ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A838:A835

Extra

PDB:
ATOM 1 O3' A A 837 169.923 123.406 -19.215 1.00 32.85 O
ATOM 2 P C A 838 169.764 124.413 -20.462 1.00 33.28 P
ATOM 3 OP1 C A 838 170.566 125.635 -20.104 1.00 32.66 O
ATOM 4 OP2 C A 838 168.330 124.539 -20.815 1.00 32.67 O
ATOM 5 O5' C A 838 170.502 123.668 -21.666 1.00 33.49 O
ATOM 6 C5' C A 838 171.832 123.120 -21.505 1.00 32.07 C
ATOM 7 C4' C A 838 172.121 122.118 -22.595 1.00 31.26 C
ATOM 8 O4' C A 838 171.366 120.894 -22.380 1.00 32.48 O
ATOM 9 C3' C A 838 171.731 122.580 -23.989 1.00 30.49 C
ATOM 10 O3' C A 838 172.744 123.353 -24.571 1.00 29.74 O
ATOM 11 C2' C A 838 171.534 121.274 -24.738 1.00 31.41 C
ATOM 12 O2' C A 838 172.770 120.784 -25.218 1.00 31.75 O
ATOM 13 C1' C A 838 170.981 120.356 -23.638 1.00 32.62 C
ATOM 14 N1 C A 838 169.508 120.208 -23.684 1.00 32.65 N
ATOM 15 C2 C A 838 168.959 119.101 -24.363 1.00 33.44 C
ATOM 16 O2 C A 838 169.715 118.256 -24.854 1.00 36.24 O
ATOM 17 N3 C A 838 167.616 118.981 -24.462 1.00 32.92 N
ATOM 18 C4 C A 838 166.824 119.901 -23.914 1.00 31.30 C
ATOM 19 N4 C A 838 165.516 119.758 -24.076 1.00 27.91 N
ATOM 20 C5 C A 838 167.348 121.015 -23.188 1.00 30.71 C
ATOM 21 C6 C A 838 168.683 121.128 -23.098 1.00 31.80 C
ATOM 22 P G A 839 172.371 124.406 -25.724 1.00 30.61 P
ATOM 23 OP1 G A 839 173.651 125.020 -26.192 1.00 30.39 O
ATOM 24 OP2 G A 839 171.268 125.266 -25.223 1.00 30.45 O
ATOM 25 O5' G A 839 171.827 123.497 -26.878 1.00 29.71 O
TER

ATOM 1 O3' C B 834 156.417 120.777 -20.953 1.00 33.94 O
ATOM 2 P U B 835 157.143 120.438 -19.574 1.00 34.99 P
ATOM 3 OP1 U B 835 156.558 119.177 -19.037 1.00 33.01 O
ATOM 4 OP2 U B 835 157.132 121.665 -18.753 1.00 35.65 O
ATOM 5 O5' U B 835 158.641 120.140 -20.020 1.00 35.97 O
ATOM 6 C5' U B 835 158.945 119.039 -20.889 1.00 33.66 C
ATOM 7 C4' U B 835 160.431 118.929 -21.108 1.00 32.83 C
ATOM 8 O4' U B 835 160.909 119.980 -21.982 1.00 33.78 O
ATOM 9 C3' U B 835 161.294 119.040 -19.871 1.00 32.24 C
ATOM 10 O3' U B 835 161.347 117.820 -19.200 1.00 29.95 O
ATOM 11 C2' U B 835 162.649 119.444 -20.442 1.00 33.68 C
ATOM 12 O2' U B 835 163.396 118.344 -20.910 1.00 35.47 O
ATOM 13 C1' U B 835 162.248 120.302 -21.641 1.00 35.55 C
ATOM 14 N1 U B 835 162.337 121.742 -21.363 1.00 40.19 N
ATOM 15 C2 U B 835 163.346 122.476 -21.982 1.00 42.39 C
ATOM 16 O2 U B 835 164.129 122.001 -22.781 1.00 43.43 O
ATOM 17 N3 U B 835 163.384 123.801 -21.641 1.00 45.31 N
ATOM 18 C4 U B 835 162.514 124.465 -20.794 1.00 45.83 C
ATOM 19 O4 U B 835 162.603 125.687 -20.670 1.00 48.18 O
ATOM 20 C5 U B 835 161.500 123.644 -20.218 1.00 44.20 C
ATOM 21 C6 U B 835 161.449 122.348 -20.510 1.00 41.53 C
ATOM 22 P A B 836 161.322 117.802 -17.602 1.00 30.33 P
ATOM 23 OP1 A B 836 161.358 116.384 -17.164 1.00 30.42 O
ATOM 24 OP2 A B 836 160.234 118.691 -17.155 1.00 33.34 O
ATOM 25 O5' A B 836 162.668 118.447 -17.182 1.00 29.37 O
TER

Atoms:
C2: (168.959,119.101,-24.363)
OP1: (170.566,125.635,-20.104)
OP2: (168.330,124.539,-20.815)
C4: (166.824,119.901,-23.914)
O5': (170.502,123.668,-21.666)
C3': (171.731,122.580,-23.989)
C1': (170.981,120.356,-23.638)
O4': (171.366,120.894,-22.380)
C5': (171.832,123.120,-21.505)
P: (169.764,124.413,-20.462)
O2: (169.715,118.256,-24.854)
C4': (172.121,122.118,-22.595)
C2': (171.534,121.274,-24.738)
O2': (172.770,120.784,-25.218)
N1: (169.508,120.208,-23.684)
N3: (167.616,118.981,-24.462)
N4: (165.516,119.758,-24.076)
C6: (168.683,121.128,-23.098)
C5: (167.348,121.015,-23.188)
O3': (172.744,123.353,-24.571)
C4: (162.514,124.465,-20.794)
N3: (163.384,123.801,-21.641)
OP1: (156.558,119.177,-19.037)
OP2: (157.132,121.665,-18.753)
C2: (163.346,122.476,-21.982)
C1': (162.248,120.302,-21.641)
C3': (161.294,119.040,-19.871)
O5': (158.641,120.140,-20.020)
O4': (160.909,119.980,-21.982)
C5': (158.945,119.039,-20.889)
P: (157.143,120.438,-19.574)
C4': (160.431,118.929,-21.108)
C2': (162.649,119.444,-20.442)
O2': (163.396,118.344,-20.910)
N1: (162.337,121.742,-21.363)
O4: (162.603,125.687,-20.670)
O2: (164.129,122.001,-22.781)
C6: (161.449,122.348,-20.510)
C5: (161.500,123.644,-20.218)
O3': (161.347,117.820,-19.200)
Image (generated by PyMOL):
PyMOL image
show in jmol