Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0893:01288
Extra
PDB:
ATOM 1 O3' C A 892 29.449 112.931 74.278 1.00 24.77 O
ATOM 2 P C A 893 29.264 111.591 75.150 1.00 23.61 P
ATOM 3 OP1 C A 893 29.301 111.980 76.582 1.00 23.37 O
ATOM 4 OP2 C A 893 30.179 110.539 74.654 1.00 23.67 O
ATOM 5 O5' C A 893 27.789 111.101 74.827 1.00 26.77 O
ATOM 6 C5' C A 893 26.645 111.810 75.328 1.00 28.58 C
ATOM 7 C4' C A 893 25.384 111.045 75.012 1.00 29.05 C
ATOM 8 O4' C A 893 25.274 110.874 73.569 1.00 28.59 O
ATOM 9 C3' C A 893 25.328 109.616 75.528 1.00 29.62 C
ATOM 10 O3' C A 893 24.977 109.509 76.897 1.00 30.24 O
ATOM 11 C2' C A 893 24.265 109.016 74.630 1.00 29.57 C
ATOM 12 O2' C A 893 22.969 109.456 74.984 1.00 28.68 O
ATOM 13 C1' C A 893 24.662 109.625 73.287 1.00 28.52 C
ATOM 14 N1 C A 893 25.632 108.766 72.589 1.00 28.36 N
ATOM 15 C2 C A 893 25.173 107.584 71.991 1.00 29.61 C
ATOM 16 O2 C A 893 23.980 107.272 72.112 1.00 32.79 O
ATOM 17 N3 C A 893 26.040 106.807 71.308 1.00 27.84 N
ATOM 18 C4 C A 893 27.322 107.154 71.228 1.00 26.49 C
ATOM 19 N4 C A 893 28.130 106.362 70.538 1.00 28.00 N
ATOM 20 C5 C A 893 27.827 108.333 71.852 1.00 26.48 C
ATOM 21 C6 C A 893 26.955 109.104 72.514 1.00 27.32 C
ATOM 22 P A A 894 25.494 108.247 77.747 1.00 29.87 P
ATOM 23 OP1 A A 894 25.190 108.553 79.163 1.00 29.40 O
ATOM 24 OP2 A A 894 26.884 107.951 77.339 1.00 29.07 O
ATOM 25 O5' A A 894 24.639 107.000 77.234 1.00 29.32 O
TER
ATOM 1 O3' A B1287 16.379 111.560 80.007 1.00 33.19 O
ATOM 2 P G B1288 16.266 112.897 79.130 1.00 35.43 P
ATOM 3 OP1 G B1288 16.240 114.043 80.066 1.00 34.66 O
ATOM 4 OP2 G B1288 15.148 112.699 78.181 1.00 38.02 O
ATOM 5 O5' G B1288 17.618 112.947 78.289 1.00 34.93 O
ATOM 6 C5' G B1288 18.892 113.054 78.946 1.00 34.12 C
ATOM 7 C4' G B1288 19.988 112.501 78.070 1.00 32.67 C
ATOM 8 O4' G B1288 19.622 111.169 77.636 1.00 31.35 O
ATOM 9 C3' G B1288 20.263 113.250 76.777 1.00 32.54 C
ATOM 10 O3' G B1288 21.129 114.356 77.035 1.00 34.87 O
ATOM 11 C2' G B1288 20.935 112.179 75.926 1.00 32.48 C
ATOM 12 O2' G B1288 22.298 111.975 76.253 1.00 32.68 O
ATOM 13 C1' G B1288 20.159 110.931 76.349 1.00 31.06 C
ATOM 14 N9 G B1288 19.077 110.529 75.457 1.00 29.52 N
ATOM 15 C8 G B1288 17.777 110.973 75.464 1.00 29.97 C
ATOM 16 N7 G B1288 17.031 110.375 74.578 1.00 29.08 N
ATOM 17 C5 G B1288 17.893 109.495 73.942 1.00 29.15 C
ATOM 18 C6 G B1288 17.652 108.577 72.904 1.00 32.20 C
ATOM 19 O6 G B1288 16.589 108.341 72.324 1.00 40.34 O
ATOM 20 N1 G B1288 18.805 107.890 72.545 1.00 31.03 N
ATOM 21 C2 G B1288 20.035 108.066 73.119 1.00 30.78 C
ATOM 22 N2 G B1288 21.035 107.308 72.635 1.00 28.46 N
ATOM 23 N3 G B1288 20.271 108.920 74.097 1.00 29.96 N
ATOM 24 C4 G B1288 19.161 109.593 74.458 1.00 28.34 C
ATOM 25 P A B1289 21.140 115.625 76.049 1.00 33.54 P
ATOM 26 OP1 A B1289 21.852 116.719 76.752 1.00 34.48 O
ATOM 27 OP2 A B1289 19.762 115.848 75.573 1.00 32.08 O
ATOM 28 O5' A B1289 22.027 115.151 74.814 1.00 32.03 O
TER
ATOM 2 P C A 893 29.264 111.591 75.150 1.00 23.61 P
ATOM 3 OP1 C A 893 29.301 111.980 76.582 1.00 23.37 O
ATOM 4 OP2 C A 893 30.179 110.539 74.654 1.00 23.67 O
ATOM 5 O5' C A 893 27.789 111.101 74.827 1.00 26.77 O
ATOM 6 C5' C A 893 26.645 111.810 75.328 1.00 28.58 C
ATOM 7 C4' C A 893 25.384 111.045 75.012 1.00 29.05 C
ATOM 8 O4' C A 893 25.274 110.874 73.569 1.00 28.59 O
ATOM 9 C3' C A 893 25.328 109.616 75.528 1.00 29.62 C
ATOM 10 O3' C A 893 24.977 109.509 76.897 1.00 30.24 O
ATOM 11 C2' C A 893 24.265 109.016 74.630 1.00 29.57 C
ATOM 12 O2' C A 893 22.969 109.456 74.984 1.00 28.68 O
ATOM 13 C1' C A 893 24.662 109.625 73.287 1.00 28.52 C
ATOM 14 N1 C A 893 25.632 108.766 72.589 1.00 28.36 N
ATOM 15 C2 C A 893 25.173 107.584 71.991 1.00 29.61 C
ATOM 16 O2 C A 893 23.980 107.272 72.112 1.00 32.79 O
ATOM 17 N3 C A 893 26.040 106.807 71.308 1.00 27.84 N
ATOM 18 C4 C A 893 27.322 107.154 71.228 1.00 26.49 C
ATOM 19 N4 C A 893 28.130 106.362 70.538 1.00 28.00 N
ATOM 20 C5 C A 893 27.827 108.333 71.852 1.00 26.48 C
ATOM 21 C6 C A 893 26.955 109.104 72.514 1.00 27.32 C
ATOM 22 P A A 894 25.494 108.247 77.747 1.00 29.87 P
ATOM 23 OP1 A A 894 25.190 108.553 79.163 1.00 29.40 O
ATOM 24 OP2 A A 894 26.884 107.951 77.339 1.00 29.07 O
ATOM 25 O5' A A 894 24.639 107.000 77.234 1.00 29.32 O
TER
ATOM 1 O3' A B1287 16.379 111.560 80.007 1.00 33.19 O
ATOM 2 P G B1288 16.266 112.897 79.130 1.00 35.43 P
ATOM 3 OP1 G B1288 16.240 114.043 80.066 1.00 34.66 O
ATOM 4 OP2 G B1288 15.148 112.699 78.181 1.00 38.02 O
ATOM 5 O5' G B1288 17.618 112.947 78.289 1.00 34.93 O
ATOM 6 C5' G B1288 18.892 113.054 78.946 1.00 34.12 C
ATOM 7 C4' G B1288 19.988 112.501 78.070 1.00 32.67 C
ATOM 8 O4' G B1288 19.622 111.169 77.636 1.00 31.35 O
ATOM 9 C3' G B1288 20.263 113.250 76.777 1.00 32.54 C
ATOM 10 O3' G B1288 21.129 114.356 77.035 1.00 34.87 O
ATOM 11 C2' G B1288 20.935 112.179 75.926 1.00 32.48 C
ATOM 12 O2' G B1288 22.298 111.975 76.253 1.00 32.68 O
ATOM 13 C1' G B1288 20.159 110.931 76.349 1.00 31.06 C
ATOM 14 N9 G B1288 19.077 110.529 75.457 1.00 29.52 N
ATOM 15 C8 G B1288 17.777 110.973 75.464 1.00 29.97 C
ATOM 16 N7 G B1288 17.031 110.375 74.578 1.00 29.08 N
ATOM 17 C5 G B1288 17.893 109.495 73.942 1.00 29.15 C
ATOM 18 C6 G B1288 17.652 108.577 72.904 1.00 32.20 C
ATOM 19 O6 G B1288 16.589 108.341 72.324 1.00 40.34 O
ATOM 20 N1 G B1288 18.805 107.890 72.545 1.00 31.03 N
ATOM 21 C2 G B1288 20.035 108.066 73.119 1.00 30.78 C
ATOM 22 N2 G B1288 21.035 107.308 72.635 1.00 28.46 N
ATOM 23 N3 G B1288 20.271 108.920 74.097 1.00 29.96 N
ATOM 24 C4 G B1288 19.161 109.593 74.458 1.00 28.34 C
ATOM 25 P A B1289 21.140 115.625 76.049 1.00 33.54 P
ATOM 26 OP1 A B1289 21.852 116.719 76.752 1.00 34.48 O
ATOM 27 OP2 A B1289 19.762 115.848 75.573 1.00 32.08 O
ATOM 28 O5' A B1289 22.027 115.151 74.814 1.00 32.03 O
TER
Atoms:
C2: (25.173,107.584,71.991)
OP1: (29.301,111.980,76.582)
OP2: (30.179,110.539,74.654)
C4: (27.322,107.154,71.228)
O5': (27.789,111.101,74.827)
C3': (25.328,109.616,75.528)
C1': (24.662,109.625,73.287)
O4': (25.274,110.874,73.569)
C5': (26.645,111.810,75.328)
P: (29.264,111.591,75.150)
O2: (23.980,107.272,72.112)
C4': (25.384,111.045,75.012)
C2': (24.265,109.016,74.630)
O2': (22.969,109.456,74.984)
N1: (25.632,108.766,72.589)
N3: (26.040,106.807,71.308)
N4: (28.130,106.362,70.538)
C6: (26.955,109.104,72.514)
C5: (27.827,108.333,71.852)
O3': (24.977,109.509,76.897)
OP1: (29.301,111.980,76.582)
OP2: (30.179,110.539,74.654)
C4: (27.322,107.154,71.228)
O5': (27.789,111.101,74.827)
C3': (25.328,109.616,75.528)
C1': (24.662,109.625,73.287)
O4': (25.274,110.874,73.569)
C5': (26.645,111.810,75.328)
P: (29.264,111.591,75.150)
O2: (23.980,107.272,72.112)
C4': (25.384,111.045,75.012)
C2': (24.265,109.016,74.630)
O2': (22.969,109.456,74.984)
N1: (25.632,108.766,72.589)
N3: (26.040,106.807,71.308)
N4: (28.130,106.362,70.538)
C6: (26.955,109.104,72.514)
C5: (27.827,108.333,71.852)
O3': (24.977,109.509,76.897)
OP1: (16.240,114.043,80.066)
OP2: (15.148,112.699,78.181)
C3': (20.263,113.250,76.777)
C1': (20.159,110.931,76.349)
C5': (18.892,113.054,78.946)
O6: (16.589,108.341,72.324)
O4': (19.622,111.169,77.636)
C8: (17.777,110.973,75.464)
C2: (20.035,108.066,73.119)
C6: (17.652,108.577,72.904)
C5: (17.893,109.495,73.942)
C4: (19.161,109.593,74.458)
P: (16.266,112.897,79.130)
C4': (19.988,112.501,78.070)
C2': (20.935,112.179,75.926)
O2': (22.298,111.975,76.253)
N1: (18.805,107.890,72.545)
N2: (21.035,107.308,72.635)
N3: (20.271,108.920,74.097)
N7: (17.031,110.375,74.578)
N9: (19.077,110.529,75.457)
O5': (17.618,112.947,78.289)
O3': (21.129,114.356,77.035)
OP2: (15.148,112.699,78.181)
C3': (20.263,113.250,76.777)
C1': (20.159,110.931,76.349)
C5': (18.892,113.054,78.946)
O6: (16.589,108.341,72.324)
O4': (19.622,111.169,77.636)
C8: (17.777,110.973,75.464)
C2: (20.035,108.066,73.119)
C6: (17.652,108.577,72.904)
C5: (17.893,109.495,73.942)
C4: (19.161,109.593,74.458)
P: (16.266,112.897,79.130)
C4': (19.988,112.501,78.070)
C2': (20.935,112.179,75.926)
O2': (22.298,111.975,76.253)
N1: (18.805,107.890,72.545)
N2: (21.035,107.308,72.635)
N3: (20.271,108.920,74.097)
N7: (17.031,110.375,74.578)
N9: (19.077,110.529,75.457)
O5': (17.618,112.947,78.289)
O3': (21.129,114.356,77.035)
Image (generated by PyMOL):