Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1007:A1110
Extra
PDB:
ATOM 1 O3' U A1006 120.330-102.306 -8.420 1.00 45.60 O
ATOM 2 P A A1007 120.312-101.228 -7.239 1.00 52.52 P
ATOM 3 OP1 A A1007 121.698-100.906 -6.825 1.00 56.38 O
ATOM 4 OP2 A A1007 119.353-101.750 -6.228 1.00 55.78 O
ATOM 5 O5' A A1007 119.696 -99.935 -7.944 1.00 52.44 O
ATOM 6 C5' A A1007 120.074 -99.570 -9.274 1.00 48.34 C
ATOM 7 C4' A A1007 119.410 -98.269 -9.669 1.00 45.71 C
ATOM 8 O4' A A1007 118.134 -98.510 -10.313 1.00 46.37 O
ATOM 9 C3' A A1007 119.083 -97.352 -8.511 1.00 50.61 C
ATOM 10 O3' A A1007 120.207 -96.612 -8.065 1.00 57.43 O
ATOM 11 C2' A A1007 117.949 -96.493 -9.057 1.00 55.64 C
ATOM 12 O2' A A1007 118.401 -95.392 -9.828 1.00 51.99 O
ATOM 13 C1' A A1007 117.207 -97.496 -9.946 1.00 53.91 C
ATOM 14 N9 A A1007 116.038 -98.142 -9.320 1.00 55.78 N
ATOM 15 C8 A A1007 116.042 -99.291 -8.564 1.00 54.86 C
ATOM 16 N7 A A1007 114.849 -99.683 -8.181 1.00 52.49 N
ATOM 17 C5 A A1007 113.993 -98.724 -8.711 1.00 55.06 C
ATOM 18 C6 A A1007 112.580 -98.581 -8.681 1.00 51.60 C
ATOM 19 N6 A A1007 111.751 -99.452 -8.098 1.00 49.82 N
ATOM 20 N1 A A1007 112.047 -97.504 -9.292 1.00 49.00 N
ATOM 21 C2 A A1007 112.867 -96.640 -9.900 1.00 50.83 C
ATOM 22 N3 A A1007 114.198 -96.672 -10.016 1.00 54.50 N
ATOM 23 C4 A A1007 114.710 -97.752 -9.394 1.00 56.68 C
ATOM 24 P A A1008 120.485 -96.468 -6.482 1.00 75.64 P
ATOM 25 OP1 A A1008 121.901 -96.056 -6.299 1.00 76.96 O
ATOM 26 OP2 A A1008 119.997 -97.714 -5.807 1.00 61.10 O
ATOM 27 O5' A A1008 119.543 -95.254 -6.038 1.00 62.11 O
TER
ATOM 1 O3' G B1109 108.389-102.000 -5.997 1.00 45.91 O
ATOM 2 P A B1110 107.669-102.898 -7.118 1.00 50.78 P
ATOM 3 OP1 A B1110 106.326-103.204 -6.560 1.00 43.96 O
ATOM 4 OP2 A B1110 108.594-104.004 -7.502 1.00 53.87 O
ATOM 5 O5' A B1110 107.507-101.932 -8.384 1.00 44.49 O
ATOM 6 C5' A B1110 108.568-101.048 -8.729 1.00 52.36 C
ATOM 7 C4' A B1110 108.161-100.061 -9.799 1.00 50.21 C
ATOM 8 O4' A B1110 109.250 -99.108 -9.895 1.00 48.68 O
ATOM 9 C3' A B1110 107.993-100.670 -11.185 1.00 44.39 C
ATOM 10 O3' A B1110 106.608-100.917 -11.435 1.00 39.30 O
ATOM 11 C2' A B1110 108.558 -99.605 -12.127 1.00 47.21 C
ATOM 12 O2' A B1110 107.603 -98.688 -12.624 1.00 44.91 O
ATOM 13 C1' A B1110 109.598 -98.903 -11.245 1.00 46.98 C
ATOM 14 N9 A B1110 110.970 -99.381 -11.411 1.00 46.90 N
ATOM 15 C8 A B1110 111.497-100.558 -10.959 1.00 49.84 C
ATOM 16 N7 A B1110 112.762-100.719 -11.256 1.00 50.69 N
ATOM 17 C5 A B1110 113.089 -99.566 -11.955 1.00 49.89 C
ATOM 18 C6 A B1110 114.285 -99.127 -12.557 1.00 51.48 C
ATOM 19 N6 A B1110 115.417 -99.824 -12.545 1.00 51.95 N
ATOM 20 N1 A B1110 114.273 -97.926 -13.179 1.00 51.81 N
ATOM 21 C2 A B1110 113.138 -97.225 -13.185 1.00 51.56 C
ATOM 22 N3 A B1110 111.952 -97.533 -12.656 1.00 54.20 N
ATOM 23 C4 A B1110 111.995 -98.733 -12.052 1.00 50.36 C
ATOM 24 P A B1111 106.154-102.045 -12.490 1.00 40.83 P
ATOM 25 OP1 A B1111 104.675-102.155 -12.414 1.00 37.33 O
ATOM 26 OP2 A B1111 107.007-103.255 -12.264 1.00 36.95 O
ATOM 27 O5' A B1111 106.516-101.433 -13.914 1.00 41.55 O
TER
ATOM 2 P A A1007 120.312-101.228 -7.239 1.00 52.52 P
ATOM 3 OP1 A A1007 121.698-100.906 -6.825 1.00 56.38 O
ATOM 4 OP2 A A1007 119.353-101.750 -6.228 1.00 55.78 O
ATOM 5 O5' A A1007 119.696 -99.935 -7.944 1.00 52.44 O
ATOM 6 C5' A A1007 120.074 -99.570 -9.274 1.00 48.34 C
ATOM 7 C4' A A1007 119.410 -98.269 -9.669 1.00 45.71 C
ATOM 8 O4' A A1007 118.134 -98.510 -10.313 1.00 46.37 O
ATOM 9 C3' A A1007 119.083 -97.352 -8.511 1.00 50.61 C
ATOM 10 O3' A A1007 120.207 -96.612 -8.065 1.00 57.43 O
ATOM 11 C2' A A1007 117.949 -96.493 -9.057 1.00 55.64 C
ATOM 12 O2' A A1007 118.401 -95.392 -9.828 1.00 51.99 O
ATOM 13 C1' A A1007 117.207 -97.496 -9.946 1.00 53.91 C
ATOM 14 N9 A A1007 116.038 -98.142 -9.320 1.00 55.78 N
ATOM 15 C8 A A1007 116.042 -99.291 -8.564 1.00 54.86 C
ATOM 16 N7 A A1007 114.849 -99.683 -8.181 1.00 52.49 N
ATOM 17 C5 A A1007 113.993 -98.724 -8.711 1.00 55.06 C
ATOM 18 C6 A A1007 112.580 -98.581 -8.681 1.00 51.60 C
ATOM 19 N6 A A1007 111.751 -99.452 -8.098 1.00 49.82 N
ATOM 20 N1 A A1007 112.047 -97.504 -9.292 1.00 49.00 N
ATOM 21 C2 A A1007 112.867 -96.640 -9.900 1.00 50.83 C
ATOM 22 N3 A A1007 114.198 -96.672 -10.016 1.00 54.50 N
ATOM 23 C4 A A1007 114.710 -97.752 -9.394 1.00 56.68 C
ATOM 24 P A A1008 120.485 -96.468 -6.482 1.00 75.64 P
ATOM 25 OP1 A A1008 121.901 -96.056 -6.299 1.00 76.96 O
ATOM 26 OP2 A A1008 119.997 -97.714 -5.807 1.00 61.10 O
ATOM 27 O5' A A1008 119.543 -95.254 -6.038 1.00 62.11 O
TER
ATOM 1 O3' G B1109 108.389-102.000 -5.997 1.00 45.91 O
ATOM 2 P A B1110 107.669-102.898 -7.118 1.00 50.78 P
ATOM 3 OP1 A B1110 106.326-103.204 -6.560 1.00 43.96 O
ATOM 4 OP2 A B1110 108.594-104.004 -7.502 1.00 53.87 O
ATOM 5 O5' A B1110 107.507-101.932 -8.384 1.00 44.49 O
ATOM 6 C5' A B1110 108.568-101.048 -8.729 1.00 52.36 C
ATOM 7 C4' A B1110 108.161-100.061 -9.799 1.00 50.21 C
ATOM 8 O4' A B1110 109.250 -99.108 -9.895 1.00 48.68 O
ATOM 9 C3' A B1110 107.993-100.670 -11.185 1.00 44.39 C
ATOM 10 O3' A B1110 106.608-100.917 -11.435 1.00 39.30 O
ATOM 11 C2' A B1110 108.558 -99.605 -12.127 1.00 47.21 C
ATOM 12 O2' A B1110 107.603 -98.688 -12.624 1.00 44.91 O
ATOM 13 C1' A B1110 109.598 -98.903 -11.245 1.00 46.98 C
ATOM 14 N9 A B1110 110.970 -99.381 -11.411 1.00 46.90 N
ATOM 15 C8 A B1110 111.497-100.558 -10.959 1.00 49.84 C
ATOM 16 N7 A B1110 112.762-100.719 -11.256 1.00 50.69 N
ATOM 17 C5 A B1110 113.089 -99.566 -11.955 1.00 49.89 C
ATOM 18 C6 A B1110 114.285 -99.127 -12.557 1.00 51.48 C
ATOM 19 N6 A B1110 115.417 -99.824 -12.545 1.00 51.95 N
ATOM 20 N1 A B1110 114.273 -97.926 -13.179 1.00 51.81 N
ATOM 21 C2 A B1110 113.138 -97.225 -13.185 1.00 51.56 C
ATOM 22 N3 A B1110 111.952 -97.533 -12.656 1.00 54.20 N
ATOM 23 C4 A B1110 111.995 -98.733 -12.052 1.00 50.36 C
ATOM 24 P A B1111 106.154-102.045 -12.490 1.00 40.83 P
ATOM 25 OP1 A B1111 104.675-102.155 -12.414 1.00 37.33 O
ATOM 26 OP2 A B1111 107.007-103.255 -12.264 1.00 36.95 O
ATOM 27 O5' A B1111 106.516-101.433 -13.914 1.00 41.55 O
TER
Atoms:
OP1: (121.698,-100.906,-6.825)
OP2: (119.353,-101.750,-6.228)
C3': (119.083,-97.352,-8.511)
C1': (117.207,-97.496,-9.946)
C5': (120.074,-99.570,-9.274)
O4': (118.134,-98.510,-10.313)
C8: (116.042,-99.291,-8.564)
O2': (118.401,-95.392,-9.828)
C6: (112.580,-98.581,-8.681)
C5: (113.993,-98.724,-8.711)
C4: (114.710,-97.752,-9.394)
P: (120.312,-101.228,-7.239)
C4': (119.410,-98.269,-9.669)
C2': (117.949,-96.493,-9.057)
C2: (112.867,-96.640,-9.900)
N1: (112.047,-97.504,-9.292)
N3: (114.198,-96.672,-10.016)
N6: (111.751,-99.452,-8.098)
N7: (114.849,-99.683,-8.181)
N9: (116.038,-98.142,-9.320)
O5': (119.696,-99.935,-7.944)
O3': (120.207,-96.612,-8.065)
OP2: (119.353,-101.750,-6.228)
C3': (119.083,-97.352,-8.511)
C1': (117.207,-97.496,-9.946)
C5': (120.074,-99.570,-9.274)
O4': (118.134,-98.510,-10.313)
C8: (116.042,-99.291,-8.564)
O2': (118.401,-95.392,-9.828)
C6: (112.580,-98.581,-8.681)
C5: (113.993,-98.724,-8.711)
C4: (114.710,-97.752,-9.394)
P: (120.312,-101.228,-7.239)
C4': (119.410,-98.269,-9.669)
C2': (117.949,-96.493,-9.057)
C2: (112.867,-96.640,-9.900)
N1: (112.047,-97.504,-9.292)
N3: (114.198,-96.672,-10.016)
N6: (111.751,-99.452,-8.098)
N7: (114.849,-99.683,-8.181)
N9: (116.038,-98.142,-9.320)
O5': (119.696,-99.935,-7.944)
O3': (120.207,-96.612,-8.065)
OP1: (106.326,-103.204,-6.560)
OP2: (108.594,-104.004,-7.502)
C3': (107.993,-100.670,-11.185)
C1': (109.598,-98.903,-11.245)
C5': (108.568,-101.048,-8.729)
O4': (109.250,-99.108,-9.895)
C8: (111.497,-100.558,-10.959)
O2': (107.603,-98.688,-12.624)
C6: (114.285,-99.127,-12.557)
C5: (113.089,-99.566,-11.955)
C4: (111.995,-98.733,-12.052)
P: (107.669,-102.898,-7.118)
C4': (108.161,-100.061,-9.799)
C2': (108.558,-99.605,-12.127)
C2: (113.138,-97.225,-13.185)
N1: (114.273,-97.926,-13.179)
N3: (111.952,-97.533,-12.656)
N6: (115.417,-99.824,-12.545)
N7: (112.762,-100.719,-11.256)
N9: (110.970,-99.381,-11.411)
O5': (107.507,-101.932,-8.384)
O3': (106.608,-100.917,-11.435)
OP2: (108.594,-104.004,-7.502)
C3': (107.993,-100.670,-11.185)
C1': (109.598,-98.903,-11.245)
C5': (108.568,-101.048,-8.729)
O4': (109.250,-99.108,-9.895)
C8: (111.497,-100.558,-10.959)
O2': (107.603,-98.688,-12.624)
C6: (114.285,-99.127,-12.557)
C5: (113.089,-99.566,-11.955)
C4: (111.995,-98.733,-12.052)
P: (107.669,-102.898,-7.118)
C4': (108.161,-100.061,-9.799)
C2': (108.558,-99.605,-12.127)
C2: (113.138,-97.225,-13.185)
N1: (114.273,-97.926,-13.179)
N3: (111.952,-97.533,-12.656)
N6: (115.417,-99.824,-12.545)
N7: (112.762,-100.719,-11.256)
N9: (110.970,-99.381,-11.411)
O5': (107.507,-101.932,-8.384)
O3': (106.608,-100.917,-11.435)
Image (generated by PyMOL):