Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RG5:A55:A52
Extra
PDB:
ATOM 1 O3' G A 54 30.243 8.263 -5.007 1.00 56.45 O
ATOM 2 P C A 55 29.103 7.955 -3.912 1.00 57.05 P
ATOM 3 OP1 C A 55 27.933 7.447 -4.676 1.00 55.87 O
ATOM 4 OP2 C A 55 28.987 9.122 -2.994 1.00 53.77 O
ATOM 5 O5' C A 55 29.671 6.742 -3.043 1.00 53.29 O
ATOM 6 C5' C A 55 29.679 5.418 -3.547 1.00 51.09 C
ATOM 7 C4' C A 55 30.649 4.647 -2.688 1.00 48.90 C
ATOM 8 O4' C A 55 31.957 5.293 -2.711 1.00 47.33 O
ATOM 9 C3' C A 55 30.299 4.646 -1.210 1.00 48.26 C
ATOM 10 O3' C A 55 29.253 3.732 -0.968 1.00 49.91 O
ATOM 11 C2' C A 55 31.648 4.209 -0.656 1.00 47.65 C
ATOM 12 O2' C A 55 31.996 2.880 -0.965 1.00 47.27 O
ATOM 13 C1' C A 55 32.563 5.136 -1.440 1.00 45.12 C
ATOM 14 N1 C A 55 32.760 6.471 -0.809 1.00 44.07 N
ATOM 15 C2 C A 55 33.725 6.649 0.200 1.00 43.74 C
ATOM 16 O2 C A 55 34.409 5.686 0.570 1.00 43.19 O
ATOM 17 N3 C A 55 33.900 7.888 0.737 1.00 41.19 N
ATOM 18 C4 C A 55 33.156 8.910 0.317 1.00 41.99 C
ATOM 19 N4 C A 55 33.343 10.113 0.874 1.00 41.86 N
ATOM 20 C5 C A 55 32.170 8.750 -0.694 1.00 40.62 C
ATOM 21 C6 C A 55 32.008 7.540 -1.213 1.00 42.48 C
ATOM 22 P G A 56 28.548 3.456 0.443 1.00 51.19 P
ATOM 23 OP1 G A 56 29.473 2.665 1.269 1.00 52.15 O
ATOM 24 OP2 G A 56 27.198 2.965 0.132 1.00 52.08 O
ATOM 25 O5' G A 56 28.457 4.743 1.347 1.00 50.59 O
TER
ATOM 1 O3' U B 51 31.713 19.547 2.526 1.00 59.77 O
ATOM 2 P U B 52 32.160 19.517 0.964 1.00 61.25 P
ATOM 3 OP1 U B 52 33.323 20.440 1.003 1.00 60.08 O
ATOM 4 OP2 U B 52 31.053 19.659 -0.016 1.00 58.22 O
ATOM 5 O5' U B 52 32.613 17.994 0.684 1.00 61.45 O
ATOM 6 C5' U B 52 33.844 17.435 1.157 1.00 60.77 C
ATOM 7 C4' U B 52 33.871 15.977 0.746 1.00 60.63 C
ATOM 8 O4' U B 52 32.583 15.384 1.013 1.00 58.83 O
ATOM 9 C3' U B 52 33.994 15.716 -0.747 1.00 60.76 C
ATOM 10 O3' U B 52 35.327 15.863 -1.175 1.00 62.70 O
ATOM 11 C2' U B 52 33.625 14.243 -0.797 1.00 59.59 C
ATOM 12 O2' U B 52 34.695 13.396 -0.411 1.00 56.12 O
ATOM 13 C1' U B 52 32.495 14.211 0.231 1.00 58.82 C
ATOM 14 N1 U B 52 31.165 14.032 -0.438 1.00 58.03 N
ATOM 15 C2 U B 52 30.805 12.727 -0.694 1.00 56.39 C
ATOM 16 O2 U B 52 31.483 11.778 -0.383 1.00 55.63 O
ATOM 17 N3 U B 52 29.604 12.556 -1.314 1.00 58.13 N
ATOM 18 C4 U B 52 28.741 13.551 -1.710 1.00 58.35 C
ATOM 19 O4 U B 52 27.704 13.198 -2.258 1.00 58.62 O
ATOM 20 C5 U B 52 29.170 14.912 -1.425 1.00 57.70 C
ATOM 21 C6 U B 52 30.355 15.105 -0.815 1.00 57.95 C
ATOM 22 P A B 53 35.764 16.891 -2.322 1.00 63.68 P
ATOM 23 OP1 A B 53 37.138 16.452 -2.666 1.00 65.31 O
ATOM 24 OP2 A B 53 35.538 18.259 -1.801 1.00 62.65 O
ATOM 25 O5' A B 53 34.851 16.655 -3.616 1.00 59.27 O
TER
ATOM 2 P C A 55 29.103 7.955 -3.912 1.00 57.05 P
ATOM 3 OP1 C A 55 27.933 7.447 -4.676 1.00 55.87 O
ATOM 4 OP2 C A 55 28.987 9.122 -2.994 1.00 53.77 O
ATOM 5 O5' C A 55 29.671 6.742 -3.043 1.00 53.29 O
ATOM 6 C5' C A 55 29.679 5.418 -3.547 1.00 51.09 C
ATOM 7 C4' C A 55 30.649 4.647 -2.688 1.00 48.90 C
ATOM 8 O4' C A 55 31.957 5.293 -2.711 1.00 47.33 O
ATOM 9 C3' C A 55 30.299 4.646 -1.210 1.00 48.26 C
ATOM 10 O3' C A 55 29.253 3.732 -0.968 1.00 49.91 O
ATOM 11 C2' C A 55 31.648 4.209 -0.656 1.00 47.65 C
ATOM 12 O2' C A 55 31.996 2.880 -0.965 1.00 47.27 O
ATOM 13 C1' C A 55 32.563 5.136 -1.440 1.00 45.12 C
ATOM 14 N1 C A 55 32.760 6.471 -0.809 1.00 44.07 N
ATOM 15 C2 C A 55 33.725 6.649 0.200 1.00 43.74 C
ATOM 16 O2 C A 55 34.409 5.686 0.570 1.00 43.19 O
ATOM 17 N3 C A 55 33.900 7.888 0.737 1.00 41.19 N
ATOM 18 C4 C A 55 33.156 8.910 0.317 1.00 41.99 C
ATOM 19 N4 C A 55 33.343 10.113 0.874 1.00 41.86 N
ATOM 20 C5 C A 55 32.170 8.750 -0.694 1.00 40.62 C
ATOM 21 C6 C A 55 32.008 7.540 -1.213 1.00 42.48 C
ATOM 22 P G A 56 28.548 3.456 0.443 1.00 51.19 P
ATOM 23 OP1 G A 56 29.473 2.665 1.269 1.00 52.15 O
ATOM 24 OP2 G A 56 27.198 2.965 0.132 1.00 52.08 O
ATOM 25 O5' G A 56 28.457 4.743 1.347 1.00 50.59 O
TER
ATOM 1 O3' U B 51 31.713 19.547 2.526 1.00 59.77 O
ATOM 2 P U B 52 32.160 19.517 0.964 1.00 61.25 P
ATOM 3 OP1 U B 52 33.323 20.440 1.003 1.00 60.08 O
ATOM 4 OP2 U B 52 31.053 19.659 -0.016 1.00 58.22 O
ATOM 5 O5' U B 52 32.613 17.994 0.684 1.00 61.45 O
ATOM 6 C5' U B 52 33.844 17.435 1.157 1.00 60.77 C
ATOM 7 C4' U B 52 33.871 15.977 0.746 1.00 60.63 C
ATOM 8 O4' U B 52 32.583 15.384 1.013 1.00 58.83 O
ATOM 9 C3' U B 52 33.994 15.716 -0.747 1.00 60.76 C
ATOM 10 O3' U B 52 35.327 15.863 -1.175 1.00 62.70 O
ATOM 11 C2' U B 52 33.625 14.243 -0.797 1.00 59.59 C
ATOM 12 O2' U B 52 34.695 13.396 -0.411 1.00 56.12 O
ATOM 13 C1' U B 52 32.495 14.211 0.231 1.00 58.82 C
ATOM 14 N1 U B 52 31.165 14.032 -0.438 1.00 58.03 N
ATOM 15 C2 U B 52 30.805 12.727 -0.694 1.00 56.39 C
ATOM 16 O2 U B 52 31.483 11.778 -0.383 1.00 55.63 O
ATOM 17 N3 U B 52 29.604 12.556 -1.314 1.00 58.13 N
ATOM 18 C4 U B 52 28.741 13.551 -1.710 1.00 58.35 C
ATOM 19 O4 U B 52 27.704 13.198 -2.258 1.00 58.62 O
ATOM 20 C5 U B 52 29.170 14.912 -1.425 1.00 57.70 C
ATOM 21 C6 U B 52 30.355 15.105 -0.815 1.00 57.95 C
ATOM 22 P A B 53 35.764 16.891 -2.322 1.00 63.68 P
ATOM 23 OP1 A B 53 37.138 16.452 -2.666 1.00 65.31 O
ATOM 24 OP2 A B 53 35.538 18.259 -1.801 1.00 62.65 O
ATOM 25 O5' A B 53 34.851 16.655 -3.616 1.00 59.27 O
TER
Atoms:
C2: (33.725,6.649,0.200)
OP1: (27.933,7.447,-4.676)
OP2: (28.987,9.122,-2.994)
C4: (33.156,8.910,0.317)
O5': (29.671,6.742,-3.043)
C3': (30.299,4.646,-1.210)
C1': (32.563,5.136,-1.440)
O4': (31.957,5.293,-2.711)
C5': (29.679,5.418,-3.547)
P: (29.103,7.955,-3.912)
O2: (34.409,5.686,0.570)
C4': (30.649,4.647,-2.688)
C2': (31.648,4.209,-0.656)
O2': (31.996,2.880,-0.965)
N1: (32.760,6.471,-0.809)
N3: (33.900,7.888,0.737)
N4: (33.343,10.113,0.874)
C6: (32.008,7.540,-1.213)
C5: (32.170,8.750,-0.694)
O3': (29.253,3.732,-0.968)
OP1: (27.933,7.447,-4.676)
OP2: (28.987,9.122,-2.994)
C4: (33.156,8.910,0.317)
O5': (29.671,6.742,-3.043)
C3': (30.299,4.646,-1.210)
C1': (32.563,5.136,-1.440)
O4': (31.957,5.293,-2.711)
C5': (29.679,5.418,-3.547)
P: (29.103,7.955,-3.912)
O2: (34.409,5.686,0.570)
C4': (30.649,4.647,-2.688)
C2': (31.648,4.209,-0.656)
O2': (31.996,2.880,-0.965)
N1: (32.760,6.471,-0.809)
N3: (33.900,7.888,0.737)
N4: (33.343,10.113,0.874)
C6: (32.008,7.540,-1.213)
C5: (32.170,8.750,-0.694)
O3': (29.253,3.732,-0.968)
C4: (28.741,13.551,-1.710)
N3: (29.604,12.556,-1.314)
OP1: (33.323,20.440,1.003)
OP2: (31.053,19.659,-0.016)
C2: (30.805,12.727,-0.694)
C1': (32.495,14.211,0.231)
C3': (33.994,15.716,-0.747)
O5': (32.613,17.994,0.684)
O4': (32.583,15.384,1.013)
C5': (33.844,17.435,1.157)
P: (32.160,19.517,0.964)
C4': (33.871,15.977,0.746)
C2': (33.625,14.243,-0.797)
O2': (34.695,13.396,-0.411)
N1: (31.165,14.032,-0.438)
O4: (27.704,13.198,-2.258)
O2: (31.483,11.778,-0.383)
C6: (30.355,15.105,-0.815)
C5: (29.170,14.912,-1.425)
O3': (35.327,15.863,-1.175)
N3: (29.604,12.556,-1.314)
OP1: (33.323,20.440,1.003)
OP2: (31.053,19.659,-0.016)
C2: (30.805,12.727,-0.694)
C1': (32.495,14.211,0.231)
C3': (33.994,15.716,-0.747)
O5': (32.613,17.994,0.684)
O4': (32.583,15.384,1.013)
C5': (33.844,17.435,1.157)
P: (32.160,19.517,0.964)
C4': (33.871,15.977,0.746)
C2': (33.625,14.243,-0.797)
O2': (34.695,13.396,-0.411)
N1: (31.165,14.032,-0.438)
O4: (27.704,13.198,-2.258)
O2: (31.483,11.778,-0.383)
C6: (30.355,15.105,-0.815)
C5: (29.170,14.912,-1.425)
O3': (35.327,15.863,-1.175)
Image (generated by PyMOL):