Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:A30:A9
Extra
PDB:
ATOM 1 O3' C A 29 3.178 -49.563 24.286 1.00 80.36 O
ATOM 2 P C A 30 1.744 -49.342 23.613 1.00 79.30 P
ATOM 3 OP1 C A 30 0.921 -48.559 24.562 1.00 79.02 O
ATOM 4 OP2 C A 30 1.247 -50.644 23.106 1.00 80.47 O
ATOM 5 O5' C A 30 2.089 -48.431 22.347 1.00 77.30 O
ATOM 6 C5' C A 30 2.650 -47.141 22.550 1.00 75.10 C
ATOM 7 C4' C A 30 2.890 -46.457 21.225 1.00 73.06 C
ATOM 8 O4' C A 30 3.848 -47.218 20.459 1.00 72.98 O
ATOM 9 C3' C A 30 1.666 -46.381 20.333 1.00 72.22 C
ATOM 10 O3' C A 30 0.897 -45.246 20.674 1.00 71.22 O
ATOM 11 C2' C A 30 2.285 -46.265 18.946 1.00 71.94 C
ATOM 12 O2' C A 30 2.648 -44.942 18.610 1.00 71.31 O
ATOM 13 C1' C A 30 3.544 -47.112 19.079 1.00 72.09 C
ATOM 14 N1 C A 30 3.465 -48.482 18.459 1.00 72.09 N
ATOM 15 C2 C A 30 3.472 -48.625 17.060 1.00 71.98 C
ATOM 16 O2 C A 30 3.530 -47.623 16.336 1.00 71.41 O
ATOM 17 N3 C A 30 3.416 -49.875 16.529 1.00 72.75 N
ATOM 18 C4 C A 30 3.362 -50.943 17.329 1.00 73.46 C
ATOM 19 N4 C A 30 3.305 -52.146 16.756 1.00 74.47 N
ATOM 20 C5 C A 30 3.352 -50.823 18.750 1.00 73.44 C
ATOM 21 C6 C A 30 3.408 -49.588 19.262 1.00 72.71 C
ATOM 22 P G A 31 -0.688 -45.271 20.473 1.00 71.26 P
ATOM 23 OP1 G A 31 -1.236 -44.045 21.095 1.00 70.54 O
ATOM 24 OP2 G A 31 -1.194 -46.604 20.882 1.00 72.09 O
ATOM 25 O5' G A 31 -0.860 -45.179 18.888 1.00 70.79 O
TER
ATOM 1 O3' A B 8 4.902 -36.341 19.938 1.00 66.64 O
ATOM 2 P G B 9 6.116 -37.255 20.442 1.00 66.85 P
ATOM 3 OP1 G B 9 6.471 -36.828 21.817 1.00 66.94 O
ATOM 4 OP2 G B 9 7.162 -37.293 19.394 1.00 66.39 O
ATOM 5 O5' G B 9 5.440 -38.702 20.496 1.00 67.06 O
ATOM 6 C5' G B 9 4.387 -38.968 21.415 1.00 67.24 C
ATOM 7 C4' G B 9 3.789 -40.334 21.157 1.00 67.68 C
ATOM 8 O4' G B 9 3.268 -40.373 19.808 1.00 67.63 O
ATOM 9 C3' G B 9 4.784 -41.483 21.219 1.00 68.54 C
ATOM 10 O3' G B 9 4.951 -41.934 22.558 1.00 69.36 O
ATOM 11 C2' G B 9 4.117 -42.523 20.326 1.00 68.87 C
ATOM 12 O2' G B 9 3.096 -43.235 20.998 1.00 69.39 O
ATOM 13 C1' G B 9 3.509 -41.645 19.235 1.00 68.27 C
ATOM 14 N9 G B 9 4.348 -41.484 18.045 1.00 68.26 N
ATOM 15 C8 G B 9 5.331 -40.544 17.839 1.00 68.07 C
ATOM 16 N7 G B 9 5.911 -40.633 16.675 1.00 68.02 N
ATOM 17 C5 G B 9 5.273 -41.700 16.065 1.00 68.41 C
ATOM 18 C6 G B 9 5.477 -42.267 14.785 1.00 68.90 C
ATOM 19 O6 G B 9 6.301 -41.911 13.931 1.00 69.21 O
ATOM 20 N1 G B 9 4.624 -43.347 14.540 1.00 69.32 N
ATOM 21 C2 G B 9 3.684 -43.813 15.434 1.00 69.29 C
ATOM 22 N2 G B 9 2.942 -44.859 15.046 1.00 69.89 N
ATOM 23 N3 G B 9 3.483 -43.287 16.636 1.00 69.13 N
ATOM 24 C4 G B 9 4.310 -42.239 16.892 1.00 68.68 C
ATOM 25 P A B 10 6.294 -41.593 23.365 1.00 69.91 P
ATOM 26 OP1 A B 10 5.905 -40.784 24.540 1.00 70.16 O
ATOM 27 OP2 A B 10 7.310 -41.085 22.417 1.00 69.72 O
ATOM 28 O5' A B 10 6.807 -43.009 23.886 1.00 71.14 O
TER
ATOM 2 P C A 30 1.744 -49.342 23.613 1.00 79.30 P
ATOM 3 OP1 C A 30 0.921 -48.559 24.562 1.00 79.02 O
ATOM 4 OP2 C A 30 1.247 -50.644 23.106 1.00 80.47 O
ATOM 5 O5' C A 30 2.089 -48.431 22.347 1.00 77.30 O
ATOM 6 C5' C A 30 2.650 -47.141 22.550 1.00 75.10 C
ATOM 7 C4' C A 30 2.890 -46.457 21.225 1.00 73.06 C
ATOM 8 O4' C A 30 3.848 -47.218 20.459 1.00 72.98 O
ATOM 9 C3' C A 30 1.666 -46.381 20.333 1.00 72.22 C
ATOM 10 O3' C A 30 0.897 -45.246 20.674 1.00 71.22 O
ATOM 11 C2' C A 30 2.285 -46.265 18.946 1.00 71.94 C
ATOM 12 O2' C A 30 2.648 -44.942 18.610 1.00 71.31 O
ATOM 13 C1' C A 30 3.544 -47.112 19.079 1.00 72.09 C
ATOM 14 N1 C A 30 3.465 -48.482 18.459 1.00 72.09 N
ATOM 15 C2 C A 30 3.472 -48.625 17.060 1.00 71.98 C
ATOM 16 O2 C A 30 3.530 -47.623 16.336 1.00 71.41 O
ATOM 17 N3 C A 30 3.416 -49.875 16.529 1.00 72.75 N
ATOM 18 C4 C A 30 3.362 -50.943 17.329 1.00 73.46 C
ATOM 19 N4 C A 30 3.305 -52.146 16.756 1.00 74.47 N
ATOM 20 C5 C A 30 3.352 -50.823 18.750 1.00 73.44 C
ATOM 21 C6 C A 30 3.408 -49.588 19.262 1.00 72.71 C
ATOM 22 P G A 31 -0.688 -45.271 20.473 1.00 71.26 P
ATOM 23 OP1 G A 31 -1.236 -44.045 21.095 1.00 70.54 O
ATOM 24 OP2 G A 31 -1.194 -46.604 20.882 1.00 72.09 O
ATOM 25 O5' G A 31 -0.860 -45.179 18.888 1.00 70.79 O
TER
ATOM 1 O3' A B 8 4.902 -36.341 19.938 1.00 66.64 O
ATOM 2 P G B 9 6.116 -37.255 20.442 1.00 66.85 P
ATOM 3 OP1 G B 9 6.471 -36.828 21.817 1.00 66.94 O
ATOM 4 OP2 G B 9 7.162 -37.293 19.394 1.00 66.39 O
ATOM 5 O5' G B 9 5.440 -38.702 20.496 1.00 67.06 O
ATOM 6 C5' G B 9 4.387 -38.968 21.415 1.00 67.24 C
ATOM 7 C4' G B 9 3.789 -40.334 21.157 1.00 67.68 C
ATOM 8 O4' G B 9 3.268 -40.373 19.808 1.00 67.63 O
ATOM 9 C3' G B 9 4.784 -41.483 21.219 1.00 68.54 C
ATOM 10 O3' G B 9 4.951 -41.934 22.558 1.00 69.36 O
ATOM 11 C2' G B 9 4.117 -42.523 20.326 1.00 68.87 C
ATOM 12 O2' G B 9 3.096 -43.235 20.998 1.00 69.39 O
ATOM 13 C1' G B 9 3.509 -41.645 19.235 1.00 68.27 C
ATOM 14 N9 G B 9 4.348 -41.484 18.045 1.00 68.26 N
ATOM 15 C8 G B 9 5.331 -40.544 17.839 1.00 68.07 C
ATOM 16 N7 G B 9 5.911 -40.633 16.675 1.00 68.02 N
ATOM 17 C5 G B 9 5.273 -41.700 16.065 1.00 68.41 C
ATOM 18 C6 G B 9 5.477 -42.267 14.785 1.00 68.90 C
ATOM 19 O6 G B 9 6.301 -41.911 13.931 1.00 69.21 O
ATOM 20 N1 G B 9 4.624 -43.347 14.540 1.00 69.32 N
ATOM 21 C2 G B 9 3.684 -43.813 15.434 1.00 69.29 C
ATOM 22 N2 G B 9 2.942 -44.859 15.046 1.00 69.89 N
ATOM 23 N3 G B 9 3.483 -43.287 16.636 1.00 69.13 N
ATOM 24 C4 G B 9 4.310 -42.239 16.892 1.00 68.68 C
ATOM 25 P A B 10 6.294 -41.593 23.365 1.00 69.91 P
ATOM 26 OP1 A B 10 5.905 -40.784 24.540 1.00 70.16 O
ATOM 27 OP2 A B 10 7.310 -41.085 22.417 1.00 69.72 O
ATOM 28 O5' A B 10 6.807 -43.009 23.886 1.00 71.14 O
TER
Atoms:
C2: (3.472,-48.625,17.060)
OP1: (0.921,-48.559,24.562)
OP2: (1.247,-50.644,23.106)
C4: (3.362,-50.943,17.329)
O5': (2.089,-48.431,22.347)
C3': (1.666,-46.381,20.333)
C1': (3.544,-47.112,19.079)
O4': (3.848,-47.218,20.459)
C5': (2.650,-47.141,22.550)
P: (1.744,-49.342,23.613)
O2: (3.530,-47.623,16.336)
C4': (2.890,-46.457,21.225)
C2': (2.285,-46.265,18.946)
O2': (2.648,-44.942,18.610)
N1: (3.465,-48.482,18.459)
N3: (3.416,-49.875,16.529)
N4: (3.305,-52.146,16.756)
C6: (3.408,-49.588,19.262)
C5: (3.352,-50.823,18.750)
O3': (0.897,-45.246,20.674)
OP1: (0.921,-48.559,24.562)
OP2: (1.247,-50.644,23.106)
C4: (3.362,-50.943,17.329)
O5': (2.089,-48.431,22.347)
C3': (1.666,-46.381,20.333)
C1': (3.544,-47.112,19.079)
O4': (3.848,-47.218,20.459)
C5': (2.650,-47.141,22.550)
P: (1.744,-49.342,23.613)
O2: (3.530,-47.623,16.336)
C4': (2.890,-46.457,21.225)
C2': (2.285,-46.265,18.946)
O2': (2.648,-44.942,18.610)
N1: (3.465,-48.482,18.459)
N3: (3.416,-49.875,16.529)
N4: (3.305,-52.146,16.756)
C6: (3.408,-49.588,19.262)
C5: (3.352,-50.823,18.750)
O3': (0.897,-45.246,20.674)
OP1: (6.471,-36.828,21.817)
OP2: (7.162,-37.293,19.394)
C3': (4.784,-41.483,21.219)
C1': (3.509,-41.645,19.235)
C5': (4.387,-38.968,21.415)
O6: (6.301,-41.911,13.931)
O4': (3.268,-40.373,19.808)
C8: (5.331,-40.544,17.839)
C2: (3.684,-43.813,15.434)
C6: (5.477,-42.267,14.785)
C5: (5.273,-41.700,16.065)
C4: (4.310,-42.239,16.892)
P: (6.116,-37.255,20.442)
C4': (3.789,-40.334,21.157)
C2': (4.117,-42.523,20.326)
O2': (3.096,-43.235,20.998)
N1: (4.624,-43.347,14.540)
N2: (2.942,-44.859,15.046)
N3: (3.483,-43.287,16.636)
N7: (5.911,-40.633,16.675)
N9: (4.348,-41.484,18.045)
O5': (5.440,-38.702,20.496)
O3': (4.951,-41.934,22.558)
OP2: (7.162,-37.293,19.394)
C3': (4.784,-41.483,21.219)
C1': (3.509,-41.645,19.235)
C5': (4.387,-38.968,21.415)
O6: (6.301,-41.911,13.931)
O4': (3.268,-40.373,19.808)
C8: (5.331,-40.544,17.839)
C2: (3.684,-43.813,15.434)
C6: (5.477,-42.267,14.785)
C5: (5.273,-41.700,16.065)
C4: (4.310,-42.239,16.892)
P: (6.116,-37.255,20.442)
C4': (3.789,-40.334,21.157)
C2': (4.117,-42.523,20.326)
O2': (3.096,-43.235,20.998)
N1: (4.624,-43.347,14.540)
N2: (2.942,-44.859,15.046)
N3: (3.483,-43.287,16.636)
N7: (5.911,-40.633,16.675)
N9: (4.348,-41.484,18.045)
O5': (5.440,-38.702,20.496)
O3': (4.951,-41.934,22.558)
Image (generated by PyMOL):