Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0893:01288
Extra
PDB:
ATOM 1 O3' C A 892 29.415 113.050 74.252 1.00 27.04 O
ATOM 2 P C A 893 29.167 111.737 75.147 1.00 29.37 P
ATOM 3 OP1 C A 893 29.147 112.179 76.566 1.00 26.70 O
ATOM 4 OP2 C A 893 30.117 110.685 74.720 1.00 27.71 O
ATOM 5 O5' C A 893 27.698 111.246 74.774 1.00 30.16 O
ATOM 6 C5' C A 893 26.537 111.895 75.335 1.00 31.43 C
ATOM 7 C4' C A 893 25.272 111.134 74.990 1.00 31.12 C
ATOM 8 O4' C A 893 25.157 110.999 73.546 1.00 29.92 O
ATOM 9 C3' C A 893 25.184 109.701 75.478 1.00 30.37 C
ATOM 10 O3' C A 893 24.808 109.588 76.836 1.00 30.48 O
ATOM 11 C2' C A 893 24.130 109.132 74.549 1.00 29.30 C
ATOM 12 O2' C A 893 22.836 109.594 74.865 1.00 25.69 O
ATOM 13 C1' C A 893 24.564 109.752 73.228 1.00 28.54 C
ATOM 14 N1 C A 893 25.569 108.914 72.556 1.00 29.48 N
ATOM 15 C2 C A 893 25.155 107.724 71.947 1.00 31.52 C
ATOM 16 O2 C A 893 23.966 107.389 72.033 1.00 36.16 O
ATOM 17 N3 C A 893 26.058 106.965 71.289 1.00 30.46 N
ATOM 18 C4 C A 893 27.333 107.343 71.242 1.00 29.69 C
ATOM 19 N4 C A 893 28.187 106.564 70.586 1.00 27.57 N
ATOM 20 C5 C A 893 27.788 108.538 71.870 1.00 29.77 C
ATOM 21 C6 C A 893 26.882 109.285 72.512 1.00 29.15 C
ATOM 22 P A A 894 25.398 108.379 77.714 1.00 32.49 P
ATOM 23 OP1 A A 894 25.061 108.685 79.125 1.00 31.81 O
ATOM 24 OP2 A A 894 26.811 108.182 77.325 1.00 30.21 O
ATOM 25 O5' A A 894 24.601 107.085 77.232 1.00 29.16 O
TER
ATOM 1 O3' A B1287 16.370 111.711 79.979 1.00 35.26 O
ATOM 2 P G B1288 16.261 113.069 79.132 1.00 37.14 P
ATOM 3 OP1 G B1288 16.277 114.216 80.070 1.00 34.80 O
ATOM 4 OP2 G B1288 15.119 112.900 78.210 1.00 40.17 O
ATOM 5 O5' G B1288 17.592 113.090 78.256 1.00 37.37 O
ATOM 6 C5' G B1288 18.882 113.195 78.886 1.00 37.58 C
ATOM 7 C4' G B1288 19.959 112.633 77.991 1.00 35.76 C
ATOM 8 O4' G B1288 19.567 111.312 77.559 1.00 32.87 O
ATOM 9 C3' G B1288 20.231 113.387 76.700 1.00 35.72 C
ATOM 10 O3' G B1288 21.145 114.458 76.951 1.00 37.41 O
ATOM 11 C2' G B1288 20.871 112.313 75.833 1.00 35.49 C
ATOM 12 O2' G B1288 22.245 112.130 76.132 1.00 36.18 O
ATOM 13 C1' G B1288 20.093 111.068 76.272 1.00 34.55 C
ATOM 14 N9 G B1288 19.000 110.650 75.399 1.00 33.78 N
ATOM 15 C8 G B1288 17.700 111.093 75.417 1.00 33.78 C
ATOM 16 N7 G B1288 16.943 110.493 74.540 1.00 32.81 N
ATOM 17 C5 G B1288 17.797 109.606 73.899 1.00 33.46 C
ATOM 18 C6 G B1288 17.544 108.680 72.862 1.00 35.14 C
ATOM 19 O6 G B1288 16.473 108.442 72.284 1.00 40.08 O
ATOM 20 N1 G B1288 18.694 107.986 72.502 1.00 33.70 N
ATOM 21 C2 G B1288 19.926 108.157 73.072 1.00 34.35 C
ATOM 22 N2 G B1288 20.917 107.388 72.595 1.00 34.52 N
ATOM 23 N3 G B1288 20.173 109.014 74.043 1.00 34.27 N
ATOM 24 C4 G B1288 19.071 109.700 74.406 1.00 33.29 C
ATOM 25 P A B1289 21.094 115.794 76.061 1.00 36.73 P
ATOM 26 OP1 A B1289 21.803 116.853 76.822 1.00 35.59 O
ATOM 27 OP2 A B1289 19.690 116.009 75.666 1.00 37.69 O
ATOM 28 O5' A B1289 21.934 115.425 74.758 1.00 34.24 O
TER
ATOM 2 P C A 893 29.167 111.737 75.147 1.00 29.37 P
ATOM 3 OP1 C A 893 29.147 112.179 76.566 1.00 26.70 O
ATOM 4 OP2 C A 893 30.117 110.685 74.720 1.00 27.71 O
ATOM 5 O5' C A 893 27.698 111.246 74.774 1.00 30.16 O
ATOM 6 C5' C A 893 26.537 111.895 75.335 1.00 31.43 C
ATOM 7 C4' C A 893 25.272 111.134 74.990 1.00 31.12 C
ATOM 8 O4' C A 893 25.157 110.999 73.546 1.00 29.92 O
ATOM 9 C3' C A 893 25.184 109.701 75.478 1.00 30.37 C
ATOM 10 O3' C A 893 24.808 109.588 76.836 1.00 30.48 O
ATOM 11 C2' C A 893 24.130 109.132 74.549 1.00 29.30 C
ATOM 12 O2' C A 893 22.836 109.594 74.865 1.00 25.69 O
ATOM 13 C1' C A 893 24.564 109.752 73.228 1.00 28.54 C
ATOM 14 N1 C A 893 25.569 108.914 72.556 1.00 29.48 N
ATOM 15 C2 C A 893 25.155 107.724 71.947 1.00 31.52 C
ATOM 16 O2 C A 893 23.966 107.389 72.033 1.00 36.16 O
ATOM 17 N3 C A 893 26.058 106.965 71.289 1.00 30.46 N
ATOM 18 C4 C A 893 27.333 107.343 71.242 1.00 29.69 C
ATOM 19 N4 C A 893 28.187 106.564 70.586 1.00 27.57 N
ATOM 20 C5 C A 893 27.788 108.538 71.870 1.00 29.77 C
ATOM 21 C6 C A 893 26.882 109.285 72.512 1.00 29.15 C
ATOM 22 P A A 894 25.398 108.379 77.714 1.00 32.49 P
ATOM 23 OP1 A A 894 25.061 108.685 79.125 1.00 31.81 O
ATOM 24 OP2 A A 894 26.811 108.182 77.325 1.00 30.21 O
ATOM 25 O5' A A 894 24.601 107.085 77.232 1.00 29.16 O
TER
ATOM 1 O3' A B1287 16.370 111.711 79.979 1.00 35.26 O
ATOM 2 P G B1288 16.261 113.069 79.132 1.00 37.14 P
ATOM 3 OP1 G B1288 16.277 114.216 80.070 1.00 34.80 O
ATOM 4 OP2 G B1288 15.119 112.900 78.210 1.00 40.17 O
ATOM 5 O5' G B1288 17.592 113.090 78.256 1.00 37.37 O
ATOM 6 C5' G B1288 18.882 113.195 78.886 1.00 37.58 C
ATOM 7 C4' G B1288 19.959 112.633 77.991 1.00 35.76 C
ATOM 8 O4' G B1288 19.567 111.312 77.559 1.00 32.87 O
ATOM 9 C3' G B1288 20.231 113.387 76.700 1.00 35.72 C
ATOM 10 O3' G B1288 21.145 114.458 76.951 1.00 37.41 O
ATOM 11 C2' G B1288 20.871 112.313 75.833 1.00 35.49 C
ATOM 12 O2' G B1288 22.245 112.130 76.132 1.00 36.18 O
ATOM 13 C1' G B1288 20.093 111.068 76.272 1.00 34.55 C
ATOM 14 N9 G B1288 19.000 110.650 75.399 1.00 33.78 N
ATOM 15 C8 G B1288 17.700 111.093 75.417 1.00 33.78 C
ATOM 16 N7 G B1288 16.943 110.493 74.540 1.00 32.81 N
ATOM 17 C5 G B1288 17.797 109.606 73.899 1.00 33.46 C
ATOM 18 C6 G B1288 17.544 108.680 72.862 1.00 35.14 C
ATOM 19 O6 G B1288 16.473 108.442 72.284 1.00 40.08 O
ATOM 20 N1 G B1288 18.694 107.986 72.502 1.00 33.70 N
ATOM 21 C2 G B1288 19.926 108.157 73.072 1.00 34.35 C
ATOM 22 N2 G B1288 20.917 107.388 72.595 1.00 34.52 N
ATOM 23 N3 G B1288 20.173 109.014 74.043 1.00 34.27 N
ATOM 24 C4 G B1288 19.071 109.700 74.406 1.00 33.29 C
ATOM 25 P A B1289 21.094 115.794 76.061 1.00 36.73 P
ATOM 26 OP1 A B1289 21.803 116.853 76.822 1.00 35.59 O
ATOM 27 OP2 A B1289 19.690 116.009 75.666 1.00 37.69 O
ATOM 28 O5' A B1289 21.934 115.425 74.758 1.00 34.24 O
TER
Atoms:
C2: (25.155,107.724,71.947)
OP1: (29.147,112.179,76.566)
OP2: (30.117,110.685,74.720)
C4: (27.333,107.343,71.242)
O5': (27.698,111.246,74.774)
C3': (25.184,109.701,75.478)
C1': (24.564,109.752,73.228)
O4': (25.157,110.999,73.546)
C5': (26.537,111.895,75.335)
P: (29.167,111.737,75.147)
O2: (23.966,107.389,72.033)
C4': (25.272,111.134,74.990)
C2': (24.130,109.132,74.549)
O2': (22.836,109.594,74.865)
N1: (25.569,108.914,72.556)
N3: (26.058,106.965,71.289)
N4: (28.187,106.564,70.586)
C6: (26.882,109.285,72.512)
C5: (27.788,108.538,71.870)
O3': (24.808,109.588,76.836)
OP1: (29.147,112.179,76.566)
OP2: (30.117,110.685,74.720)
C4: (27.333,107.343,71.242)
O5': (27.698,111.246,74.774)
C3': (25.184,109.701,75.478)
C1': (24.564,109.752,73.228)
O4': (25.157,110.999,73.546)
C5': (26.537,111.895,75.335)
P: (29.167,111.737,75.147)
O2: (23.966,107.389,72.033)
C4': (25.272,111.134,74.990)
C2': (24.130,109.132,74.549)
O2': (22.836,109.594,74.865)
N1: (25.569,108.914,72.556)
N3: (26.058,106.965,71.289)
N4: (28.187,106.564,70.586)
C6: (26.882,109.285,72.512)
C5: (27.788,108.538,71.870)
O3': (24.808,109.588,76.836)
OP1: (16.277,114.216,80.070)
OP2: (15.119,112.900,78.210)
C3': (20.231,113.387,76.700)
C1': (20.093,111.068,76.272)
C5': (18.882,113.195,78.886)
O6: (16.473,108.442,72.284)
O4': (19.567,111.312,77.559)
C8: (17.700,111.093,75.417)
C2: (19.926,108.157,73.072)
C6: (17.544,108.680,72.862)
C5: (17.797,109.606,73.899)
C4: (19.071,109.700,74.406)
P: (16.261,113.069,79.132)
C4': (19.959,112.633,77.991)
C2': (20.871,112.313,75.833)
O2': (22.245,112.130,76.132)
N1: (18.694,107.986,72.502)
N2: (20.917,107.388,72.595)
N3: (20.173,109.014,74.043)
N7: (16.943,110.493,74.540)
N9: (19.000,110.650,75.399)
O5': (17.592,113.090,78.256)
O3': (21.145,114.458,76.951)
OP2: (15.119,112.900,78.210)
C3': (20.231,113.387,76.700)
C1': (20.093,111.068,76.272)
C5': (18.882,113.195,78.886)
O6: (16.473,108.442,72.284)
O4': (19.567,111.312,77.559)
C8: (17.700,111.093,75.417)
C2: (19.926,108.157,73.072)
C6: (17.544,108.680,72.862)
C5: (17.797,109.606,73.899)
C4: (19.071,109.700,74.406)
P: (16.261,113.069,79.132)
C4': (19.959,112.633,77.991)
C2': (20.871,112.313,75.833)
O2': (22.245,112.130,76.132)
N1: (18.694,107.986,72.502)
N2: (20.917,107.388,72.595)
N3: (20.173,109.014,74.043)
N7: (16.943,110.493,74.540)
N9: (19.000,110.650,75.399)
O5': (17.592,113.090,78.256)
O3': (21.145,114.458,76.951)
Image (generated by PyMOL):