Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2YIE:Z26:Z5
Extra
PDB:
ATOM 1 O3' C A 25 28.837 -67.307 -71.907 1.00 72.62 O
ATOM 2 P C A 26 27.912 -68.610 -72.072 1.00 69.95 P
ATOM 3 OP1 C A 26 28.236 -69.215 -73.387 1.00 78.09 O
ATOM 4 OP2 C A 26 28.091 -69.430 -70.847 1.00 81.24 O
ATOM 5 O5' C A 26 26.443 -67.996 -72.102 1.00 66.67 O
ATOM 6 C5' C A 26 25.878 -67.405 -70.942 1.00 65.69 C
ATOM 7 C4' C A 26 24.474 -66.915 -71.197 1.00 62.76 C
ATOM 8 O4' C A 26 24.472 -65.980 -72.300 1.00 61.70 O
ATOM 9 C3' C A 26 23.461 -67.975 -71.596 1.00 64.35 C
ATOM 10 O3' C A 26 22.922 -68.647 -70.471 1.00 67.13 O
ATOM 11 C2' C A 26 22.417 -67.179 -72.379 1.00 61.71 C
ATOM 12 O2' C A 26 21.485 -66.582 -71.496 1.00 62.66 O
ATOM 13 C1' C A 26 23.254 -66.063 -73.002 1.00 60.27 C
ATOM 14 N1 C A 26 23.541 -66.281 -74.444 1.00 67.70 N
ATOM 15 C2 C A 26 22.537 -66.029 -75.400 1.00 68.65 C
ATOM 16 O2 C A 26 21.404 -65.681 -75.023 1.00 68.05 O
ATOM 17 N3 C A 26 22.813 -66.191 -76.720 1.00 70.65 N
ATOM 18 C4 C A 26 24.035 -66.570 -77.101 1.00 72.42 C
ATOM 19 N4 C A 26 24.273 -66.725 -78.408 1.00 74.61 N
ATOM 20 C5 C A 26 25.071 -66.811 -76.151 1.00 71.38 C
ATOM 21 C6 C A 26 24.791 -66.651 -74.852 1.00 67.40 C
ATOM 22 P G A 27 22.829 -70.252 -70.432 1.00 68.10 P
ATOM 23 OP1 G A 27 23.651 -70.771 -71.552 1.00 68.08 O
ATOM 24 OP2 G A 27 23.162 -70.671 -69.045 1.00 71.82 O
ATOM 25 O5' G A 27 21.286 -70.514 -70.727 1.00 66.96 O
TER
ATOM 1 O3' U B 4 16.496 -67.481 -65.162 1.00194.71 O
ATOM 2 P G B 5 18.065 -67.331 -64.846 1.00136.71 P
ATOM 3 OP1 G B 5 18.244 -67.530 -63.386 1.00138.56 O
ATOM 4 OP2 G B 5 18.785 -68.234 -65.779 1.00143.94 O
ATOM 5 O5' G B 5 18.354 -65.812 -65.227 1.00116.63 O
ATOM 6 C5' G B 5 19.681 -65.320 -65.298 1.00 95.02 C
ATOM 7 C4' G B 5 20.382 -65.804 -66.541 1.00 88.18 C
ATOM 8 O4' G B 5 19.410 -66.107 -67.566 1.00 89.03 O
ATOM 9 C3' G B 5 21.336 -64.814 -67.181 1.00 75.04 C
ATOM 10 O3' G B 5 22.627 -64.883 -66.610 1.00 71.66 O
ATOM 11 C2' G B 5 21.312 -65.189 -68.658 1.00 76.75 C
ATOM 12 O2' G B 5 22.239 -66.231 -68.921 1.00 86.05 O
ATOM 13 C1' G B 5 19.901 -65.746 -68.833 1.00 81.55 C
ATOM 14 N9 G B 5 18.961 -64.779 -69.427 1.00 75.60 N
ATOM 15 C8 G B 5 18.282 -63.806 -68.739 1.00 71.29 C
ATOM 16 N7 G B 5 17.459 -63.123 -69.486 1.00 69.68 N
ATOM 17 C5 G B 5 17.579 -63.698 -70.741 1.00 72.31 C
ATOM 18 C6 G B 5 16.920 -63.374 -71.957 1.00 72.09 C
ATOM 19 O6 G B 5 16.081 -62.486 -72.159 1.00 71.64 O
ATOM 20 N1 G B 5 17.327 -64.200 -73.001 1.00 70.97 N
ATOM 21 C2 G B 5 18.250 -65.208 -72.884 1.00 73.83 C
ATOM 22 N2 G B 5 18.509 -65.893 -74.008 1.00 74.01 N
ATOM 23 N3 G B 5 18.869 -65.520 -71.752 1.00 79.43 N
ATOM 24 C4 G B 5 18.491 -64.732 -70.723 1.00 76.39 C
ATOM 25 P A B 6 23.294 -63.583 -65.957 1.00 82.53 P
ATOM 26 OP1 A B 6 24.014 -64.031 -64.740 1.00 83.70 O
ATOM 27 OP2 A B 6 22.229 -62.559 -65.821 1.00 71.59 O
ATOM 28 O5' A B 6 24.336 -63.136 -67.069 1.00 80.00 O
TER
ATOM 2 P C A 26 27.912 -68.610 -72.072 1.00 69.95 P
ATOM 3 OP1 C A 26 28.236 -69.215 -73.387 1.00 78.09 O
ATOM 4 OP2 C A 26 28.091 -69.430 -70.847 1.00 81.24 O
ATOM 5 O5' C A 26 26.443 -67.996 -72.102 1.00 66.67 O
ATOM 6 C5' C A 26 25.878 -67.405 -70.942 1.00 65.69 C
ATOM 7 C4' C A 26 24.474 -66.915 -71.197 1.00 62.76 C
ATOM 8 O4' C A 26 24.472 -65.980 -72.300 1.00 61.70 O
ATOM 9 C3' C A 26 23.461 -67.975 -71.596 1.00 64.35 C
ATOM 10 O3' C A 26 22.922 -68.647 -70.471 1.00 67.13 O
ATOM 11 C2' C A 26 22.417 -67.179 -72.379 1.00 61.71 C
ATOM 12 O2' C A 26 21.485 -66.582 -71.496 1.00 62.66 O
ATOM 13 C1' C A 26 23.254 -66.063 -73.002 1.00 60.27 C
ATOM 14 N1 C A 26 23.541 -66.281 -74.444 1.00 67.70 N
ATOM 15 C2 C A 26 22.537 -66.029 -75.400 1.00 68.65 C
ATOM 16 O2 C A 26 21.404 -65.681 -75.023 1.00 68.05 O
ATOM 17 N3 C A 26 22.813 -66.191 -76.720 1.00 70.65 N
ATOM 18 C4 C A 26 24.035 -66.570 -77.101 1.00 72.42 C
ATOM 19 N4 C A 26 24.273 -66.725 -78.408 1.00 74.61 N
ATOM 20 C5 C A 26 25.071 -66.811 -76.151 1.00 71.38 C
ATOM 21 C6 C A 26 24.791 -66.651 -74.852 1.00 67.40 C
ATOM 22 P G A 27 22.829 -70.252 -70.432 1.00 68.10 P
ATOM 23 OP1 G A 27 23.651 -70.771 -71.552 1.00 68.08 O
ATOM 24 OP2 G A 27 23.162 -70.671 -69.045 1.00 71.82 O
ATOM 25 O5' G A 27 21.286 -70.514 -70.727 1.00 66.96 O
TER
ATOM 1 O3' U B 4 16.496 -67.481 -65.162 1.00194.71 O
ATOM 2 P G B 5 18.065 -67.331 -64.846 1.00136.71 P
ATOM 3 OP1 G B 5 18.244 -67.530 -63.386 1.00138.56 O
ATOM 4 OP2 G B 5 18.785 -68.234 -65.779 1.00143.94 O
ATOM 5 O5' G B 5 18.354 -65.812 -65.227 1.00116.63 O
ATOM 6 C5' G B 5 19.681 -65.320 -65.298 1.00 95.02 C
ATOM 7 C4' G B 5 20.382 -65.804 -66.541 1.00 88.18 C
ATOM 8 O4' G B 5 19.410 -66.107 -67.566 1.00 89.03 O
ATOM 9 C3' G B 5 21.336 -64.814 -67.181 1.00 75.04 C
ATOM 10 O3' G B 5 22.627 -64.883 -66.610 1.00 71.66 O
ATOM 11 C2' G B 5 21.312 -65.189 -68.658 1.00 76.75 C
ATOM 12 O2' G B 5 22.239 -66.231 -68.921 1.00 86.05 O
ATOM 13 C1' G B 5 19.901 -65.746 -68.833 1.00 81.55 C
ATOM 14 N9 G B 5 18.961 -64.779 -69.427 1.00 75.60 N
ATOM 15 C8 G B 5 18.282 -63.806 -68.739 1.00 71.29 C
ATOM 16 N7 G B 5 17.459 -63.123 -69.486 1.00 69.68 N
ATOM 17 C5 G B 5 17.579 -63.698 -70.741 1.00 72.31 C
ATOM 18 C6 G B 5 16.920 -63.374 -71.957 1.00 72.09 C
ATOM 19 O6 G B 5 16.081 -62.486 -72.159 1.00 71.64 O
ATOM 20 N1 G B 5 17.327 -64.200 -73.001 1.00 70.97 N
ATOM 21 C2 G B 5 18.250 -65.208 -72.884 1.00 73.83 C
ATOM 22 N2 G B 5 18.509 -65.893 -74.008 1.00 74.01 N
ATOM 23 N3 G B 5 18.869 -65.520 -71.752 1.00 79.43 N
ATOM 24 C4 G B 5 18.491 -64.732 -70.723 1.00 76.39 C
ATOM 25 P A B 6 23.294 -63.583 -65.957 1.00 82.53 P
ATOM 26 OP1 A B 6 24.014 -64.031 -64.740 1.00 83.70 O
ATOM 27 OP2 A B 6 22.229 -62.559 -65.821 1.00 71.59 O
ATOM 28 O5' A B 6 24.336 -63.136 -67.069 1.00 80.00 O
TER
Atoms:
C2: (22.537,-66.029,-75.400)
OP1: (28.236,-69.215,-73.387)
OP2: (28.091,-69.430,-70.847)
C4: (24.035,-66.570,-77.101)
O5': (26.443,-67.996,-72.102)
C3': (23.461,-67.975,-71.596)
C1': (23.254,-66.063,-73.002)
O4': (24.472,-65.980,-72.300)
C5': (25.878,-67.405,-70.942)
P: (27.912,-68.610,-72.072)
O2: (21.404,-65.681,-75.023)
C4': (24.474,-66.915,-71.197)
C2': (22.417,-67.179,-72.379)
O2': (21.485,-66.582,-71.496)
N1: (23.541,-66.281,-74.444)
N3: (22.813,-66.191,-76.720)
N4: (24.273,-66.725,-78.408)
C6: (24.791,-66.651,-74.852)
C5: (25.071,-66.811,-76.151)
O3': (22.922,-68.647,-70.471)
OP1: (28.236,-69.215,-73.387)
OP2: (28.091,-69.430,-70.847)
C4: (24.035,-66.570,-77.101)
O5': (26.443,-67.996,-72.102)
C3': (23.461,-67.975,-71.596)
C1': (23.254,-66.063,-73.002)
O4': (24.472,-65.980,-72.300)
C5': (25.878,-67.405,-70.942)
P: (27.912,-68.610,-72.072)
O2: (21.404,-65.681,-75.023)
C4': (24.474,-66.915,-71.197)
C2': (22.417,-67.179,-72.379)
O2': (21.485,-66.582,-71.496)
N1: (23.541,-66.281,-74.444)
N3: (22.813,-66.191,-76.720)
N4: (24.273,-66.725,-78.408)
C6: (24.791,-66.651,-74.852)
C5: (25.071,-66.811,-76.151)
O3': (22.922,-68.647,-70.471)
OP1: (18.244,-67.530,-63.386)
OP2: (18.785,-68.234,-65.779)
C3': (21.336,-64.814,-67.181)
C1': (19.901,-65.746,-68.833)
C5': (19.681,-65.320,-65.298)
O6: (16.081,-62.486,-72.159)
O4': (19.410,-66.107,-67.566)
C8: (18.282,-63.806,-68.739)
C2: (18.250,-65.208,-72.884)
C6: (16.920,-63.374,-71.957)
C5: (17.579,-63.698,-70.741)
C4: (18.491,-64.732,-70.723)
P: (18.065,-67.331,-64.846)
C4': (20.382,-65.804,-66.541)
C2': (21.312,-65.189,-68.658)
O2': (22.239,-66.231,-68.921)
N1: (17.327,-64.200,-73.001)
N2: (18.509,-65.893,-74.008)
N3: (18.869,-65.520,-71.752)
N7: (17.459,-63.123,-69.486)
N9: (18.961,-64.779,-69.427)
O5': (18.354,-65.812,-65.227)
O3': (22.627,-64.883,-66.610)
OP2: (18.785,-68.234,-65.779)
C3': (21.336,-64.814,-67.181)
C1': (19.901,-65.746,-68.833)
C5': (19.681,-65.320,-65.298)
O6: (16.081,-62.486,-72.159)
O4': (19.410,-66.107,-67.566)
C8: (18.282,-63.806,-68.739)
C2: (18.250,-65.208,-72.884)
C6: (16.920,-63.374,-71.957)
C5: (17.579,-63.698,-70.741)
C4: (18.491,-64.732,-70.723)
P: (18.065,-67.331,-64.846)
C4': (20.382,-65.804,-66.541)
C2': (21.312,-65.189,-68.658)
O2': (22.239,-66.231,-68.921)
N1: (17.327,-64.200,-73.001)
N2: (18.509,-65.893,-74.008)
N3: (18.869,-65.520,-71.752)
N7: (17.459,-63.123,-69.486)
N9: (18.961,-64.779,-69.427)
O5': (18.354,-65.812,-65.227)
O3': (22.627,-64.883,-66.610)
Image (generated by PyMOL):