Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0893:01288
Extra
PDB:
ATOM 1 O3' C A 892 29.544 113.223 74.592 1.00 30.67 O
ATOM 2 P C A 893 29.393 111.879 75.456 1.00 30.91 P
ATOM 3 OP1 C A 893 29.454 112.317 76.861 1.00 31.93 O
ATOM 4 OP2 C A 893 30.340 110.866 74.968 1.00 32.95 O
ATOM 5 O5' C A 893 27.925 111.347 75.154 1.00 32.87 O
ATOM 6 C5' C A 893 26.765 112.083 75.605 1.00 35.94 C
ATOM 7 C4' C A 893 25.493 111.327 75.285 1.00 35.65 C
ATOM 8 O4' C A 893 25.348 111.189 73.845 1.00 34.43 O
ATOM 9 C3' C A 893 25.422 109.894 75.788 1.00 36.57 C
ATOM 10 O3' C A 893 25.050 109.803 77.152 1.00 36.31 O
ATOM 11 C2' C A 893 24.365 109.299 74.875 1.00 35.85 C
ATOM 12 O2' C A 893 23.065 109.720 75.232 1.00 36.58 O
ATOM 13 C1' C A 893 24.751 109.937 73.545 1.00 34.33 C
ATOM 14 N1 C A 893 25.731 109.115 72.818 1.00 33.91 N
ATOM 15 C2 C A 893 25.303 107.934 72.210 1.00 35.40 C
ATOM 16 O2 C A 893 24.122 107.598 72.320 1.00 38.73 O
ATOM 17 N3 C A 893 26.185 107.186 71.519 1.00 34.23 N
ATOM 18 C4 C A 893 27.454 107.574 71.428 1.00 33.15 C
ATOM 19 N4 C A 893 28.292 106.812 70.726 1.00 31.31 N
ATOM 20 C5 C A 893 27.923 108.763 72.051 1.00 34.61 C
ATOM 21 C6 C A 893 27.036 109.497 72.730 1.00 33.58 C
ATOM 22 P A A 894 25.541 108.549 78.021 1.00 36.94 P
ATOM 23 OP1 A A 894 25.159 108.846 79.422 1.00 37.13 O
ATOM 24 OP2 A A 894 26.958 108.284 77.678 1.00 36.15 O
ATOM 25 O5' A A 894 24.718 107.293 77.484 1.00 34.31 O
TER
ATOM 1 O3' A B1287 16.541 111.968 80.285 1.00 39.82 O
ATOM 2 P G B1288 16.396 113.306 79.414 1.00 39.72 P
ATOM 3 OP1 G B1288 16.429 114.484 80.313 1.00 36.54 O
ATOM 4 OP2 G B1288 15.237 113.107 78.523 1.00 42.29 O
ATOM 5 O5' G B1288 17.711 113.321 78.516 1.00 41.58 O
ATOM 6 C5' G B1288 19.003 113.464 79.123 1.00 39.16 C
ATOM 7 C4' G B1288 20.063 112.828 78.267 1.00 37.43 C
ATOM 8 O4' G B1288 19.612 111.524 77.843 1.00 36.39 O
ATOM 9 C3' G B1288 20.407 113.532 76.968 1.00 37.51 C
ATOM 10 O3' G B1288 21.342 114.567 77.236 1.00 38.97 O
ATOM 11 C2' G B1288 21.047 112.409 76.163 1.00 38.63 C
ATOM 12 O2' G B1288 22.386 112.140 76.544 1.00 38.85 O
ATOM 13 C1' G B1288 20.195 111.214 76.592 1.00 38.12 C
ATOM 14 N9 G B1288 19.129 110.843 75.670 1.00 37.89 N
ATOM 15 C8 G B1288 17.847 111.334 75.648 1.00 38.45 C
ATOM 16 N7 G B1288 17.088 110.739 74.769 1.00 39.12 N
ATOM 17 C5 G B1288 17.924 109.813 74.162 1.00 38.97 C
ATOM 18 C6 G B1288 17.652 108.859 73.155 1.00 39.36 C
ATOM 19 O6 G B1288 16.574 108.603 72.615 1.00 43.03 O
ATOM 20 N1 G B1288 18.794 108.150 72.798 1.00 38.99 N
ATOM 21 C2 G B1288 20.034 108.321 73.360 1.00 38.45 C
ATOM 22 N2 G B1288 21.019 107.560 72.863 1.00 36.81 N
ATOM 23 N3 G B1288 20.291 109.180 74.333 1.00 38.04 N
ATOM 24 C4 G B1288 19.197 109.889 74.681 1.00 38.13 C
ATOM 25 P A B1289 21.309 115.925 76.387 1.00 39.55 P
ATOM 26 OP1 A B1289 22.063 116.941 77.168 1.00 38.69 O
ATOM 27 OP2 A B1289 19.898 116.195 76.021 1.00 39.12 O
ATOM 28 O5' A B1289 22.129 115.562 75.069 1.00 37.71 O
TER
ATOM 2 P C A 893 29.393 111.879 75.456 1.00 30.91 P
ATOM 3 OP1 C A 893 29.454 112.317 76.861 1.00 31.93 O
ATOM 4 OP2 C A 893 30.340 110.866 74.968 1.00 32.95 O
ATOM 5 O5' C A 893 27.925 111.347 75.154 1.00 32.87 O
ATOM 6 C5' C A 893 26.765 112.083 75.605 1.00 35.94 C
ATOM 7 C4' C A 893 25.493 111.327 75.285 1.00 35.65 C
ATOM 8 O4' C A 893 25.348 111.189 73.845 1.00 34.43 O
ATOM 9 C3' C A 893 25.422 109.894 75.788 1.00 36.57 C
ATOM 10 O3' C A 893 25.050 109.803 77.152 1.00 36.31 O
ATOM 11 C2' C A 893 24.365 109.299 74.875 1.00 35.85 C
ATOM 12 O2' C A 893 23.065 109.720 75.232 1.00 36.58 O
ATOM 13 C1' C A 893 24.751 109.937 73.545 1.00 34.33 C
ATOM 14 N1 C A 893 25.731 109.115 72.818 1.00 33.91 N
ATOM 15 C2 C A 893 25.303 107.934 72.210 1.00 35.40 C
ATOM 16 O2 C A 893 24.122 107.598 72.320 1.00 38.73 O
ATOM 17 N3 C A 893 26.185 107.186 71.519 1.00 34.23 N
ATOM 18 C4 C A 893 27.454 107.574 71.428 1.00 33.15 C
ATOM 19 N4 C A 893 28.292 106.812 70.726 1.00 31.31 N
ATOM 20 C5 C A 893 27.923 108.763 72.051 1.00 34.61 C
ATOM 21 C6 C A 893 27.036 109.497 72.730 1.00 33.58 C
ATOM 22 P A A 894 25.541 108.549 78.021 1.00 36.94 P
ATOM 23 OP1 A A 894 25.159 108.846 79.422 1.00 37.13 O
ATOM 24 OP2 A A 894 26.958 108.284 77.678 1.00 36.15 O
ATOM 25 O5' A A 894 24.718 107.293 77.484 1.00 34.31 O
TER
ATOM 1 O3' A B1287 16.541 111.968 80.285 1.00 39.82 O
ATOM 2 P G B1288 16.396 113.306 79.414 1.00 39.72 P
ATOM 3 OP1 G B1288 16.429 114.484 80.313 1.00 36.54 O
ATOM 4 OP2 G B1288 15.237 113.107 78.523 1.00 42.29 O
ATOM 5 O5' G B1288 17.711 113.321 78.516 1.00 41.58 O
ATOM 6 C5' G B1288 19.003 113.464 79.123 1.00 39.16 C
ATOM 7 C4' G B1288 20.063 112.828 78.267 1.00 37.43 C
ATOM 8 O4' G B1288 19.612 111.524 77.843 1.00 36.39 O
ATOM 9 C3' G B1288 20.407 113.532 76.968 1.00 37.51 C
ATOM 10 O3' G B1288 21.342 114.567 77.236 1.00 38.97 O
ATOM 11 C2' G B1288 21.047 112.409 76.163 1.00 38.63 C
ATOM 12 O2' G B1288 22.386 112.140 76.544 1.00 38.85 O
ATOM 13 C1' G B1288 20.195 111.214 76.592 1.00 38.12 C
ATOM 14 N9 G B1288 19.129 110.843 75.670 1.00 37.89 N
ATOM 15 C8 G B1288 17.847 111.334 75.648 1.00 38.45 C
ATOM 16 N7 G B1288 17.088 110.739 74.769 1.00 39.12 N
ATOM 17 C5 G B1288 17.924 109.813 74.162 1.00 38.97 C
ATOM 18 C6 G B1288 17.652 108.859 73.155 1.00 39.36 C
ATOM 19 O6 G B1288 16.574 108.603 72.615 1.00 43.03 O
ATOM 20 N1 G B1288 18.794 108.150 72.798 1.00 38.99 N
ATOM 21 C2 G B1288 20.034 108.321 73.360 1.00 38.45 C
ATOM 22 N2 G B1288 21.019 107.560 72.863 1.00 36.81 N
ATOM 23 N3 G B1288 20.291 109.180 74.333 1.00 38.04 N
ATOM 24 C4 G B1288 19.197 109.889 74.681 1.00 38.13 C
ATOM 25 P A B1289 21.309 115.925 76.387 1.00 39.55 P
ATOM 26 OP1 A B1289 22.063 116.941 77.168 1.00 38.69 O
ATOM 27 OP2 A B1289 19.898 116.195 76.021 1.00 39.12 O
ATOM 28 O5' A B1289 22.129 115.562 75.069 1.00 37.71 O
TER
Atoms:
C2: (25.303,107.934,72.210)
OP1: (29.454,112.317,76.861)
OP2: (30.340,110.866,74.968)
C4: (27.454,107.574,71.428)
O5': (27.925,111.347,75.154)
C3': (25.422,109.894,75.788)
C1': (24.751,109.937,73.545)
O4': (25.348,111.189,73.845)
C5': (26.765,112.083,75.605)
P: (29.393,111.879,75.456)
O2: (24.122,107.598,72.320)
C4': (25.493,111.327,75.285)
C2': (24.365,109.299,74.875)
O2': (23.065,109.720,75.232)
N1: (25.731,109.115,72.818)
N3: (26.185,107.186,71.519)
N4: (28.292,106.812,70.726)
C6: (27.036,109.497,72.730)
C5: (27.923,108.763,72.051)
O3': (25.050,109.803,77.152)
OP1: (29.454,112.317,76.861)
OP2: (30.340,110.866,74.968)
C4: (27.454,107.574,71.428)
O5': (27.925,111.347,75.154)
C3': (25.422,109.894,75.788)
C1': (24.751,109.937,73.545)
O4': (25.348,111.189,73.845)
C5': (26.765,112.083,75.605)
P: (29.393,111.879,75.456)
O2: (24.122,107.598,72.320)
C4': (25.493,111.327,75.285)
C2': (24.365,109.299,74.875)
O2': (23.065,109.720,75.232)
N1: (25.731,109.115,72.818)
N3: (26.185,107.186,71.519)
N4: (28.292,106.812,70.726)
C6: (27.036,109.497,72.730)
C5: (27.923,108.763,72.051)
O3': (25.050,109.803,77.152)
OP1: (16.429,114.484,80.313)
OP2: (15.237,113.107,78.523)
C3': (20.407,113.532,76.968)
C1': (20.195,111.214,76.592)
C5': (19.003,113.464,79.123)
O6: (16.574,108.603,72.615)
O4': (19.612,111.524,77.843)
C8: (17.847,111.334,75.648)
C2: (20.034,108.321,73.360)
C6: (17.652,108.859,73.155)
C5: (17.924,109.813,74.162)
C4: (19.197,109.889,74.681)
P: (16.396,113.306,79.414)
C4': (20.063,112.828,78.267)
C2': (21.047,112.409,76.163)
O2': (22.386,112.140,76.544)
N1: (18.794,108.150,72.798)
N2: (21.019,107.560,72.863)
N3: (20.291,109.180,74.333)
N7: (17.088,110.739,74.769)
N9: (19.129,110.843,75.670)
O5': (17.711,113.321,78.516)
O3': (21.342,114.567,77.236)
OP2: (15.237,113.107,78.523)
C3': (20.407,113.532,76.968)
C1': (20.195,111.214,76.592)
C5': (19.003,113.464,79.123)
O6: (16.574,108.603,72.615)
O4': (19.612,111.524,77.843)
C8: (17.847,111.334,75.648)
C2: (20.034,108.321,73.360)
C6: (17.652,108.859,73.155)
C5: (17.924,109.813,74.162)
C4: (19.197,109.889,74.681)
P: (16.396,113.306,79.414)
C4': (20.063,112.828,78.267)
C2': (21.047,112.409,76.163)
O2': (22.386,112.140,76.544)
N1: (18.794,108.150,72.798)
N2: (21.019,107.560,72.863)
N3: (20.291,109.180,74.333)
N7: (17.088,110.739,74.769)
N9: (19.129,110.843,75.670)
O5': (17.711,113.321,78.516)
O3': (21.342,114.567,77.236)
Image (generated by PyMOL):