45 O
ATOM 13 C1' U B2529 69.004 137.902 166.441 1.00 71.02 C
ATOM 14 N1 U B2529 69.945 137.565 165.357 1.00 69.38 N
ATOM 15 C2 U B2529 69.537 136.638 164.409 1.00 67.44 C
ATOM 16 O2 U B2529 68.445 136.101 164.431 1.00 65.41 O
ATOM 17 N3 U B2529 70.462 136.360 163.435 1.00 67.06 N
ATOM 18 C4 U B2529 71.727 136.894 163.310 1.00 67.55 C
ATOM 19 O4 U B2529 72.470 136.490 162.413 1.00 67.91 O
ATOM 20 C5 U B2529 72.073 137.843 164.318 1.00 68.35 C
ATOM 21 C6 U B2529 71.195 138.140 165.283 1.00 69.14 C
ATOM 22 P A B2530 71.157 136.478 170.515 1.00 72.99 P
ATOM 23 OP1 A B2530 71.207 135.178 169.802 1.00 72.42 O
ATOM 24 OP2 A B2530 70.942 136.499 171.978 1.00 73.69 O
ATOM 25 O5' A B2530 72.506 137.259 170.205 1.00 72.72 O
TER
ATOM 2 P C A2543 64.774 131.872 159.151 1.00 68.24 P
ATOM 3 OP1 C A2543 64.038 131.506 157.914 1.00 68.22 O
ATOM 4 OP2 C A2543 65.653 133.070 159.155 1.00 68.69 O
ATOM 5 O5' C A2543 63.705 132.001 160.321 1.00 66.62 O
ATOM 6 C5' C A2543 62.668 131.023 160.473 1.00 66.49 C
ATOM 7 C4' C A2543 61.739 131.420 161.591 1.00 67.27 C
ATOM 8 O4' C A2543 62.443 131.375 162.857 1.00 68.08 O
ATOM 9 C3' C A2543 61.211 132.839 161.518 1.00 67.39 C
ATOM 10 O3' C A2543 60.102 132.915 160.633 1.00 69.24 O
ATOM 11 C2' C A2543 60.824 133.115 162.966 1.00 66.67 C
ATOM 12 O2' C A2543 59.579 132.560 163.334 1.00 66.79 O
ATOM 13 C1' C A2543 61.928 132.375 163.721 1.00 66.81 C
ATOM 14 N1 C A2543 63.032 133.242 164.170 1.00 66.75 N
ATOM 15 C2 C A2543 62.812 134.092 165.257 1.00 66.98 C
ATOM 16 O2 C A2543 61.699 134.089 165.810 1.00 67.45 O
ATOM 17 N3 C A2543 63.812 134.893 165.680 1.00 66.69 N
ATOM 18 C4 C A2543 64.994 134.863 165.066 1.00 66.71 C
ATOM 19 N4 C A2543 65.953 135.667 165.523 1.00 68.04 N
ATOM 20 C5 C A2543 65.247 134.007 163.959 1.00 66.42 C
ATOM 21 C6 C A2543 64.248 133.222 163.547 1.00 66.55 C
ATOM 22 P U A2544 59.872 134.239 159.756 1.00 70.11 P
ATOM 23 OP1 U A2544 58.472 134.212 159.255 1.00 69.09 O
ATOM 24 OP2 U A2544 61.001 134.344 158.796 1.00 69.63 O
ATOM 25 O5' U A2544 59.993 135.421 160.810 1.00 68.11 O
TER
ATOM 1 O3' A B2528 72.218 142.571 167.538 1.00 71.78 O
ATOM 2 P U B2529 72.954 141.273 168.134 1.00 73.34 P
ATOM 3 OP1 U B2529 73.275 141.563 169.554 1.00 74.46 O
ATOM 4 OP2 U B2529 74.055 140.920 167.201 1.00 72.81 O
ATOM 5 O5' U B2529 71.835 140.134 168.064 1.00 72.26 O
ATOM 6 C5' U B2529 70.530 140.347 168.646 1.00 71.01 C
ATOM 7 C4' U B2529 69.591 139.210 168.301 1.00 71.56 C
ATOM 8 O4' U B2529 69.260 139.231 166.887 1.00 71.55 O
ATOM 9 C3' U B2529 70.101 137.796 168.525 1.00 71.80 C
ATOM 10 O3' U B2529 70.011 137.405 169.883 1.00 72.58 O
ATOM 11 C2' U B2529 69.153 136.983 167.655 1.00 71.71 C
ATOM 12 O2' U B2529 67.889 136.801 168.263 1.00 71.45 O
ATOM 13 C1' U B2529 69.004 137.902 166.441 1.00 71.02 C
ATOM 14 N1 U B2529 69.945 137.565 165.357 1.00 69.38 N
ATOM 15 C2 U B2529 69.537 136.638 164.409 1.00 67.44 C
ATOM 16 O2 U B2529 68.445 136.101 164.431 1.00 65.41 O
ATOM 17 N3 U B2529 70.462 136.360 163.435 1.00 67.06 N
ATOM 18 C4 U B2529 71.727 136.894 163.310 1.00 67.55 C
ATOM 19 O4 U B2529 72.470 136.490 162.413 1.00 67.91 O
ATOM 20 C5 U B2529 72.073 137.843 164.318 1.00 68.35 C
ATOM 21 C6 U B2529 71.195 138.140 165.283 1.00 69.14 C
ATOM 22 P A B2530 71.157 136.478 170.515 1.00 72.99 P
ATOM 23 OP1 A B2530 71.207 135.178 169.802 1.00 72.42 O
ATOM 24 OP2 A B2530 70.942 136.499 171.978 1.00 73.69 O
ATOM 25 O5' A B2530 72.506 137.259 170.205 1.00 72.72 O
TER
Atoms:
C2: (62.812,134.092,165.257)
OP1: (64.038,131.506,157.914)
OP2: (65.653,133.070,159.155)
C4: (64.994,134.863,165.066)
O5': (63.705,132.001,160.321)
C3': (61.211,132.839,161.518)
C1': (61.928,132.375,163.721)
O4': (62.443,131.375,162.857)
C5': (62.668,131.023,160.473)
P: (64.774,131.872,159.151)
O2: (61.699,134.089,165.810)
C4': (61.739,131.420,161.591)
C2': (60.824,133.115,162.966)
O2': (59.579,132.560,163.334)
N1: (63.032,133.242,164.170)
N3: (63.812,134.893,165.680)
N4: (65.953,135.667,165.523)
C6: (64.248,133.222,163.547)
C5: (65.247,134.007,163.959)
O3': (60.102,132.915,160.633)
OP1: (64.038,131.506,157.914)
OP2: (65.653,133.070,159.155)
C4: (64.994,134.863,165.066)
O5': (63.705,132.001,160.321)
C3': (61.211,132.839,161.518)
C1': (61.928,132.375,163.721)
O4': (62.443,131.375,162.857)
C5': (62.668,131.023,160.473)
P: (64.774,131.872,159.151)
O2: (61.699,134.089,165.810)
C4': (61.739,131.420,161.591)
C2': (60.824,133.115,162.966)
O2': (59.579,132.560,163.334)
N1: (63.032,133.242,164.170)
N3: (63.812,134.893,165.680)
N4: (65.953,135.667,165.523)
C6: (64.248,133.222,163.547)
C5: (65.247,134.007,163.959)
O3': (60.102,132.915,160.633)
C4: (71.727,136.894,163.310)
N3: (70.462,136.360,163.435)
OP1: (73.275,141.563,169.554)
OP2: (74.055,140.920,167.201)
C2: (69.537,136.638,164.409)
C1': (69.004,137.902,166.441)
C3': (70.101,137.796,168.525)
O5': (71.835,140.134,168.064)
O4': (69.260,139.231,166.887)
C5': (70.530,140.347,168.646)
P: (72.954,141.273,168.134)
C4': (69.591,139.210,168.301)
C2': (69.153,136.983,167.655)
O2': (67.889,136.801,168.263)
N1: (69.945,137.565,165.357)
O4: (72.470,136.490,162.413)
O2: (68.445,136.101,164.431)
C6: (71.195,138.140,165.283)
C5: (72.073,137.843,164.318)
O3': (70.011,137.405,169.883)
N3: (70.462,136.360,163.435)
OP1: (73.275,141.563,169.554)
OP2: (74.055,140.920,167.201)
C2: (69.537,136.638,164.409)
C1': (69.004,137.902,166.441)
C3': (70.101,137.796,168.525)
O5': (71.835,140.134,168.064)
O4': (69.260,139.231,166.887)
C5': (70.530,140.347,168.646)
P: (72.954,141.273,168.134)
C4': (69.591,139.210,168.301)
C2': (69.153,136.983,167.655)
O2': (67.889,136.801,168.263)
N1: (69.945,137.565,165.357)
O4: (72.470,136.490,162.413)
O2: (68.445,136.101,164.431)
C6: (71.195,138.140,165.283)
C5: (72.073,137.843,164.318)
O3': (70.011,137.405,169.883)
Image (generated by PyMOL):