Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:0244:0241
Extra
PDB:
ATOM 1 O3' A A 243 83.280 141.524 -9.367 1.00 85.04 O
ATOM 2 P C A 244 84.698 140.766 -9.309 1.00 85.63 P
ATOM 3 OP1 C A 244 84.941 140.191 -10.657 1.00 85.65 O
ATOM 4 OP2 C A 244 84.735 139.877 -8.114 1.00 86.30 O
ATOM 5 O5' C A 244 85.762 141.927 -9.067 1.00 84.51 O
ATOM 6 C5' C A 244 86.253 142.727 -10.153 1.00 82.48 C
ATOM 7 C4' C A 244 87.159 143.806 -9.622 1.00 81.48 C
ATOM 8 O4' C A 244 86.425 144.590 -8.643 1.00 81.49 O
ATOM 9 C3' C A 244 88.380 143.316 -8.860 1.00 80.68 C
ATOM 10 O3' C A 244 89.447 143.026 -9.755 1.00 79.42 O
ATOM 11 C2' C A 244 88.706 144.518 -7.982 1.00 81.12 C
ATOM 12 O2' C A 244 89.362 145.544 -8.698 1.00 80.97 O
ATOM 13 C1' C A 244 87.307 145.019 -7.620 1.00 81.63 C
ATOM 14 N1 C A 244 86.810 144.525 -6.324 1.00 82.27 N
ATOM 15 C2 C A 244 87.328 145.085 -5.148 1.00 82.64 C
ATOM 16 O2 C A 244 88.210 145.954 -5.233 1.00 82.53 O
ATOM 17 N3 C A 244 86.859 144.662 -3.950 1.00 82.93 N
ATOM 18 C4 C A 244 85.921 143.716 -3.899 1.00 83.07 C
ATOM 19 N4 C A 244 85.480 143.340 -2.695 1.00 83.14 N
ATOM 20 C5 C A 244 85.389 143.116 -5.079 1.00 83.26 C
ATOM 21 C6 C A 244 85.856 143.548 -6.258 1.00 82.82 C
ATOM 22 P G A 245 90.365 141.724 -9.527 1.00 78.73 P
ATOM 23 OP1 G A 245 91.623 141.969 -10.275 1.00 79.11 O
ATOM 24 OP2 G A 245 89.565 140.504 -9.815 1.00 78.74 O
ATOM 25 O5' G A 245 90.736 141.742 -7.978 1.00 77.42 O
TER
ATOM 1 O3' C B 240 80.776 139.063 3.951 1.00 67.66 O
ATOM 2 P U B 241 79.620 139.670 3.020 1.00 69.90 P
ATOM 3 OP1 U B 241 78.793 140.578 3.851 1.00 70.04 O
ATOM 4 OP2 U B 241 78.968 138.570 2.268 1.00 69.78 O
ATOM 5 O5' U B 241 80.423 140.554 1.973 1.00 71.78 O
ATOM 6 C5' U B 241 81.008 141.804 2.360 1.00 74.58 C
ATOM 7 C4' U B 241 81.628 142.470 1.162 1.00 76.59 C
ATOM 8 O4' U B 241 82.743 141.667 0.692 1.00 77.25 O
ATOM 9 C3' U B 241 80.726 142.579 -0.055 1.00 78.04 C
ATOM 10 O3' U B 241 79.816 143.673 0.037 1.00 79.71 O
ATOM 11 C2' U B 241 81.740 142.734 -1.179 1.00 78.15 C
ATOM 12 O2' U B 241 82.273 144.039 -1.248 1.00 78.45 O
ATOM 13 C1' U B 241 82.838 141.770 -0.720 1.00 77.99 C
ATOM 14 N1 U B 241 82.669 140.430 -1.298 1.00 78.28 N
ATOM 15 C2 U B 241 83.333 140.152 -2.478 1.00 78.25 C
ATOM 16 O2 U B 241 84.084 140.945 -3.019 1.00 78.22 O
ATOM 17 N3 U B 241 83.085 138.907 -3.001 1.00 78.22 N
ATOM 18 C4 U B 241 82.265 137.932 -2.475 1.00 78.02 C
ATOM 19 O4 U B 241 82.038 136.916 -3.134 1.00 78.31 O
ATOM 20 C5 U B 241 81.646 138.283 -1.235 1.00 78.13 C
ATOM 21 C6 U B 241 81.864 139.488 -0.702 1.00 78.15 C
ATOM 22 P C B 242 78.276 143.461 -0.378 1.00 81.19 P
ATOM 23 OP1 C B 242 77.607 144.787 -0.403 1.00 81.80 O
ATOM 24 OP2 C B 242 77.725 142.379 0.480 1.00 81.62 O
ATOM 25 O5' C B 242 78.357 142.919 -1.876 1.00 82.04 O
TER
ATOM 2 P C A 244 84.698 140.766 -9.309 1.00 85.63 P
ATOM 3 OP1 C A 244 84.941 140.191 -10.657 1.00 85.65 O
ATOM 4 OP2 C A 244 84.735 139.877 -8.114 1.00 86.30 O
ATOM 5 O5' C A 244 85.762 141.927 -9.067 1.00 84.51 O
ATOM 6 C5' C A 244 86.253 142.727 -10.153 1.00 82.48 C
ATOM 7 C4' C A 244 87.159 143.806 -9.622 1.00 81.48 C
ATOM 8 O4' C A 244 86.425 144.590 -8.643 1.00 81.49 O
ATOM 9 C3' C A 244 88.380 143.316 -8.860 1.00 80.68 C
ATOM 10 O3' C A 244 89.447 143.026 -9.755 1.00 79.42 O
ATOM 11 C2' C A 244 88.706 144.518 -7.982 1.00 81.12 C
ATOM 12 O2' C A 244 89.362 145.544 -8.698 1.00 80.97 O
ATOM 13 C1' C A 244 87.307 145.019 -7.620 1.00 81.63 C
ATOM 14 N1 C A 244 86.810 144.525 -6.324 1.00 82.27 N
ATOM 15 C2 C A 244 87.328 145.085 -5.148 1.00 82.64 C
ATOM 16 O2 C A 244 88.210 145.954 -5.233 1.00 82.53 O
ATOM 17 N3 C A 244 86.859 144.662 -3.950 1.00 82.93 N
ATOM 18 C4 C A 244 85.921 143.716 -3.899 1.00 83.07 C
ATOM 19 N4 C A 244 85.480 143.340 -2.695 1.00 83.14 N
ATOM 20 C5 C A 244 85.389 143.116 -5.079 1.00 83.26 C
ATOM 21 C6 C A 244 85.856 143.548 -6.258 1.00 82.82 C
ATOM 22 P G A 245 90.365 141.724 -9.527 1.00 78.73 P
ATOM 23 OP1 G A 245 91.623 141.969 -10.275 1.00 79.11 O
ATOM 24 OP2 G A 245 89.565 140.504 -9.815 1.00 78.74 O
ATOM 25 O5' G A 245 90.736 141.742 -7.978 1.00 77.42 O
TER
ATOM 1 O3' C B 240 80.776 139.063 3.951 1.00 67.66 O
ATOM 2 P U B 241 79.620 139.670 3.020 1.00 69.90 P
ATOM 3 OP1 U B 241 78.793 140.578 3.851 1.00 70.04 O
ATOM 4 OP2 U B 241 78.968 138.570 2.268 1.00 69.78 O
ATOM 5 O5' U B 241 80.423 140.554 1.973 1.00 71.78 O
ATOM 6 C5' U B 241 81.008 141.804 2.360 1.00 74.58 C
ATOM 7 C4' U B 241 81.628 142.470 1.162 1.00 76.59 C
ATOM 8 O4' U B 241 82.743 141.667 0.692 1.00 77.25 O
ATOM 9 C3' U B 241 80.726 142.579 -0.055 1.00 78.04 C
ATOM 10 O3' U B 241 79.816 143.673 0.037 1.00 79.71 O
ATOM 11 C2' U B 241 81.740 142.734 -1.179 1.00 78.15 C
ATOM 12 O2' U B 241 82.273 144.039 -1.248 1.00 78.45 O
ATOM 13 C1' U B 241 82.838 141.770 -0.720 1.00 77.99 C
ATOM 14 N1 U B 241 82.669 140.430 -1.298 1.00 78.28 N
ATOM 15 C2 U B 241 83.333 140.152 -2.478 1.00 78.25 C
ATOM 16 O2 U B 241 84.084 140.945 -3.019 1.00 78.22 O
ATOM 17 N3 U B 241 83.085 138.907 -3.001 1.00 78.22 N
ATOM 18 C4 U B 241 82.265 137.932 -2.475 1.00 78.02 C
ATOM 19 O4 U B 241 82.038 136.916 -3.134 1.00 78.31 O
ATOM 20 C5 U B 241 81.646 138.283 -1.235 1.00 78.13 C
ATOM 21 C6 U B 241 81.864 139.488 -0.702 1.00 78.15 C
ATOM 22 P C B 242 78.276 143.461 -0.378 1.00 81.19 P
ATOM 23 OP1 C B 242 77.607 144.787 -0.403 1.00 81.80 O
ATOM 24 OP2 C B 242 77.725 142.379 0.480 1.00 81.62 O
ATOM 25 O5' C B 242 78.357 142.919 -1.876 1.00 82.04 O
TER
Atoms:
C2: (87.328,145.085,-5.148)
OP1: (84.941,140.191,-10.657)
OP2: (84.735,139.877,-8.114)
C4: (85.921,143.716,-3.899)
O5': (85.762,141.927,-9.067)
C3': (88.380,143.316,-8.860)
C1': (87.307,145.019,-7.620)
O4': (86.425,144.590,-8.643)
C5': (86.253,142.727,-10.153)
P: (84.698,140.766,-9.309)
O2: (88.210,145.954,-5.233)
C4': (87.159,143.806,-9.622)
C2': (88.706,144.518,-7.982)
O2': (89.362,145.544,-8.698)
N1: (86.810,144.525,-6.324)
N3: (86.859,144.662,-3.950)
N4: (85.480,143.340,-2.695)
C6: (85.856,143.548,-6.258)
C5: (85.389,143.116,-5.079)
O3': (89.447,143.026,-9.755)
OP1: (84.941,140.191,-10.657)
OP2: (84.735,139.877,-8.114)
C4: (85.921,143.716,-3.899)
O5': (85.762,141.927,-9.067)
C3': (88.380,143.316,-8.860)
C1': (87.307,145.019,-7.620)
O4': (86.425,144.590,-8.643)
C5': (86.253,142.727,-10.153)
P: (84.698,140.766,-9.309)
O2: (88.210,145.954,-5.233)
C4': (87.159,143.806,-9.622)
C2': (88.706,144.518,-7.982)
O2': (89.362,145.544,-8.698)
N1: (86.810,144.525,-6.324)
N3: (86.859,144.662,-3.950)
N4: (85.480,143.340,-2.695)
C6: (85.856,143.548,-6.258)
C5: (85.389,143.116,-5.079)
O3': (89.447,143.026,-9.755)
C4: (82.265,137.932,-2.475)
N3: (83.085,138.907,-3.001)
OP1: (78.793,140.578,3.851)
OP2: (78.968,138.570,2.268)
C2: (83.333,140.152,-2.478)
C1': (82.838,141.770,-0.720)
C3': (80.726,142.579,-0.055)
O5': (80.423,140.554,1.973)
O4': (82.743,141.667,0.692)
C5': (81.008,141.804,2.360)
P: (79.620,139.670,3.020)
C4': (81.628,142.470,1.162)
C2': (81.740,142.734,-1.179)
O2': (82.273,144.039,-1.248)
N1: (82.669,140.430,-1.298)
O4: (82.038,136.916,-3.134)
O2: (84.084,140.945,-3.019)
C6: (81.864,139.488,-0.702)
C5: (81.646,138.283,-1.235)
O3': (79.816,143.673,0.037)
N3: (83.085,138.907,-3.001)
OP1: (78.793,140.578,3.851)
OP2: (78.968,138.570,2.268)
C2: (83.333,140.152,-2.478)
C1': (82.838,141.770,-0.720)
C3': (80.726,142.579,-0.055)
O5': (80.423,140.554,1.973)
O4': (82.743,141.667,0.692)
C5': (81.008,141.804,2.360)
P: (79.620,139.670,3.020)
C4': (81.628,142.470,1.162)
C2': (81.740,142.734,-1.179)
O2': (82.273,144.039,-1.248)
N1: (82.669,140.430,-1.298)
O4: (82.038,136.916,-3.134)
O2: (84.084,140.945,-3.019)
C6: (81.864,139.488,-0.702)
C5: (81.646,138.283,-1.235)
O3': (79.816,143.673,0.037)
Image (generated by PyMOL):