Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXM:B30:B9
Extra
PDB:
ATOM 1 O3' C A 29 2.211 -36.474 32.103 1.00 49.37 O
ATOM 2 P C A 30 2.291 -35.721 30.697 1.00 49.40 P
ATOM 3 OP1 C A 30 3.098 -36.569 29.788 1.00 48.81 O
ATOM 4 OP2 C A 30 2.672 -34.308 30.940 1.00 49.22 O
ATOM 5 O5' C A 30 0.763 -35.743 30.218 1.00 49.19 O
ATOM 6 C5' C A 30 0.110 -36.982 29.942 1.00 48.42 C
ATOM 7 C4' C A 30 -1.332 -36.763 29.516 1.00 48.19 C
ATOM 8 O4' C A 30 -2.131 -36.263 30.618 1.00 48.09 O
ATOM 9 C3' C A 30 -1.538 -35.744 28.407 1.00 47.69 C
ATOM 10 O3' C A 30 -1.301 -36.367 27.157 1.00 46.81 O
ATOM 11 C2' C A 30 -3.002 -35.371 28.608 1.00 47.82 C
ATOM 12 O2' C A 30 -3.898 -36.326 28.077 1.00 47.28 O
ATOM 13 C1' C A 30 -3.118 -35.375 30.126 1.00 47.91 C
ATOM 14 N1 C A 30 -2.964 -34.039 30.790 1.00 48.11 N
ATOM 15 C2 C A 30 -4.008 -33.099 30.743 1.00 48.50 C
ATOM 16 O2 C A 30 -5.056 -33.363 30.145 1.00 48.82 O
ATOM 17 N3 C A 30 -3.850 -31.908 31.374 1.00 48.94 N
ATOM 18 C4 C A 30 -2.716 -31.639 32.026 1.00 49.13 C
ATOM 19 N4 C A 30 -2.604 -30.447 32.619 1.00 49.61 N
ATOM 20 C5 C A 30 -1.640 -32.576 32.082 1.00 48.93 C
ATOM 21 C6 C A 30 -1.809 -33.749 31.462 1.00 48.23 C
ATOM 22 P G A 31 -0.855 -35.510 25.888 1.00 46.68 P
ATOM 23 OP1 G A 31 -0.504 -36.465 24.811 1.00 46.40 O
ATOM 24 OP2 G A 31 0.114 -34.473 26.315 1.00 46.52 O
ATOM 25 O5' G A 31 -2.199 -34.746 25.496 1.00 47.13 O
TER
ATOM 1 O3' A B 8 -7.865 -43.459 24.643 1.00 46.13 O
ATOM 2 P G B 9 -7.526 -43.748 26.178 1.00 46.36 P
ATOM 3 OP1 G B 9 -6.805 -45.040 26.257 1.00 46.10 O
ATOM 4 OP2 G B 9 -8.766 -43.549 26.964 1.00 46.46 O
ATOM 5 O5' G B 9 -6.512 -42.563 26.528 1.00 46.02 O
ATOM 6 C5' G B 9 -5.197 -42.546 25.984 1.00 45.97 C
ATOM 7 C4' G B 9 -4.497 -41.251 26.344 1.00 46.10 C
ATOM 8 O4' G B 9 -5.268 -40.137 25.832 1.00 46.97 O
ATOM 9 C3' G B 9 -4.379 -40.987 27.834 1.00 45.99 C
ATOM 10 O3' G B 9 -3.179 -41.560 28.311 1.00 46.18 O
ATOM 11 C2' G B 9 -4.353 -39.466 27.901 1.00 46.09 C
ATOM 12 O2' G B 9 -3.070 -38.940 27.639 1.00 45.49 O
ATOM 13 C1' G B 9 -5.281 -39.069 26.762 1.00 46.61 C
ATOM 14 N9 G B 9 -6.671 -38.798 27.132 1.00 47.37 N
ATOM 15 C8 G B 9 -7.682 -39.720 27.301 1.00 47.67 C
ATOM 16 N7 G B 9 -8.830 -39.192 27.617 1.00 47.84 N
ATOM 17 C5 G B 9 -8.569 -37.828 27.653 1.00 48.02 C
ATOM 18 C6 G B 9 -9.435 -36.746 27.946 1.00 48.36 C
ATOM 19 O6 G B 9 -10.638 -36.798 28.236 1.00 48.99 O
ATOM 20 N1 G B 9 -8.784 -35.512 27.881 1.00 48.59 N
ATOM 21 C2 G B 9 -7.448 -35.345 27.570 1.00 48.63 C
ATOM 22 N2 G B 9 -6.986 -34.083 27.549 1.00 48.40 N
ATOM 23 N3 G B 9 -6.625 -36.357 27.298 1.00 48.19 N
ATOM 24 C4 G B 9 -7.247 -37.566 27.358 1.00 47.83 C
ATOM 25 P A B 10 -3.191 -42.844 29.273 1.00 46.45 P
ATOM 26 OP1 A B 10 -2.060 -43.695 28.840 1.00 46.59 O
ATOM 27 OP2 A B 10 -4.557 -43.412 29.366 1.00 46.42 O
ATOM 28 O5' A B 10 -2.835 -42.229 30.699 1.00 46.28 O
TER
ATOM 2 P C A 30 2.291 -35.721 30.697 1.00 49.40 P
ATOM 3 OP1 C A 30 3.098 -36.569 29.788 1.00 48.81 O
ATOM 4 OP2 C A 30 2.672 -34.308 30.940 1.00 49.22 O
ATOM 5 O5' C A 30 0.763 -35.743 30.218 1.00 49.19 O
ATOM 6 C5' C A 30 0.110 -36.982 29.942 1.00 48.42 C
ATOM 7 C4' C A 30 -1.332 -36.763 29.516 1.00 48.19 C
ATOM 8 O4' C A 30 -2.131 -36.263 30.618 1.00 48.09 O
ATOM 9 C3' C A 30 -1.538 -35.744 28.407 1.00 47.69 C
ATOM 10 O3' C A 30 -1.301 -36.367 27.157 1.00 46.81 O
ATOM 11 C2' C A 30 -3.002 -35.371 28.608 1.00 47.82 C
ATOM 12 O2' C A 30 -3.898 -36.326 28.077 1.00 47.28 O
ATOM 13 C1' C A 30 -3.118 -35.375 30.126 1.00 47.91 C
ATOM 14 N1 C A 30 -2.964 -34.039 30.790 1.00 48.11 N
ATOM 15 C2 C A 30 -4.008 -33.099 30.743 1.00 48.50 C
ATOM 16 O2 C A 30 -5.056 -33.363 30.145 1.00 48.82 O
ATOM 17 N3 C A 30 -3.850 -31.908 31.374 1.00 48.94 N
ATOM 18 C4 C A 30 -2.716 -31.639 32.026 1.00 49.13 C
ATOM 19 N4 C A 30 -2.604 -30.447 32.619 1.00 49.61 N
ATOM 20 C5 C A 30 -1.640 -32.576 32.082 1.00 48.93 C
ATOM 21 C6 C A 30 -1.809 -33.749 31.462 1.00 48.23 C
ATOM 22 P G A 31 -0.855 -35.510 25.888 1.00 46.68 P
ATOM 23 OP1 G A 31 -0.504 -36.465 24.811 1.00 46.40 O
ATOM 24 OP2 G A 31 0.114 -34.473 26.315 1.00 46.52 O
ATOM 25 O5' G A 31 -2.199 -34.746 25.496 1.00 47.13 O
TER
ATOM 1 O3' A B 8 -7.865 -43.459 24.643 1.00 46.13 O
ATOM 2 P G B 9 -7.526 -43.748 26.178 1.00 46.36 P
ATOM 3 OP1 G B 9 -6.805 -45.040 26.257 1.00 46.10 O
ATOM 4 OP2 G B 9 -8.766 -43.549 26.964 1.00 46.46 O
ATOM 5 O5' G B 9 -6.512 -42.563 26.528 1.00 46.02 O
ATOM 6 C5' G B 9 -5.197 -42.546 25.984 1.00 45.97 C
ATOM 7 C4' G B 9 -4.497 -41.251 26.344 1.00 46.10 C
ATOM 8 O4' G B 9 -5.268 -40.137 25.832 1.00 46.97 O
ATOM 9 C3' G B 9 -4.379 -40.987 27.834 1.00 45.99 C
ATOM 10 O3' G B 9 -3.179 -41.560 28.311 1.00 46.18 O
ATOM 11 C2' G B 9 -4.353 -39.466 27.901 1.00 46.09 C
ATOM 12 O2' G B 9 -3.070 -38.940 27.639 1.00 45.49 O
ATOM 13 C1' G B 9 -5.281 -39.069 26.762 1.00 46.61 C
ATOM 14 N9 G B 9 -6.671 -38.798 27.132 1.00 47.37 N
ATOM 15 C8 G B 9 -7.682 -39.720 27.301 1.00 47.67 C
ATOM 16 N7 G B 9 -8.830 -39.192 27.617 1.00 47.84 N
ATOM 17 C5 G B 9 -8.569 -37.828 27.653 1.00 48.02 C
ATOM 18 C6 G B 9 -9.435 -36.746 27.946 1.00 48.36 C
ATOM 19 O6 G B 9 -10.638 -36.798 28.236 1.00 48.99 O
ATOM 20 N1 G B 9 -8.784 -35.512 27.881 1.00 48.59 N
ATOM 21 C2 G B 9 -7.448 -35.345 27.570 1.00 48.63 C
ATOM 22 N2 G B 9 -6.986 -34.083 27.549 1.00 48.40 N
ATOM 23 N3 G B 9 -6.625 -36.357 27.298 1.00 48.19 N
ATOM 24 C4 G B 9 -7.247 -37.566 27.358 1.00 47.83 C
ATOM 25 P A B 10 -3.191 -42.844 29.273 1.00 46.45 P
ATOM 26 OP1 A B 10 -2.060 -43.695 28.840 1.00 46.59 O
ATOM 27 OP2 A B 10 -4.557 -43.412 29.366 1.00 46.42 O
ATOM 28 O5' A B 10 -2.835 -42.229 30.699 1.00 46.28 O
TER
Atoms:
C2: (-4.008,-33.099,30.743)
OP1: (3.098,-36.569,29.788)
OP2: (2.672,-34.308,30.940)
C4: (-2.716,-31.639,32.026)
O5': (0.763,-35.743,30.218)
C3': (-1.538,-35.744,28.407)
C1': (-3.118,-35.375,30.126)
O4': (-2.131,-36.263,30.618)
C5': (0.110,-36.982,29.942)
P: (2.291,-35.721,30.697)
O2: (-5.056,-33.363,30.145)
C4': (-1.332,-36.763,29.516)
C2': (-3.002,-35.371,28.608)
O2': (-3.898,-36.326,28.077)
N1: (-2.964,-34.039,30.790)
N3: (-3.850,-31.908,31.374)
N4: (-2.604,-30.447,32.619)
C6: (-1.809,-33.749,31.462)
C5: (-1.640,-32.576,32.082)
O3': (-1.301,-36.367,27.157)
OP1: (3.098,-36.569,29.788)
OP2: (2.672,-34.308,30.940)
C4: (-2.716,-31.639,32.026)
O5': (0.763,-35.743,30.218)
C3': (-1.538,-35.744,28.407)
C1': (-3.118,-35.375,30.126)
O4': (-2.131,-36.263,30.618)
C5': (0.110,-36.982,29.942)
P: (2.291,-35.721,30.697)
O2: (-5.056,-33.363,30.145)
C4': (-1.332,-36.763,29.516)
C2': (-3.002,-35.371,28.608)
O2': (-3.898,-36.326,28.077)
N1: (-2.964,-34.039,30.790)
N3: (-3.850,-31.908,31.374)
N4: (-2.604,-30.447,32.619)
C6: (-1.809,-33.749,31.462)
C5: (-1.640,-32.576,32.082)
O3': (-1.301,-36.367,27.157)
OP1: (-6.805,-45.040,26.257)
OP2: (-8.766,-43.549,26.964)
C3': (-4.379,-40.987,27.834)
C1': (-5.281,-39.069,26.762)
C5': (-5.197,-42.546,25.984)
O6: (-10.638,-36.798,28.236)
O4': (-5.268,-40.137,25.832)
C8: (-7.682,-39.720,27.301)
C2: (-7.448,-35.345,27.570)
C6: (-9.435,-36.746,27.946)
C5: (-8.569,-37.828,27.653)
C4: (-7.247,-37.566,27.358)
P: (-7.526,-43.748,26.178)
C4': (-4.497,-41.251,26.344)
C2': (-4.353,-39.466,27.901)
O2': (-3.070,-38.940,27.639)
N1: (-8.784,-35.512,27.881)
N2: (-6.986,-34.083,27.549)
N3: (-6.625,-36.357,27.298)
N7: (-8.830,-39.192,27.617)
N9: (-6.671,-38.798,27.132)
O5': (-6.512,-42.563,26.528)
O3': (-3.179,-41.560,28.311)
OP2: (-8.766,-43.549,26.964)
C3': (-4.379,-40.987,27.834)
C1': (-5.281,-39.069,26.762)
C5': (-5.197,-42.546,25.984)
O6: (-10.638,-36.798,28.236)
O4': (-5.268,-40.137,25.832)
C8: (-7.682,-39.720,27.301)
C2: (-7.448,-35.345,27.570)
C6: (-9.435,-36.746,27.946)
C5: (-8.569,-37.828,27.653)
C4: (-7.247,-37.566,27.358)
P: (-7.526,-43.748,26.178)
C4': (-4.497,-41.251,26.344)
C2': (-4.353,-39.466,27.901)
O2': (-3.070,-38.940,27.639)
N1: (-8.784,-35.512,27.881)
N2: (-6.986,-34.083,27.549)
N3: (-6.625,-36.357,27.298)
N7: (-8.830,-39.192,27.617)
N9: (-6.671,-38.798,27.132)
O5': (-6.512,-42.563,26.528)
O3': (-3.179,-41.560,28.311)
Image (generated by PyMOL):