Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A691:A479
Extra
PDB:
ATOM 1 O3' G A 690 53.883 -47.959 -44.122 1.00 27.19 O
ATOM 2 P C A 691 52.847 -47.384 -43.027 1.00 47.00 P
ATOM 3 OP1 C A 691 51.480 -47.678 -43.517 1.00 42.62 O
ATOM 4 OP2 C A 691 53.218 -45.972 -42.755 1.00 44.42 O
ATOM 5 O5' C A 691 53.145 -48.276 -41.744 1.00 36.29 O
ATOM 6 C5' C A 691 52.475 -49.520 -41.567 1.00 38.01 C
ATOM 7 C4' C A 691 52.591 -50.027 -40.159 1.00 31.26 C
ATOM 8 O4' C A 691 53.977 -50.151 -39.800 1.00 33.36 O
ATOM 9 C3' C A 691 52.019 -49.133 -39.098 1.00 27.15 C
ATOM 10 O3' C A 691 50.635 -49.310 -38.962 1.00 26.37 O
ATOM 11 C2' C A 691 52.812 -49.551 -37.872 1.00 29.85 C
ATOM 12 O2' C A 691 52.400 -50.836 -37.437 1.00 29.76 O
ATOM 13 C1' C A 691 54.169 -49.726 -38.478 1.00 31.45 C
ATOM 14 N1 C A 691 54.960 -48.485 -38.497 1.00 36.23 N
ATOM 15 C2 C A 691 55.585 -48.089 -37.324 1.00 33.62 C
ATOM 16 O2 C A 691 55.325 -48.754 -36.315 1.00 33.52 O
ATOM 17 N3 C A 691 56.388 -47.010 -37.328 1.00 28.95 N
ATOM 18 C4 C A 691 56.578 -46.380 -38.465 1.00 27.06 C
ATOM 19 N4 C A 691 57.344 -45.320 -38.439 1.00 36.14 N
ATOM 20 C5 C A 691 55.987 -46.770 -39.682 1.00 32.91 C
ATOM 21 C6 C A 691 55.187 -47.833 -39.670 1.00 34.58 C
ATOM 22 P G A 692 49.739 -48.174 -38.286 1.00 27.77 P
ATOM 23 OP1 G A 692 48.320 -48.589 -38.435 1.00 27.75 O
ATOM 24 OP2 G A 692 50.174 -46.891 -38.857 1.00 30.15 O
ATOM 25 O5' G A 692 50.159 -48.238 -36.758 1.00 27.52 O
TER
ATOM 1 O3' U B 478 46.439 -54.578 -32.296 1.00 25.01 O
ATOM 2 P G B 479 46.989 -55.690 -33.309 1.00 36.46 P
ATOM 3 OP1 G B 479 45.813 -56.368 -33.908 1.00 39.81 O
ATOM 4 OP2 G B 479 47.967 -56.519 -32.576 1.00 37.31 O
ATOM 5 O5' G B 479 47.728 -54.812 -34.404 1.00 31.03 O
ATOM 6 C5' G B 479 47.035 -53.794 -35.111 1.00 26.69 C
ATOM 7 C4' G B 479 47.960 -53.038 -36.028 1.00 27.28 C
ATOM 8 O4' G B 479 48.795 -52.156 -35.248 1.00 28.06 O
ATOM 9 C3' G B 479 48.922 -53.894 -36.840 1.00 26.51 C
ATOM 10 O3' G B 479 48.376 -54.246 -38.077 1.00 20.01 O
ATOM 11 C2' G B 479 50.132 -53.009 -36.996 1.00 34.69 C
ATOM 12 O2' G B 479 49.916 -52.113 -38.072 1.00 32.48 O
ATOM 13 C1' G B 479 50.120 -52.207 -35.702 1.00 33.63 C
ATOM 14 N9 G B 479 50.951 -52.794 -34.622 1.00 32.06 N
ATOM 15 C8 G B 479 50.567 -53.841 -33.838 1.00 33.91 C
ATOM 16 N7 G B 479 51.423 -54.112 -32.899 1.00 37.10 N
ATOM 17 C5 G B 479 52.432 -53.184 -33.021 1.00 32.59 C
ATOM 18 C6 G B 479 53.624 -53.014 -32.252 1.00 37.92 C
ATOM 19 O6 G B 479 54.093 -53.642 -31.261 1.00 50.23 O
ATOM 20 N1 G B 479 54.347 -51.949 -32.756 1.00 40.81 N
ATOM 21 C2 G B 479 53.990 -51.170 -33.815 1.00 36.38 C
ATOM 22 N2 G B 479 54.846 -50.192 -34.112 1.00 37.04 N
ATOM 23 N3 G B 479 52.890 -51.324 -34.516 1.00 37.43 N
ATOM 24 C4 G B 479 52.149 -52.350 -34.075 1.00 34.02 C
ATOM 25 P A B 480 48.830 -55.580 -38.834 1.00 27.72 P
ATOM 26 OP1 A B 480 47.822 -55.806 -39.929 1.00 37.09 O
ATOM 27 OP2 A B 480 49.029 -56.640 -37.806 1.00 28.87 O
ATOM 28 O5' A B 480 50.228 -55.178 -39.466 1.00 35.15 O
TER
ATOM 2 P C A 691 52.847 -47.384 -43.027 1.00 47.00 P
ATOM 3 OP1 C A 691 51.480 -47.678 -43.517 1.00 42.62 O
ATOM 4 OP2 C A 691 53.218 -45.972 -42.755 1.00 44.42 O
ATOM 5 O5' C A 691 53.145 -48.276 -41.744 1.00 36.29 O
ATOM 6 C5' C A 691 52.475 -49.520 -41.567 1.00 38.01 C
ATOM 7 C4' C A 691 52.591 -50.027 -40.159 1.00 31.26 C
ATOM 8 O4' C A 691 53.977 -50.151 -39.800 1.00 33.36 O
ATOM 9 C3' C A 691 52.019 -49.133 -39.098 1.00 27.15 C
ATOM 10 O3' C A 691 50.635 -49.310 -38.962 1.00 26.37 O
ATOM 11 C2' C A 691 52.812 -49.551 -37.872 1.00 29.85 C
ATOM 12 O2' C A 691 52.400 -50.836 -37.437 1.00 29.76 O
ATOM 13 C1' C A 691 54.169 -49.726 -38.478 1.00 31.45 C
ATOM 14 N1 C A 691 54.960 -48.485 -38.497 1.00 36.23 N
ATOM 15 C2 C A 691 55.585 -48.089 -37.324 1.00 33.62 C
ATOM 16 O2 C A 691 55.325 -48.754 -36.315 1.00 33.52 O
ATOM 17 N3 C A 691 56.388 -47.010 -37.328 1.00 28.95 N
ATOM 18 C4 C A 691 56.578 -46.380 -38.465 1.00 27.06 C
ATOM 19 N4 C A 691 57.344 -45.320 -38.439 1.00 36.14 N
ATOM 20 C5 C A 691 55.987 -46.770 -39.682 1.00 32.91 C
ATOM 21 C6 C A 691 55.187 -47.833 -39.670 1.00 34.58 C
ATOM 22 P G A 692 49.739 -48.174 -38.286 1.00 27.77 P
ATOM 23 OP1 G A 692 48.320 -48.589 -38.435 1.00 27.75 O
ATOM 24 OP2 G A 692 50.174 -46.891 -38.857 1.00 30.15 O
ATOM 25 O5' G A 692 50.159 -48.238 -36.758 1.00 27.52 O
TER
ATOM 1 O3' U B 478 46.439 -54.578 -32.296 1.00 25.01 O
ATOM 2 P G B 479 46.989 -55.690 -33.309 1.00 36.46 P
ATOM 3 OP1 G B 479 45.813 -56.368 -33.908 1.00 39.81 O
ATOM 4 OP2 G B 479 47.967 -56.519 -32.576 1.00 37.31 O
ATOM 5 O5' G B 479 47.728 -54.812 -34.404 1.00 31.03 O
ATOM 6 C5' G B 479 47.035 -53.794 -35.111 1.00 26.69 C
ATOM 7 C4' G B 479 47.960 -53.038 -36.028 1.00 27.28 C
ATOM 8 O4' G B 479 48.795 -52.156 -35.248 1.00 28.06 O
ATOM 9 C3' G B 479 48.922 -53.894 -36.840 1.00 26.51 C
ATOM 10 O3' G B 479 48.376 -54.246 -38.077 1.00 20.01 O
ATOM 11 C2' G B 479 50.132 -53.009 -36.996 1.00 34.69 C
ATOM 12 O2' G B 479 49.916 -52.113 -38.072 1.00 32.48 O
ATOM 13 C1' G B 479 50.120 -52.207 -35.702 1.00 33.63 C
ATOM 14 N9 G B 479 50.951 -52.794 -34.622 1.00 32.06 N
ATOM 15 C8 G B 479 50.567 -53.841 -33.838 1.00 33.91 C
ATOM 16 N7 G B 479 51.423 -54.112 -32.899 1.00 37.10 N
ATOM 17 C5 G B 479 52.432 -53.184 -33.021 1.00 32.59 C
ATOM 18 C6 G B 479 53.624 -53.014 -32.252 1.00 37.92 C
ATOM 19 O6 G B 479 54.093 -53.642 -31.261 1.00 50.23 O
ATOM 20 N1 G B 479 54.347 -51.949 -32.756 1.00 40.81 N
ATOM 21 C2 G B 479 53.990 -51.170 -33.815 1.00 36.38 C
ATOM 22 N2 G B 479 54.846 -50.192 -34.112 1.00 37.04 N
ATOM 23 N3 G B 479 52.890 -51.324 -34.516 1.00 37.43 N
ATOM 24 C4 G B 479 52.149 -52.350 -34.075 1.00 34.02 C
ATOM 25 P A B 480 48.830 -55.580 -38.834 1.00 27.72 P
ATOM 26 OP1 A B 480 47.822 -55.806 -39.929 1.00 37.09 O
ATOM 27 OP2 A B 480 49.029 -56.640 -37.806 1.00 28.87 O
ATOM 28 O5' A B 480 50.228 -55.178 -39.466 1.00 35.15 O
TER
Atoms:
C2: (55.585,-48.089,-37.324)
OP1: (51.480,-47.678,-43.517)
OP2: (53.218,-45.972,-42.755)
C4: (56.578,-46.380,-38.465)
O5': (53.145,-48.276,-41.744)
C3': (52.019,-49.133,-39.098)
C1': (54.169,-49.726,-38.478)
O4': (53.977,-50.151,-39.800)
C5': (52.475,-49.520,-41.567)
P: (52.847,-47.384,-43.027)
O2: (55.325,-48.754,-36.315)
C4': (52.591,-50.027,-40.159)
C2': (52.812,-49.551,-37.872)
O2': (52.400,-50.836,-37.437)
N1: (54.960,-48.485,-38.497)
N3: (56.388,-47.010,-37.328)
N4: (57.344,-45.320,-38.439)
C6: (55.187,-47.833,-39.670)
C5: (55.987,-46.770,-39.682)
O3': (50.635,-49.310,-38.962)
OP1: (51.480,-47.678,-43.517)
OP2: (53.218,-45.972,-42.755)
C4: (56.578,-46.380,-38.465)
O5': (53.145,-48.276,-41.744)
C3': (52.019,-49.133,-39.098)
C1': (54.169,-49.726,-38.478)
O4': (53.977,-50.151,-39.800)
C5': (52.475,-49.520,-41.567)
P: (52.847,-47.384,-43.027)
O2: (55.325,-48.754,-36.315)
C4': (52.591,-50.027,-40.159)
C2': (52.812,-49.551,-37.872)
O2': (52.400,-50.836,-37.437)
N1: (54.960,-48.485,-38.497)
N3: (56.388,-47.010,-37.328)
N4: (57.344,-45.320,-38.439)
C6: (55.187,-47.833,-39.670)
C5: (55.987,-46.770,-39.682)
O3': (50.635,-49.310,-38.962)
OP1: (45.813,-56.368,-33.908)
OP2: (47.967,-56.519,-32.576)
C3': (48.922,-53.894,-36.840)
C1': (50.120,-52.207,-35.702)
C5': (47.035,-53.794,-35.111)
O6: (54.093,-53.642,-31.261)
O4': (48.795,-52.156,-35.248)
C8: (50.567,-53.841,-33.838)
C2: (53.990,-51.170,-33.815)
C6: (53.624,-53.014,-32.252)
C5: (52.432,-53.184,-33.021)
C4: (52.149,-52.350,-34.075)
P: (46.989,-55.690,-33.309)
C4': (47.960,-53.038,-36.028)
C2': (50.132,-53.009,-36.996)
O2': (49.916,-52.113,-38.072)
N1: (54.347,-51.949,-32.756)
N2: (54.846,-50.192,-34.112)
N3: (52.890,-51.324,-34.516)
N7: (51.423,-54.112,-32.899)
N9: (50.951,-52.794,-34.622)
O5': (47.728,-54.812,-34.404)
O3': (48.376,-54.246,-38.077)
OP2: (47.967,-56.519,-32.576)
C3': (48.922,-53.894,-36.840)
C1': (50.120,-52.207,-35.702)
C5': (47.035,-53.794,-35.111)
O6: (54.093,-53.642,-31.261)
O4': (48.795,-52.156,-35.248)
C8: (50.567,-53.841,-33.838)
C2: (53.990,-51.170,-33.815)
C6: (53.624,-53.014,-32.252)
C5: (52.432,-53.184,-33.021)
C4: (52.149,-52.350,-34.075)
P: (46.989,-55.690,-33.309)
C4': (47.960,-53.038,-36.028)
C2': (50.132,-53.009,-36.996)
O2': (49.916,-52.113,-38.072)
N1: (54.347,-51.949,-32.756)
N2: (54.846,-50.192,-34.112)
N3: (52.890,-51.324,-34.516)
N7: (51.423,-54.112,-32.899)
N9: (50.951,-52.794,-34.622)
O5': (47.728,-54.812,-34.404)
O3': (48.376,-54.246,-38.077)
Image (generated by PyMOL):