Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0244:0241
Extra
PDB:
ATOM 1 O3' A A 243 83.420 141.834 -9.240 1.00 75.55 O
ATOM 2 P C A 244 84.788 140.997 -9.113 1.00 76.50 P
ATOM 3 OP1 C A 244 85.052 140.366 -10.432 1.00 76.14 O
ATOM 4 OP2 C A 244 84.700 140.143 -7.898 1.00 77.95 O
ATOM 5 O5' C A 244 85.906 142.100 -8.840 1.00 74.90 O
ATOM 6 C5' C A 244 86.360 142.973 -9.884 1.00 72.24 C
ATOM 7 C4' C A 244 87.229 144.064 -9.308 1.00 70.84 C
ATOM 8 O4' C A 244 86.472 144.794 -8.307 1.00 71.21 O
ATOM 9 C3' C A 244 88.474 143.613 -8.560 1.00 70.22 C
ATOM 10 O3' C A 244 89.559 143.356 -9.441 1.00 68.10 O
ATOM 11 C2' C A 244 88.767 144.822 -7.683 1.00 71.36 C
ATOM 12 O2' C A 244 89.400 145.871 -8.387 1.00 71.75 O
ATOM 13 C1' C A 244 87.353 145.264 -7.298 1.00 72.28 C
ATOM 14 N1 C A 244 86.925 144.734 -5.988 1.00 74.30 N
ATOM 15 C2 C A 244 87.370 145.380 -4.820 1.00 75.29 C
ATOM 16 O2 C A 244 88.088 146.389 -4.920 1.00 75.31 O
ATOM 17 N3 C A 244 87.005 144.888 -3.616 1.00 75.94 N
ATOM 18 C4 C A 244 86.228 143.806 -3.543 1.00 76.34 C
ATOM 19 N4 C A 244 85.901 143.354 -2.328 1.00 77.08 N
ATOM 20 C5 C A 244 85.753 143.137 -4.711 1.00 75.72 C
ATOM 21 C6 C A 244 86.121 143.630 -5.900 1.00 74.90 C
ATOM 22 P G A 245 90.394 141.990 -9.307 1.00 68.78 P
ATOM 23 OP1 G A 245 91.594 142.125 -10.171 1.00 69.48 O
ATOM 24 OP2 G A 245 89.462 140.849 -9.511 1.00 68.25 O
ATOM 25 O5' G A 245 90.901 141.961 -7.798 1.00 67.27 O
TER
ATOM 1 O3' C B 240 80.996 139.523 4.118 1.00 53.91 O
ATOM 2 P U B 241 79.729 140.056 3.292 1.00 55.76 P
ATOM 3 OP1 U B 241 78.959 140.940 4.200 1.00 55.06 O
ATOM 4 OP2 U B 241 79.049 138.915 2.628 1.00 55.82 O
ATOM 5 O5' U B 241 80.386 140.946 2.151 1.00 59.55 O
ATOM 6 C5' U B 241 81.171 142.098 2.483 1.00 62.85 C
ATOM 7 C4' U B 241 81.778 142.687 1.239 1.00 65.86 C
ATOM 8 O4' U B 241 82.787 141.785 0.710 1.00 66.94 O
ATOM 9 C3' U B 241 80.833 142.861 0.064 1.00 68.19 C
ATOM 10 O3' U B 241 79.962 143.973 0.183 1.00 69.93 O
ATOM 11 C2' U B 241 81.810 142.984 -1.092 1.00 69.18 C
ATOM 12 O2' U B 241 82.435 144.254 -1.132 1.00 70.18 O
ATOM 13 C1' U B 241 82.840 141.920 -0.705 1.00 68.80 C
ATOM 14 N1 U B 241 82.550 140.616 -1.328 1.00 69.30 N
ATOM 15 C2 U B 241 83.378 140.199 -2.356 1.00 70.19 C
ATOM 16 O2 U B 241 84.336 140.849 -2.742 1.00 71.25 O
ATOM 17 N3 U B 241 83.041 138.992 -2.923 1.00 69.85 N
ATOM 18 C4 U B 241 81.987 138.178 -2.579 1.00 68.34 C
ATOM 19 O4 U B 241 81.784 137.143 -3.220 1.00 67.55 O
ATOM 20 C5 U B 241 81.187 138.668 -1.502 1.00 69.39 C
ATOM 21 C6 U B 241 81.488 139.838 -0.924 1.00 69.25 C
ATOM 22 P C B 242 78.421 143.806 -0.239 1.00 71.55 P
ATOM 23 OP1 C B 242 77.771 145.133 -0.127 1.00 71.57 O
ATOM 24 OP2 C B 242 77.865 142.649 0.514 1.00 71.31 O
ATOM 25 O5' C B 242 78.489 143.392 -1.777 1.00 72.55 O
TER
ATOM 2 P C A 244 84.788 140.997 -9.113 1.00 76.50 P
ATOM 3 OP1 C A 244 85.052 140.366 -10.432 1.00 76.14 O
ATOM 4 OP2 C A 244 84.700 140.143 -7.898 1.00 77.95 O
ATOM 5 O5' C A 244 85.906 142.100 -8.840 1.00 74.90 O
ATOM 6 C5' C A 244 86.360 142.973 -9.884 1.00 72.24 C
ATOM 7 C4' C A 244 87.229 144.064 -9.308 1.00 70.84 C
ATOM 8 O4' C A 244 86.472 144.794 -8.307 1.00 71.21 O
ATOM 9 C3' C A 244 88.474 143.613 -8.560 1.00 70.22 C
ATOM 10 O3' C A 244 89.559 143.356 -9.441 1.00 68.10 O
ATOM 11 C2' C A 244 88.767 144.822 -7.683 1.00 71.36 C
ATOM 12 O2' C A 244 89.400 145.871 -8.387 1.00 71.75 O
ATOM 13 C1' C A 244 87.353 145.264 -7.298 1.00 72.28 C
ATOM 14 N1 C A 244 86.925 144.734 -5.988 1.00 74.30 N
ATOM 15 C2 C A 244 87.370 145.380 -4.820 1.00 75.29 C
ATOM 16 O2 C A 244 88.088 146.389 -4.920 1.00 75.31 O
ATOM 17 N3 C A 244 87.005 144.888 -3.616 1.00 75.94 N
ATOM 18 C4 C A 244 86.228 143.806 -3.543 1.00 76.34 C
ATOM 19 N4 C A 244 85.901 143.354 -2.328 1.00 77.08 N
ATOM 20 C5 C A 244 85.753 143.137 -4.711 1.00 75.72 C
ATOM 21 C6 C A 244 86.121 143.630 -5.900 1.00 74.90 C
ATOM 22 P G A 245 90.394 141.990 -9.307 1.00 68.78 P
ATOM 23 OP1 G A 245 91.594 142.125 -10.171 1.00 69.48 O
ATOM 24 OP2 G A 245 89.462 140.849 -9.511 1.00 68.25 O
ATOM 25 O5' G A 245 90.901 141.961 -7.798 1.00 67.27 O
TER
ATOM 1 O3' C B 240 80.996 139.523 4.118 1.00 53.91 O
ATOM 2 P U B 241 79.729 140.056 3.292 1.00 55.76 P
ATOM 3 OP1 U B 241 78.959 140.940 4.200 1.00 55.06 O
ATOM 4 OP2 U B 241 79.049 138.915 2.628 1.00 55.82 O
ATOM 5 O5' U B 241 80.386 140.946 2.151 1.00 59.55 O
ATOM 6 C5' U B 241 81.171 142.098 2.483 1.00 62.85 C
ATOM 7 C4' U B 241 81.778 142.687 1.239 1.00 65.86 C
ATOM 8 O4' U B 241 82.787 141.785 0.710 1.00 66.94 O
ATOM 9 C3' U B 241 80.833 142.861 0.064 1.00 68.19 C
ATOM 10 O3' U B 241 79.962 143.973 0.183 1.00 69.93 O
ATOM 11 C2' U B 241 81.810 142.984 -1.092 1.00 69.18 C
ATOM 12 O2' U B 241 82.435 144.254 -1.132 1.00 70.18 O
ATOM 13 C1' U B 241 82.840 141.920 -0.705 1.00 68.80 C
ATOM 14 N1 U B 241 82.550 140.616 -1.328 1.00 69.30 N
ATOM 15 C2 U B 241 83.378 140.199 -2.356 1.00 70.19 C
ATOM 16 O2 U B 241 84.336 140.849 -2.742 1.00 71.25 O
ATOM 17 N3 U B 241 83.041 138.992 -2.923 1.00 69.85 N
ATOM 18 C4 U B 241 81.987 138.178 -2.579 1.00 68.34 C
ATOM 19 O4 U B 241 81.784 137.143 -3.220 1.00 67.55 O
ATOM 20 C5 U B 241 81.187 138.668 -1.502 1.00 69.39 C
ATOM 21 C6 U B 241 81.488 139.838 -0.924 1.00 69.25 C
ATOM 22 P C B 242 78.421 143.806 -0.239 1.00 71.55 P
ATOM 23 OP1 C B 242 77.771 145.133 -0.127 1.00 71.57 O
ATOM 24 OP2 C B 242 77.865 142.649 0.514 1.00 71.31 O
ATOM 25 O5' C B 242 78.489 143.392 -1.777 1.00 72.55 O
TER
Atoms:
C2: (87.370,145.380,-4.820)
OP1: (85.052,140.366,-10.432)
OP2: (84.700,140.143,-7.898)
C4: (86.228,143.806,-3.543)
O5': (85.906,142.100,-8.840)
C3': (88.474,143.613,-8.560)
C1': (87.353,145.264,-7.298)
O4': (86.472,144.794,-8.307)
C5': (86.360,142.973,-9.884)
P: (84.788,140.997,-9.113)
O2: (88.088,146.389,-4.920)
C4': (87.229,144.064,-9.308)
C2': (88.767,144.822,-7.683)
O2': (89.400,145.871,-8.387)
N1: (86.925,144.734,-5.988)
N3: (87.005,144.888,-3.616)
N4: (85.901,143.354,-2.328)
C6: (86.121,143.630,-5.900)
C5: (85.753,143.137,-4.711)
O3': (89.559,143.356,-9.441)
OP1: (85.052,140.366,-10.432)
OP2: (84.700,140.143,-7.898)
C4: (86.228,143.806,-3.543)
O5': (85.906,142.100,-8.840)
C3': (88.474,143.613,-8.560)
C1': (87.353,145.264,-7.298)
O4': (86.472,144.794,-8.307)
C5': (86.360,142.973,-9.884)
P: (84.788,140.997,-9.113)
O2: (88.088,146.389,-4.920)
C4': (87.229,144.064,-9.308)
C2': (88.767,144.822,-7.683)
O2': (89.400,145.871,-8.387)
N1: (86.925,144.734,-5.988)
N3: (87.005,144.888,-3.616)
N4: (85.901,143.354,-2.328)
C6: (86.121,143.630,-5.900)
C5: (85.753,143.137,-4.711)
O3': (89.559,143.356,-9.441)
C4: (81.987,138.178,-2.579)
N3: (83.041,138.992,-2.923)
OP1: (78.959,140.940,4.200)
OP2: (79.049,138.915,2.628)
C2: (83.378,140.199,-2.356)
C1': (82.840,141.920,-0.705)
C3': (80.833,142.861,0.064)
O5': (80.386,140.946,2.151)
O4': (82.787,141.785,0.710)
C5': (81.171,142.098,2.483)
P: (79.729,140.056,3.292)
C4': (81.778,142.687,1.239)
C2': (81.810,142.984,-1.092)
O2': (82.435,144.254,-1.132)
N1: (82.550,140.616,-1.328)
O4: (81.784,137.143,-3.220)
O2: (84.336,140.849,-2.742)
C6: (81.488,139.838,-0.924)
C5: (81.187,138.668,-1.502)
O3': (79.962,143.973,0.183)
N3: (83.041,138.992,-2.923)
OP1: (78.959,140.940,4.200)
OP2: (79.049,138.915,2.628)
C2: (83.378,140.199,-2.356)
C1': (82.840,141.920,-0.705)
C3': (80.833,142.861,0.064)
O5': (80.386,140.946,2.151)
O4': (82.787,141.785,0.710)
C5': (81.171,142.098,2.483)
P: (79.729,140.056,3.292)
C4': (81.778,142.687,1.239)
C2': (81.810,142.984,-1.092)
O2': (82.435,144.254,-1.132)
N1: (82.550,140.616,-1.328)
O4: (81.784,137.143,-3.220)
O2: (84.336,140.849,-2.742)
C6: (81.488,139.838,-0.924)
C5: (81.187,138.668,-1.502)
O3': (79.962,143.973,0.183)
Image (generated by PyMOL):