ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01300:01272

Extra

PDB:
ATOM 1 O3' G A1299 18.038 141.324 54.929 1.00 40.42 O
ATOM 2 P A A1300 18.812 141.698 53.578 1.00 41.44 P
ATOM 3 OP1 A A1300 20.055 142.456 53.894 1.00 42.06 O
ATOM 4 OP2 A A1300 17.824 142.276 52.643 1.00 42.08 O
ATOM 5 O5' A A1300 19.230 140.271 53.030 1.00 39.92 O
ATOM 6 C5' A A1300 20.169 139.473 53.753 1.00 39.69 C
ATOM 7 C4' A A1300 19.861 138.013 53.574 1.00 39.22 C
ATOM 8 O4' A A1300 18.666 137.663 54.324 1.00 39.54 O
ATOM 9 C3' A A1300 19.612 137.564 52.144 1.00 38.28 C
ATOM 10 O3' A A1300 20.094 136.242 52.010 1.00 40.07 O
ATOM 11 C2' A A1300 18.090 137.546 52.065 1.00 37.98 C
ATOM 12 O2' A A1300 17.627 136.638 51.088 1.00 40.59 O
ATOM 13 C1' A A1300 17.734 137.050 53.463 1.00 37.65 C
ATOM 14 N9 A A1300 16.387 137.365 53.942 1.00 36.86 N
ATOM 15 C8 A A1300 15.937 138.537 54.501 1.00 36.71 C
ATOM 16 N7 A A1300 14.687 138.490 54.895 1.00 34.54 N
ATOM 17 C5 A A1300 14.280 137.207 54.559 1.00 34.06 C
ATOM 18 C6 A A1300 13.061 136.531 54.724 1.00 33.01 C
ATOM 19 N6 A A1300 11.983 137.076 55.294 1.00 32.79 N
ATOM 20 N1 A A1300 12.985 135.258 54.281 1.00 32.05 N
ATOM 21 C2 A A1300 14.066 134.711 53.710 1.00 33.73 C
ATOM 22 N3 A A1300 15.267 135.241 53.501 1.00 34.65 N
ATOM 23 C4 A A1300 15.311 136.507 53.956 1.00 35.53 C
ATOM 24 P C A1301 21.084 135.878 50.811 1.00 38.54 P
ATOM 25 OP1 C A1301 22.443 136.092 51.312 1.00 41.80 O
ATOM 26 OP2 C A1301 20.643 136.567 49.583 1.00 44.16 O
ATOM 27 O5' C A1301 20.838 134.328 50.592 1.00 38.93 O
TER

ATOM 1 O3' G B1271 6.220 128.012 54.111 1.00 40.73 O
ATOM 2 P A B1272 5.894 129.466 53.523 1.00 42.28 P
ATOM 3 OP1 A B1272 4.895 130.108 54.422 1.00 40.37 O
ATOM 4 OP2 A B1272 5.604 129.330 52.079 1.00 41.07 O
ATOM 5 O5' A B1272 7.267 130.256 53.678 1.00 41.97 O
ATOM 6 C5' A B1272 7.680 130.760 54.955 1.00 42.58 C
ATOM 7 C4' A B1272 8.759 131.799 54.789 1.00 42.10 C
ATOM 8 O4' A B1272 9.975 131.188 54.294 1.00 42.87 O
ATOM 9 C3' A B1272 8.475 132.897 53.785 1.00 43.23 C
ATOM 10 O3' A B1272 7.631 133.893 54.343 1.00 44.88 O
ATOM 11 C2' A B1272 9.874 133.421 53.502 1.00 42.99 C
ATOM 12 O2' A B1272 10.342 134.238 54.555 1.00 43.62 O
ATOM 13 C1' A B1272 10.684 132.123 53.496 1.00 42.11 C
ATOM 14 N9 A B1272 10.875 131.540 52.168 1.00 41.87 N
ATOM 15 C8 A B1272 10.173 130.507 51.597 1.00 42.14 C
ATOM 16 N7 A B1272 10.591 130.181 50.399 1.00 43.13 N
ATOM 17 C5 A B1272 11.640 131.057 50.162 1.00 41.68 C
ATOM 18 C6 A B1272 12.509 131.214 49.069 1.00 42.22 C
ATOM 19 N6 A B1272 12.472 130.445 47.978 1.00 42.02 N
ATOM 20 N1 A B1272 13.436 132.195 49.139 1.00 41.90 N
ATOM 21 C2 A B1272 13.483 132.951 50.245 1.00 41.83 C
ATOM 22 N3 A B1272 12.729 132.891 51.342 1.00 41.05 N
ATOM 23 C4 A B1272 11.816 131.911 51.237 1.00 41.63 C
ATOM 24 P U B1273 6.627 134.711 53.394 1.00 45.69 P
ATOM 25 OP1 U B1273 5.235 134.410 53.808 1.00 43.56 O
ATOM 26 OP2 U B1273 7.044 134.504 51.971 1.00 45.29 O
ATOM 27 O5' U B1273 6.918 136.228 53.767 1.00 44.00 O
TER

Atoms:
OP1: (20.055,142.456,53.894)
OP2: (17.824,142.276,52.643)
C3': (19.612,137.564,52.144)
C1': (17.734,137.050,53.463)
C5': (20.169,139.473,53.753)
O4': (18.666,137.663,54.324)
C8: (15.937,138.537,54.501)
O2': (17.627,136.638,51.088)
C6: (13.061,136.531,54.724)
C5: (14.280,137.207,54.559)
C4: (15.311,136.507,53.956)
P: (18.812,141.698,53.578)
C4': (19.861,138.013,53.574)
C2': (18.090,137.546,52.065)
C2: (14.066,134.711,53.710)
N1: (12.985,135.258,54.281)
N3: (15.267,135.241,53.501)
N6: (11.983,137.076,55.294)
N7: (14.687,138.490,54.895)
N9: (16.387,137.365,53.942)
O5': (19.230,140.271,53.030)
O3': (20.094,136.242,52.010)
OP1: (4.895,130.108,54.422)
OP2: (5.604,129.330,52.079)
C3': (8.475,132.897,53.785)
C1': (10.684,132.123,53.496)
C5': (7.680,130.760,54.955)
O4': (9.975,131.188,54.294)
C8: (10.173,130.507,51.597)
O2': (10.342,134.238,54.555)
C6: (12.509,131.214,49.069)
C5: (11.640,131.057,50.162)
C4: (11.816,131.911,51.237)
P: (5.894,129.466,53.523)
C4': (8.759,131.799,54.789)
C2': (9.874,133.421,53.502)
C2: (13.483,132.951,50.245)
N1: (13.436,132.195,49.139)
N3: (12.729,132.891,51.342)
N6: (12.472,130.445,47.978)
N7: (10.591,130.181,50.399)
N9: (10.875,131.540,52.168)
O5': (7.267,130.256,53.678)
O3': (7.631,133.893,54.343)
Image (generated by PyMOL):
PyMOL image
show in jmol