Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:V40:A1336
Extra
PDB:
ATOM 1 O3' C A 39 -68.609 128.857 82.914 1.00 36.36 O
ATOM 2 P C A 40 -69.515 129.334 84.158 1.00 39.68 P
ATOM 3 OP1 C A 40 -69.429 130.816 84.220 1.00 39.68 O
ATOM 4 OP2 C A 40 -69.088 128.545 85.332 1.00 39.68 O
ATOM 5 O5' C A 40 -70.987 128.906 83.718 1.00 39.68 O
ATOM 6 C5' C A 40 -71.662 129.603 82.672 1.00 39.68 C
ATOM 7 C4' C A 40 -73.000 128.980 82.343 1.00 39.68 C
ATOM 8 O4' C A 40 -72.833 127.578 82.019 1.00 39.68 O
ATOM 9 C3' C A 40 -74.028 128.997 83.458 1.00 39.68 C
ATOM 10 O3' C A 40 -74.724 130.219 83.514 1.00 39.68 O
ATOM 11 C2' C A 40 -74.924 127.820 83.121 1.00 39.68 C
ATOM 12 O2' C A 40 -75.886 128.192 82.149 1.00 39.68 O
ATOM 13 C1' C A 40 -73.938 126.839 82.483 1.00 39.68 C
ATOM 14 N1 C A 40 -73.449 125.835 83.438 1.00 39.23 N
ATOM 15 C2 C A 40 -74.343 125.057 84.175 1.00 39.23 C
ATOM 16 O2 C A 40 -75.555 125.230 84.023 1.00 39.23 O
ATOM 17 N3 C A 40 -73.852 124.145 85.047 1.00 39.23 N
ATOM 18 C4 C A 40 -72.526 124.014 85.168 1.00 39.23 C
ATOM 19 N4 C A 40 -72.062 123.115 86.024 1.00 39.23 N
ATOM 20 C5 C A 40 -71.592 124.788 84.422 1.00 39.23 C
ATOM 21 C6 C A 40 -72.101 125.677 83.570 1.00 39.23 C
ATOM 22 P C A 41 -74.974 130.938 84.917 1.00 48.42 P
ATOM 23 OP1 C A 41 -75.493 132.305 84.612 1.00 48.42 O
ATOM 24 OP2 C A 41 -73.719 130.810 85.696 1.00 48.42 O
ATOM 25 O5' C A 41 -76.128 130.035 85.574 1.00 48.42 O
TER
ATOM 1 O3' G B1335 -80.862 130.815 75.304 1.00 47.08 O
ATOM 2 P G B1336 -79.638 131.874 75.211 1.00 53.53 P
ATOM 3 OP1 G B1336 -80.187 133.219 75.562 1.00 53.53 O
ATOM 4 OP2 G B1336 -78.987 131.687 73.872 1.00 53.53 O
ATOM 5 O5' G B1336 -78.652 131.378 76.376 1.00 53.53 O
ATOM 6 C5' G B1336 -78.316 132.240 77.465 1.00 53.53 C
ATOM 7 C4' G B1336 -77.354 131.588 78.435 1.00 53.53 C
ATOM 8 O4' G B1336 -78.070 130.689 79.312 1.00 53.53 O
ATOM 9 C3' G B1336 -76.256 130.751 77.813 1.00 53.53 C
ATOM 10 O3' G B1336 -75.129 131.526 77.491 1.00 53.53 O
ATOM 11 C2' G B1336 -75.971 129.677 78.857 1.00 53.53 C
ATOM 12 O2' G B1336 -75.020 130.125 79.814 1.00 53.53 O
ATOM 13 C1' G B1336 -77.328 129.519 79.539 1.00 53.53 C
ATOM 14 N9 G B1336 -78.104 128.399 78.996 1.00 53.70 N
ATOM 15 C8 G B1336 -78.876 128.546 77.881 1.00 53.70 C
ATOM 16 N7 G B1336 -79.523 127.469 77.576 1.00 53.70 N
ATOM 17 C5 G B1336 -79.166 126.570 78.559 1.00 53.70 C
ATOM 18 C6 G B1336 -79.574 125.236 78.711 1.00 53.70 C
ATOM 19 O6 G B1336 -80.336 124.592 77.993 1.00 53.70 O
ATOM 20 N1 G B1336 -79.004 124.646 79.819 1.00 53.70 N
ATOM 21 C2 G B1336 -78.145 125.275 80.668 1.00 53.70 C
ATOM 22 N2 G B1336 -77.721 124.496 81.675 1.00 53.70 N
ATOM 23 N3 G B1336 -77.749 126.535 80.538 1.00 53.70 N
ATOM 24 C4 G B1336 -78.298 127.122 79.462 1.00 53.70 C
ATOM 25 P A B1337 -74.123 131.030 76.364 1.00 49.03 P
ATOM 26 OP1 A B1337 -73.084 132.073 76.230 1.00 49.03 O
ATOM 27 OP2 A B1337 -74.937 130.674 75.175 1.00 49.03 O
ATOM 28 O5' A B1337 -73.499 129.716 76.999 1.00 49.03 O
TER
ATOM 2 P C A 40 -69.515 129.334 84.158 1.00 39.68 P
ATOM 3 OP1 C A 40 -69.429 130.816 84.220 1.00 39.68 O
ATOM 4 OP2 C A 40 -69.088 128.545 85.332 1.00 39.68 O
ATOM 5 O5' C A 40 -70.987 128.906 83.718 1.00 39.68 O
ATOM 6 C5' C A 40 -71.662 129.603 82.672 1.00 39.68 C
ATOM 7 C4' C A 40 -73.000 128.980 82.343 1.00 39.68 C
ATOM 8 O4' C A 40 -72.833 127.578 82.019 1.00 39.68 O
ATOM 9 C3' C A 40 -74.028 128.997 83.458 1.00 39.68 C
ATOM 10 O3' C A 40 -74.724 130.219 83.514 1.00 39.68 O
ATOM 11 C2' C A 40 -74.924 127.820 83.121 1.00 39.68 C
ATOM 12 O2' C A 40 -75.886 128.192 82.149 1.00 39.68 O
ATOM 13 C1' C A 40 -73.938 126.839 82.483 1.00 39.68 C
ATOM 14 N1 C A 40 -73.449 125.835 83.438 1.00 39.23 N
ATOM 15 C2 C A 40 -74.343 125.057 84.175 1.00 39.23 C
ATOM 16 O2 C A 40 -75.555 125.230 84.023 1.00 39.23 O
ATOM 17 N3 C A 40 -73.852 124.145 85.047 1.00 39.23 N
ATOM 18 C4 C A 40 -72.526 124.014 85.168 1.00 39.23 C
ATOM 19 N4 C A 40 -72.062 123.115 86.024 1.00 39.23 N
ATOM 20 C5 C A 40 -71.592 124.788 84.422 1.00 39.23 C
ATOM 21 C6 C A 40 -72.101 125.677 83.570 1.00 39.23 C
ATOM 22 P C A 41 -74.974 130.938 84.917 1.00 48.42 P
ATOM 23 OP1 C A 41 -75.493 132.305 84.612 1.00 48.42 O
ATOM 24 OP2 C A 41 -73.719 130.810 85.696 1.00 48.42 O
ATOM 25 O5' C A 41 -76.128 130.035 85.574 1.00 48.42 O
TER
ATOM 1 O3' G B1335 -80.862 130.815 75.304 1.00 47.08 O
ATOM 2 P G B1336 -79.638 131.874 75.211 1.00 53.53 P
ATOM 3 OP1 G B1336 -80.187 133.219 75.562 1.00 53.53 O
ATOM 4 OP2 G B1336 -78.987 131.687 73.872 1.00 53.53 O
ATOM 5 O5' G B1336 -78.652 131.378 76.376 1.00 53.53 O
ATOM 6 C5' G B1336 -78.316 132.240 77.465 1.00 53.53 C
ATOM 7 C4' G B1336 -77.354 131.588 78.435 1.00 53.53 C
ATOM 8 O4' G B1336 -78.070 130.689 79.312 1.00 53.53 O
ATOM 9 C3' G B1336 -76.256 130.751 77.813 1.00 53.53 C
ATOM 10 O3' G B1336 -75.129 131.526 77.491 1.00 53.53 O
ATOM 11 C2' G B1336 -75.971 129.677 78.857 1.00 53.53 C
ATOM 12 O2' G B1336 -75.020 130.125 79.814 1.00 53.53 O
ATOM 13 C1' G B1336 -77.328 129.519 79.539 1.00 53.53 C
ATOM 14 N9 G B1336 -78.104 128.399 78.996 1.00 53.70 N
ATOM 15 C8 G B1336 -78.876 128.546 77.881 1.00 53.70 C
ATOM 16 N7 G B1336 -79.523 127.469 77.576 1.00 53.70 N
ATOM 17 C5 G B1336 -79.166 126.570 78.559 1.00 53.70 C
ATOM 18 C6 G B1336 -79.574 125.236 78.711 1.00 53.70 C
ATOM 19 O6 G B1336 -80.336 124.592 77.993 1.00 53.70 O
ATOM 20 N1 G B1336 -79.004 124.646 79.819 1.00 53.70 N
ATOM 21 C2 G B1336 -78.145 125.275 80.668 1.00 53.70 C
ATOM 22 N2 G B1336 -77.721 124.496 81.675 1.00 53.70 N
ATOM 23 N3 G B1336 -77.749 126.535 80.538 1.00 53.70 N
ATOM 24 C4 G B1336 -78.298 127.122 79.462 1.00 53.70 C
ATOM 25 P A B1337 -74.123 131.030 76.364 1.00 49.03 P
ATOM 26 OP1 A B1337 -73.084 132.073 76.230 1.00 49.03 O
ATOM 27 OP2 A B1337 -74.937 130.674 75.175 1.00 49.03 O
ATOM 28 O5' A B1337 -73.499 129.716 76.999 1.00 49.03 O
TER
Atoms:
C2: (-74.343,125.057,84.175)
OP1: (-69.429,130.816,84.220)
OP2: (-69.088,128.545,85.332)
C4: (-72.526,124.014,85.168)
O5': (-70.987,128.906,83.718)
C3': (-74.028,128.997,83.458)
C1': (-73.938,126.839,82.483)
O4': (-72.833,127.578,82.019)
C5': (-71.662,129.603,82.672)
P: (-69.515,129.334,84.158)
O2: (-75.555,125.230,84.023)
C4': (-73.000,128.980,82.343)
C2': (-74.924,127.820,83.121)
O2': (-75.886,128.192,82.149)
N1: (-73.449,125.835,83.438)
N3: (-73.852,124.145,85.047)
N4: (-72.062,123.115,86.024)
C6: (-72.101,125.677,83.570)
C5: (-71.592,124.788,84.422)
O3': (-74.724,130.219,83.514)
OP1: (-69.429,130.816,84.220)
OP2: (-69.088,128.545,85.332)
C4: (-72.526,124.014,85.168)
O5': (-70.987,128.906,83.718)
C3': (-74.028,128.997,83.458)
C1': (-73.938,126.839,82.483)
O4': (-72.833,127.578,82.019)
C5': (-71.662,129.603,82.672)
P: (-69.515,129.334,84.158)
O2: (-75.555,125.230,84.023)
C4': (-73.000,128.980,82.343)
C2': (-74.924,127.820,83.121)
O2': (-75.886,128.192,82.149)
N1: (-73.449,125.835,83.438)
N3: (-73.852,124.145,85.047)
N4: (-72.062,123.115,86.024)
C6: (-72.101,125.677,83.570)
C5: (-71.592,124.788,84.422)
O3': (-74.724,130.219,83.514)
OP1: (-80.187,133.219,75.562)
OP2: (-78.987,131.687,73.872)
C3': (-76.256,130.751,77.813)
C1': (-77.328,129.519,79.539)
C5': (-78.316,132.240,77.465)
O6: (-80.336,124.592,77.993)
O4': (-78.070,130.689,79.312)
C8: (-78.876,128.546,77.881)
C2: (-78.145,125.275,80.668)
C6: (-79.574,125.236,78.711)
C5: (-79.166,126.570,78.559)
C4: (-78.298,127.122,79.462)
P: (-79.638,131.874,75.211)
C4': (-77.354,131.588,78.435)
C2': (-75.971,129.677,78.857)
O2': (-75.020,130.125,79.814)
N1: (-79.004,124.646,79.819)
N2: (-77.721,124.496,81.675)
N3: (-77.749,126.535,80.538)
N7: (-79.523,127.469,77.576)
N9: (-78.104,128.399,78.996)
O5': (-78.652,131.378,76.376)
O3': (-75.129,131.526,77.491)
OP2: (-78.987,131.687,73.872)
C3': (-76.256,130.751,77.813)
C1': (-77.328,129.519,79.539)
C5': (-78.316,132.240,77.465)
O6: (-80.336,124.592,77.993)
O4': (-78.070,130.689,79.312)
C8: (-78.876,128.546,77.881)
C2: (-78.145,125.275,80.668)
C6: (-79.574,125.236,78.711)
C5: (-79.166,126.570,78.559)
C4: (-78.298,127.122,79.462)
P: (-79.638,131.874,75.211)
C4': (-77.354,131.588,78.435)
C2': (-75.971,129.677,78.857)
O2': (-75.020,130.125,79.814)
N1: (-79.004,124.646,79.819)
N2: (-77.721,124.496,81.675)
N3: (-77.749,126.535,80.538)
N7: (-79.523,127.469,77.576)
N9: (-78.104,128.399,78.996)
O5': (-78.652,131.378,76.376)
O3': (-75.129,131.526,77.491)
Image (generated by PyMOL):