Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0942:0971
Extra
PDB:
ATOM 1 O3' U A 941 55.676 71.037 108.514 1.00 33.13 O
ATOM 2 P A A 942 55.843 70.749 110.091 1.00 34.03 P
ATOM 3 OP1 A A 942 56.671 71.853 110.662 1.00 32.16 O
ATOM 4 OP2 A A 942 56.273 69.343 110.273 1.00 32.84 O
ATOM 5 O5' A A 942 54.375 70.915 110.678 1.00 32.52 O
ATOM 6 C5' A A 942 53.731 72.198 110.703 1.00 33.01 C
ATOM 7 C4' A A 942 52.400 72.092 111.398 1.00 36.03 C
ATOM 8 O4' A A 942 51.518 71.212 110.646 1.00 38.67 O
ATOM 9 C3' A A 942 52.449 71.450 112.769 1.00 37.15 C
ATOM 10 O3' A A 942 52.884 72.368 113.754 1.00 39.49 O
ATOM 11 C2' A A 942 51.010 70.989 112.954 1.00 37.50 C
ATOM 12 O2' A A 942 50.129 72.045 113.280 1.00 37.49 O
ATOM 13 C1' A A 942 50.683 70.491 111.545 1.00 37.49 C
ATOM 14 N9 A A 942 50.932 69.058 111.365 1.00 36.68 N
ATOM 15 C8 A A 942 51.971 68.454 110.700 1.00 36.00 C
ATOM 16 N7 A A 942 51.912 67.147 110.708 1.00 37.25 N
ATOM 17 C5 A A 942 50.760 66.867 111.431 1.00 36.97 C
ATOM 18 C6 A A 942 50.137 65.654 111.800 1.00 38.35 C
ATOM 19 N6 A A 942 50.614 64.441 111.495 1.00 37.27 N
ATOM 20 N1 A A 942 48.993 65.731 112.511 1.00 37.17 N
ATOM 21 C2 A A 942 48.523 66.938 112.837 1.00 36.81 C
ATOM 22 N3 A A 942 49.016 68.141 112.558 1.00 36.65 N
ATOM 23 C4 A A 942 50.148 68.035 111.841 1.00 36.46 C
ATOM 24 P G A 943 53.946 71.897 114.856 1.00 39.66 P
ATOM 25 OP1 G A 943 54.159 73.037 115.777 1.00 40.59 O
ATOM 26 OP2 G A 943 55.102 71.297 114.160 1.00 38.84 O
ATOM 27 O5' G A 943 53.182 70.730 115.629 1.00 40.90 O
TER
ATOM 1 O3' C B 970 51.837 55.633 111.779 1.00 40.28 O
ATOM 2 P A B 971 50.967 55.831 110.453 1.00 40.29 P
ATOM 3 OP1 A B 971 49.790 54.925 110.533 1.00 38.19 O
ATOM 4 OP2 A B 971 51.902 55.725 109.298 1.00 39.26 O
ATOM 5 O5' A B 971 50.463 57.338 110.575 1.00 39.11 O
ATOM 6 C5' A B 971 49.525 57.724 111.596 1.00 39.41 C
ATOM 7 C4' A B 971 49.387 59.229 111.638 1.00 41.35 C
ATOM 8 O4' A B 971 50.603 59.839 112.156 1.00 42.33 O
ATOM 9 C3' A B 971 49.196 59.898 110.291 1.00 40.14 C
ATOM 10 O3' A B 971 47.871 59.801 109.805 1.00 40.43 O
ATOM 11 C2' A B 971 49.642 61.319 110.587 1.00 41.22 C
ATOM 12 O2' A B 971 48.684 62.056 111.316 1.00 39.97 O
ATOM 13 C1' A B 971 50.867 61.051 111.463 1.00 41.43 C
ATOM 14 N9 A B 971 52.037 60.834 110.614 1.00 42.15 N
ATOM 15 C8 A B 971 52.502 59.633 110.137 1.00 44.19 C
ATOM 16 N7 A B 971 53.533 59.743 109.340 1.00 43.83 N
ATOM 17 C5 A B 971 53.773 61.106 109.296 1.00 44.72 C
ATOM 18 C6 A B 971 54.732 61.866 108.616 1.00 46.11 C
ATOM 19 N6 A B 971 55.648 61.330 107.809 1.00 47.52 N
ATOM 20 N1 A B 971 54.716 63.207 108.792 1.00 45.74 N
ATOM 21 C2 A B 971 53.785 63.733 109.600 1.00 45.39 C
ATOM 22 N3 A B 971 52.823 63.121 110.289 1.00 44.76 N
ATOM 23 C4 A B 971 52.872 61.791 110.091 1.00 43.86 C
ATOM 24 P A B 972 47.612 59.872 108.225 1.00 39.03 P
ATOM 25 OP1 A B 972 46.228 59.414 107.958 1.00 39.43 O
ATOM 26 OP2 A B 972 48.751 59.209 107.540 1.00 39.21 O
ATOM 27 O5' A B 972 47.694 61.432 107.931 1.00 39.78 O
TER
ATOM 2 P A A 942 55.843 70.749 110.091 1.00 34.03 P
ATOM 3 OP1 A A 942 56.671 71.853 110.662 1.00 32.16 O
ATOM 4 OP2 A A 942 56.273 69.343 110.273 1.00 32.84 O
ATOM 5 O5' A A 942 54.375 70.915 110.678 1.00 32.52 O
ATOM 6 C5' A A 942 53.731 72.198 110.703 1.00 33.01 C
ATOM 7 C4' A A 942 52.400 72.092 111.398 1.00 36.03 C
ATOM 8 O4' A A 942 51.518 71.212 110.646 1.00 38.67 O
ATOM 9 C3' A A 942 52.449 71.450 112.769 1.00 37.15 C
ATOM 10 O3' A A 942 52.884 72.368 113.754 1.00 39.49 O
ATOM 11 C2' A A 942 51.010 70.989 112.954 1.00 37.50 C
ATOM 12 O2' A A 942 50.129 72.045 113.280 1.00 37.49 O
ATOM 13 C1' A A 942 50.683 70.491 111.545 1.00 37.49 C
ATOM 14 N9 A A 942 50.932 69.058 111.365 1.00 36.68 N
ATOM 15 C8 A A 942 51.971 68.454 110.700 1.00 36.00 C
ATOM 16 N7 A A 942 51.912 67.147 110.708 1.00 37.25 N
ATOM 17 C5 A A 942 50.760 66.867 111.431 1.00 36.97 C
ATOM 18 C6 A A 942 50.137 65.654 111.800 1.00 38.35 C
ATOM 19 N6 A A 942 50.614 64.441 111.495 1.00 37.27 N
ATOM 20 N1 A A 942 48.993 65.731 112.511 1.00 37.17 N
ATOM 21 C2 A A 942 48.523 66.938 112.837 1.00 36.81 C
ATOM 22 N3 A A 942 49.016 68.141 112.558 1.00 36.65 N
ATOM 23 C4 A A 942 50.148 68.035 111.841 1.00 36.46 C
ATOM 24 P G A 943 53.946 71.897 114.856 1.00 39.66 P
ATOM 25 OP1 G A 943 54.159 73.037 115.777 1.00 40.59 O
ATOM 26 OP2 G A 943 55.102 71.297 114.160 1.00 38.84 O
ATOM 27 O5' G A 943 53.182 70.730 115.629 1.00 40.90 O
TER
ATOM 1 O3' C B 970 51.837 55.633 111.779 1.00 40.28 O
ATOM 2 P A B 971 50.967 55.831 110.453 1.00 40.29 P
ATOM 3 OP1 A B 971 49.790 54.925 110.533 1.00 38.19 O
ATOM 4 OP2 A B 971 51.902 55.725 109.298 1.00 39.26 O
ATOM 5 O5' A B 971 50.463 57.338 110.575 1.00 39.11 O
ATOM 6 C5' A B 971 49.525 57.724 111.596 1.00 39.41 C
ATOM 7 C4' A B 971 49.387 59.229 111.638 1.00 41.35 C
ATOM 8 O4' A B 971 50.603 59.839 112.156 1.00 42.33 O
ATOM 9 C3' A B 971 49.196 59.898 110.291 1.00 40.14 C
ATOM 10 O3' A B 971 47.871 59.801 109.805 1.00 40.43 O
ATOM 11 C2' A B 971 49.642 61.319 110.587 1.00 41.22 C
ATOM 12 O2' A B 971 48.684 62.056 111.316 1.00 39.97 O
ATOM 13 C1' A B 971 50.867 61.051 111.463 1.00 41.43 C
ATOM 14 N9 A B 971 52.037 60.834 110.614 1.00 42.15 N
ATOM 15 C8 A B 971 52.502 59.633 110.137 1.00 44.19 C
ATOM 16 N7 A B 971 53.533 59.743 109.340 1.00 43.83 N
ATOM 17 C5 A B 971 53.773 61.106 109.296 1.00 44.72 C
ATOM 18 C6 A B 971 54.732 61.866 108.616 1.00 46.11 C
ATOM 19 N6 A B 971 55.648 61.330 107.809 1.00 47.52 N
ATOM 20 N1 A B 971 54.716 63.207 108.792 1.00 45.74 N
ATOM 21 C2 A B 971 53.785 63.733 109.600 1.00 45.39 C
ATOM 22 N3 A B 971 52.823 63.121 110.289 1.00 44.76 N
ATOM 23 C4 A B 971 52.872 61.791 110.091 1.00 43.86 C
ATOM 24 P A B 972 47.612 59.872 108.225 1.00 39.03 P
ATOM 25 OP1 A B 972 46.228 59.414 107.958 1.00 39.43 O
ATOM 26 OP2 A B 972 48.751 59.209 107.540 1.00 39.21 O
ATOM 27 O5' A B 972 47.694 61.432 107.931 1.00 39.78 O
TER
Atoms:
OP1: (56.671,71.853,110.662)
OP2: (56.273,69.343,110.273)
C3': (52.449,71.450,112.769)
C1': (50.683,70.491,111.545)
C5': (53.731,72.198,110.703)
O4': (51.518,71.212,110.646)
C8: (51.971,68.454,110.700)
O2': (50.129,72.045,113.280)
C6: (50.137,65.654,111.800)
C5: (50.760,66.867,111.431)
C4: (50.148,68.035,111.841)
P: (55.843,70.749,110.091)
C4': (52.400,72.092,111.398)
C2': (51.010,70.989,112.954)
C2: (48.523,66.938,112.837)
N1: (48.993,65.731,112.511)
N3: (49.016,68.141,112.558)
N6: (50.614,64.441,111.495)
N7: (51.912,67.147,110.708)
N9: (50.932,69.058,111.365)
O5': (54.375,70.915,110.678)
O3': (52.884,72.368,113.754)
OP2: (56.273,69.343,110.273)
C3': (52.449,71.450,112.769)
C1': (50.683,70.491,111.545)
C5': (53.731,72.198,110.703)
O4': (51.518,71.212,110.646)
C8: (51.971,68.454,110.700)
O2': (50.129,72.045,113.280)
C6: (50.137,65.654,111.800)
C5: (50.760,66.867,111.431)
C4: (50.148,68.035,111.841)
P: (55.843,70.749,110.091)
C4': (52.400,72.092,111.398)
C2': (51.010,70.989,112.954)
C2: (48.523,66.938,112.837)
N1: (48.993,65.731,112.511)
N3: (49.016,68.141,112.558)
N6: (50.614,64.441,111.495)
N7: (51.912,67.147,110.708)
N9: (50.932,69.058,111.365)
O5': (54.375,70.915,110.678)
O3': (52.884,72.368,113.754)
OP1: (49.790,54.925,110.533)
OP2: (51.902,55.725,109.298)
C3': (49.196,59.898,110.291)
C1': (50.867,61.051,111.463)
C5': (49.525,57.724,111.596)
O4': (50.603,59.839,112.156)
C8: (52.502,59.633,110.137)
O2': (48.684,62.056,111.316)
C6: (54.732,61.866,108.616)
C5: (53.773,61.106,109.296)
C4: (52.872,61.791,110.091)
P: (50.967,55.831,110.453)
C4': (49.387,59.229,111.638)
C2': (49.642,61.319,110.587)
C2: (53.785,63.733,109.600)
N1: (54.716,63.207,108.792)
N3: (52.823,63.121,110.289)
N6: (55.648,61.330,107.809)
N7: (53.533,59.743,109.340)
N9: (52.037,60.834,110.614)
O5': (50.463,57.338,110.575)
O3': (47.871,59.801,109.805)
OP2: (51.902,55.725,109.298)
C3': (49.196,59.898,110.291)
C1': (50.867,61.051,111.463)
C5': (49.525,57.724,111.596)
O4': (50.603,59.839,112.156)
C8: (52.502,59.633,110.137)
O2': (48.684,62.056,111.316)
C6: (54.732,61.866,108.616)
C5: (53.773,61.106,109.296)
C4: (52.872,61.791,110.091)
P: (50.967,55.831,110.453)
C4': (49.387,59.229,111.638)
C2': (49.642,61.319,110.587)
C2: (53.785,63.733,109.600)
N1: (54.716,63.207,108.792)
N3: (52.823,63.121,110.289)
N6: (55.648,61.330,107.809)
N7: (53.533,59.743,109.340)
N9: (52.037,60.834,110.614)
O5': (50.463,57.338,110.575)
O3': (47.871,59.801,109.805)
Image (generated by PyMOL):