Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2518:2532
Extra
PDB:
ATOM 1 O3' A A 517 -78.674 55.013 17.325 1.00120.43 O
ATOM 2 P C A 518 -78.285 56.498 17.745 1.00117.94 P
ATOM 3 OP1 C A 518 -76.983 56.812 17.093 1.00117.96 O
ATOM 4 OP2 C A 518 -78.379 56.565 19.233 1.00117.44 O
ATOM 5 O5' C A 518 -79.453 57.356 17.090 1.00118.27 O
ATOM 6 C5' C A 518 -80.332 58.116 17.902 1.00118.07 C
ATOM 7 C4' C A 518 -81.235 58.995 17.077 1.00118.42 C
ATOM 8 O4' C A 518 -82.553 58.397 17.002 1.00118.68 O
ATOM 9 C3' C A 518 -81.479 60.390 17.631 1.00118.16 C
ATOM 10 O3' C A 518 -80.452 61.311 17.277 1.00118.07 O
ATOM 11 C2' C A 518 -82.853 60.756 17.074 1.00118.53 C
ATOM 12 O2' C A 518 -82.742 61.283 15.762 1.00118.93 O
ATOM 13 C1' C A 518 -83.546 59.395 17.001 1.00118.75 C
ATOM 14 N1 C A 518 -84.442 59.160 18.147 1.00118.51 N
ATOM 15 C2 C A 518 -85.764 59.608 18.104 1.00118.68 C
ATOM 16 O2 C A 518 -86.183 60.217 17.107 1.00119.04 O
ATOM 17 N3 C A 518 -86.573 59.373 19.156 1.00118.46 N
ATOM 18 C4 C A 518 -86.098 58.722 20.211 1.00118.07 C
ATOM 19 N4 C A 518 -86.927 58.514 21.227 1.00117.86 N
ATOM 20 C5 C A 518 -84.767 58.247 20.287 1.00117.89 C
ATOM 21 C6 C A 518 -83.987 58.483 19.234 1.00118.12 C
ATOM 22 P A A 519 -79.897 62.379 18.356 1.00 99.57 P
ATOM 23 OP1 A A 519 -79.367 63.539 17.590 1.00 99.68 O
ATOM 24 OP2 A A 519 -78.969 61.653 19.274 1.00 99.17 O
ATOM 25 O5' A A 519 -81.227 62.803 19.150 1.00 99.46 O
TER
ATOM 1 O3' U B 531 -91.343 56.783 29.748 1.00110.76 O
ATOM 2 P U B 532 -91.810 55.385 29.083 1.00114.29 P
ATOM 3 OP1 U B 532 -93.288 55.251 29.291 1.00114.45 O
ATOM 4 OP2 U B 532 -90.917 54.330 29.618 1.00114.06 O
ATOM 5 O5' U B 532 -91.514 55.626 27.549 1.00114.75 O
ATOM 6 C5' U B 532 -92.030 56.774 26.914 1.00114.96 C
ATOM 7 C4' U B 532 -91.242 57.137 25.695 1.00115.23 C
ATOM 8 O4' U B 532 -89.854 57.385 26.028 1.00114.90 O
ATOM 9 C3' U B 532 -91.162 56.100 24.622 1.00115.67 C
ATOM 10 O3' U B 532 -92.365 55.988 23.914 1.00116.09 O
ATOM 11 C2' U B 532 -89.994 56.610 23.788 1.00115.74 C
ATOM 12 O2' U B 532 -90.399 57.720 22.998 1.00115.99 O
ATOM 13 C1' U B 532 -89.054 57.122 24.890 1.00115.19 C
ATOM 14 N1 U B 532 -88.003 56.129 25.255 1.00114.98 N
ATOM 15 C2 U B 532 -86.834 56.131 24.534 1.00115.05 C
ATOM 16 O2 U B 532 -86.645 56.900 23.626 1.00115.28 O
ATOM 17 N3 U B 532 -85.891 55.206 24.907 1.00114.86 N
ATOM 18 C4 U B 532 -85.984 54.284 25.937 1.00114.59 C
ATOM 19 O4 U B 532 -85.050 53.511 26.170 1.00114.43 O
ATOM 20 C5 U B 532 -87.222 54.336 26.651 1.00114.52 C
ATOM 21 C6 U B 532 -88.155 55.234 26.289 1.00114.72 C
ATOM 22 P A B 533 -92.527 54.866 22.798 1.00112.02 P
ATOM 23 OP1 A B 533 -93.952 54.437 22.812 1.00112.26 O
ATOM 24 OP2 A B 533 -91.473 53.846 23.040 1.00111.85 O
ATOM 25 O5' A B 533 -92.209 55.684 21.474 1.00112.36 O
TER
ATOM 2 P C A 518 -78.285 56.498 17.745 1.00117.94 P
ATOM 3 OP1 C A 518 -76.983 56.812 17.093 1.00117.96 O
ATOM 4 OP2 C A 518 -78.379 56.565 19.233 1.00117.44 O
ATOM 5 O5' C A 518 -79.453 57.356 17.090 1.00118.27 O
ATOM 6 C5' C A 518 -80.332 58.116 17.902 1.00118.07 C
ATOM 7 C4' C A 518 -81.235 58.995 17.077 1.00118.42 C
ATOM 8 O4' C A 518 -82.553 58.397 17.002 1.00118.68 O
ATOM 9 C3' C A 518 -81.479 60.390 17.631 1.00118.16 C
ATOM 10 O3' C A 518 -80.452 61.311 17.277 1.00118.07 O
ATOM 11 C2' C A 518 -82.853 60.756 17.074 1.00118.53 C
ATOM 12 O2' C A 518 -82.742 61.283 15.762 1.00118.93 O
ATOM 13 C1' C A 518 -83.546 59.395 17.001 1.00118.75 C
ATOM 14 N1 C A 518 -84.442 59.160 18.147 1.00118.51 N
ATOM 15 C2 C A 518 -85.764 59.608 18.104 1.00118.68 C
ATOM 16 O2 C A 518 -86.183 60.217 17.107 1.00119.04 O
ATOM 17 N3 C A 518 -86.573 59.373 19.156 1.00118.46 N
ATOM 18 C4 C A 518 -86.098 58.722 20.211 1.00118.07 C
ATOM 19 N4 C A 518 -86.927 58.514 21.227 1.00117.86 N
ATOM 20 C5 C A 518 -84.767 58.247 20.287 1.00117.89 C
ATOM 21 C6 C A 518 -83.987 58.483 19.234 1.00118.12 C
ATOM 22 P A A 519 -79.897 62.379 18.356 1.00 99.57 P
ATOM 23 OP1 A A 519 -79.367 63.539 17.590 1.00 99.68 O
ATOM 24 OP2 A A 519 -78.969 61.653 19.274 1.00 99.17 O
ATOM 25 O5' A A 519 -81.227 62.803 19.150 1.00 99.46 O
TER
ATOM 1 O3' U B 531 -91.343 56.783 29.748 1.00110.76 O
ATOM 2 P U B 532 -91.810 55.385 29.083 1.00114.29 P
ATOM 3 OP1 U B 532 -93.288 55.251 29.291 1.00114.45 O
ATOM 4 OP2 U B 532 -90.917 54.330 29.618 1.00114.06 O
ATOM 5 O5' U B 532 -91.514 55.626 27.549 1.00114.75 O
ATOM 6 C5' U B 532 -92.030 56.774 26.914 1.00114.96 C
ATOM 7 C4' U B 532 -91.242 57.137 25.695 1.00115.23 C
ATOM 8 O4' U B 532 -89.854 57.385 26.028 1.00114.90 O
ATOM 9 C3' U B 532 -91.162 56.100 24.622 1.00115.67 C
ATOM 10 O3' U B 532 -92.365 55.988 23.914 1.00116.09 O
ATOM 11 C2' U B 532 -89.994 56.610 23.788 1.00115.74 C
ATOM 12 O2' U B 532 -90.399 57.720 22.998 1.00115.99 O
ATOM 13 C1' U B 532 -89.054 57.122 24.890 1.00115.19 C
ATOM 14 N1 U B 532 -88.003 56.129 25.255 1.00114.98 N
ATOM 15 C2 U B 532 -86.834 56.131 24.534 1.00115.05 C
ATOM 16 O2 U B 532 -86.645 56.900 23.626 1.00115.28 O
ATOM 17 N3 U B 532 -85.891 55.206 24.907 1.00114.86 N
ATOM 18 C4 U B 532 -85.984 54.284 25.937 1.00114.59 C
ATOM 19 O4 U B 532 -85.050 53.511 26.170 1.00114.43 O
ATOM 20 C5 U B 532 -87.222 54.336 26.651 1.00114.52 C
ATOM 21 C6 U B 532 -88.155 55.234 26.289 1.00114.72 C
ATOM 22 P A B 533 -92.527 54.866 22.798 1.00112.02 P
ATOM 23 OP1 A B 533 -93.952 54.437 22.812 1.00112.26 O
ATOM 24 OP2 A B 533 -91.473 53.846 23.040 1.00111.85 O
ATOM 25 O5' A B 533 -92.209 55.684 21.474 1.00112.36 O
TER
Atoms:
C2: (-85.764,59.608,18.104)
OP1: (-76.983,56.812,17.093)
OP2: (-78.379,56.565,19.233)
C4: (-86.098,58.722,20.211)
O5': (-79.453,57.356,17.090)
C3': (-81.479,60.390,17.631)
C1': (-83.546,59.395,17.001)
O4': (-82.553,58.397,17.002)
C5': (-80.332,58.116,17.902)
P: (-78.285,56.498,17.745)
O2: (-86.183,60.217,17.107)
C4': (-81.235,58.995,17.077)
C2': (-82.853,60.756,17.074)
O2': (-82.742,61.283,15.762)
N1: (-84.442,59.160,18.147)
N3: (-86.573,59.373,19.156)
N4: (-86.927,58.514,21.227)
C6: (-83.987,58.483,19.234)
C5: (-84.767,58.247,20.287)
O3': (-80.452,61.311,17.277)
OP1: (-76.983,56.812,17.093)
OP2: (-78.379,56.565,19.233)
C4: (-86.098,58.722,20.211)
O5': (-79.453,57.356,17.090)
C3': (-81.479,60.390,17.631)
C1': (-83.546,59.395,17.001)
O4': (-82.553,58.397,17.002)
C5': (-80.332,58.116,17.902)
P: (-78.285,56.498,17.745)
O2: (-86.183,60.217,17.107)
C4': (-81.235,58.995,17.077)
C2': (-82.853,60.756,17.074)
O2': (-82.742,61.283,15.762)
N1: (-84.442,59.160,18.147)
N3: (-86.573,59.373,19.156)
N4: (-86.927,58.514,21.227)
C6: (-83.987,58.483,19.234)
C5: (-84.767,58.247,20.287)
O3': (-80.452,61.311,17.277)
C4: (-85.984,54.284,25.937)
N3: (-85.891,55.206,24.907)
OP1: (-93.288,55.251,29.291)
OP2: (-90.917,54.330,29.618)
C2: (-86.834,56.131,24.534)
C1': (-89.054,57.122,24.890)
C3': (-91.162,56.100,24.622)
O5': (-91.514,55.626,27.549)
O4': (-89.854,57.385,26.028)
C5': (-92.030,56.774,26.914)
P: (-91.810,55.385,29.083)
C4': (-91.242,57.137,25.695)
C2': (-89.994,56.610,23.788)
O2': (-90.399,57.720,22.998)
N1: (-88.003,56.129,25.255)
O4: (-85.050,53.511,26.170)
O2: (-86.645,56.900,23.626)
C6: (-88.155,55.234,26.289)
C5: (-87.222,54.336,26.651)
O3': (-92.365,55.988,23.914)
N3: (-85.891,55.206,24.907)
OP1: (-93.288,55.251,29.291)
OP2: (-90.917,54.330,29.618)
C2: (-86.834,56.131,24.534)
C1': (-89.054,57.122,24.890)
C3': (-91.162,56.100,24.622)
O5': (-91.514,55.626,27.549)
O4': (-89.854,57.385,26.028)
C5': (-92.030,56.774,26.914)
P: (-91.810,55.385,29.083)
C4': (-91.242,57.137,25.695)
C2': (-89.994,56.610,23.788)
O2': (-90.399,57.720,22.998)
N1: (-88.003,56.129,25.255)
O4: (-85.050,53.511,26.170)
O2: (-86.645,56.900,23.626)
C6: (-88.155,55.234,26.289)
C5: (-87.222,54.336,26.651)
O3': (-92.365,55.988,23.914)
Image (generated by PyMOL):