Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21477:21470
Extra
PDB:
ATOM 1 O3' C A1476 -82.242 -67.015 36.829 1.00 81.98 O
ATOM 2 P C A1477 -82.078 -68.436 37.540 1.00 83.18 P
ATOM 3 OP1 C A1477 -80.975 -68.304 38.503 1.00 82.69 O
ATOM 4 OP2 C A1477 -81.996 -69.470 36.469 1.00 83.45 O
ATOM 5 O5' C A1477 -83.433 -68.605 38.337 1.00 83.73 O
ATOM 6 C5' C A1477 -83.538 -68.140 39.669 1.00 83.62 C
ATOM 7 C4' C A1477 -84.761 -68.685 40.332 1.00 84.25 C
ATOM 8 O4' C A1477 -85.906 -68.493 39.466 1.00 84.70 O
ATOM 9 C3' C A1477 -84.750 -70.169 40.600 1.00 84.63 C
ATOM 10 O3' C A1477 -84.028 -70.501 41.757 1.00 84.42 O
ATOM 11 C2' C A1477 -86.228 -70.492 40.685 1.00 85.33 C
ATOM 12 O2' C A1477 -86.762 -70.069 41.935 1.00 85.45 O
ATOM 13 C1' C A1477 -86.784 -69.578 39.588 1.00 85.35 C
ATOM 14 N1 C A1477 -86.844 -70.252 38.282 1.00 85.57 N
ATOM 15 C2 C A1477 -87.883 -71.176 38.041 1.00 86.27 C
ATOM 16 O2 C A1477 -88.717 -71.408 38.932 1.00 86.69 O
ATOM 17 N3 C A1477 -87.956 -71.801 36.843 1.00 86.50 N
ATOM 18 C4 C A1477 -87.027 -71.504 35.925 1.00 86.05 C
ATOM 19 N4 C A1477 -87.137 -72.137 34.760 1.00 86.31 N
ATOM 20 C5 C A1477 -85.963 -70.550 36.148 1.00 85.35 C
ATOM 21 C6 C A1477 -85.904 -69.943 37.332 1.00 85.12 C
ATOM 22 P U A1478 -83.020 -71.730 41.717 1.00 85.86 P
ATOM 23 OP1 U A1478 -82.384 -71.835 43.060 1.00 85.67 O
ATOM 24 OP2 U A1478 -82.153 -71.545 40.528 1.00 85.46 O
ATOM 25 O5' U A1478 -84.008 -72.954 41.483 1.00 86.60 O
TER
ATOM 1 O3' A B1469 -88.145 -60.920 43.218 1.00 81.19 O
ATOM 2 P G B1470 -88.919 -61.038 41.815 1.00 78.91 P
ATOM 3 OP1 G B1470 -88.918 -59.694 41.173 1.00 78.67 O
ATOM 4 OP2 G B1470 -90.221 -61.709 42.068 1.00 79.66 O
ATOM 5 O5' G B1470 -87.958 -61.994 41.037 1.00 78.68 O
ATOM 6 C5' G B1470 -88.057 -62.138 39.665 1.00 78.82 C
ATOM 7 C4' G B1470 -87.657 -63.510 39.253 1.00 78.93 C
ATOM 8 O4' G B1470 -87.601 -64.378 40.413 1.00 79.05 O
ATOM 9 C3' G B1470 -88.614 -64.187 38.320 1.00 79.56 C
ATOM 10 O3' G B1470 -88.395 -63.789 36.986 1.00 79.46 O
ATOM 11 C2' G B1470 -88.338 -65.663 38.577 1.00 79.74 C
ATOM 12 O2' G B1470 -87.152 -66.060 37.918 1.00 79.32 O
ATOM 13 C1' G B1470 -88.060 -65.665 40.074 1.00 79.55 C
ATOM 14 N9 G B1470 -89.260 -65.943 40.868 1.00 80.15 N
ATOM 15 C8 G B1470 -89.854 -65.031 41.690 1.00 80.21 C
ATOM 16 N7 G B1470 -90.897 -65.485 42.315 1.00 80.81 N
ATOM 17 C5 G B1470 -91.008 -66.798 41.869 1.00 81.17 C
ATOM 18 C6 G B1470 -91.973 -67.801 42.183 1.00 81.88 C
ATOM 19 O6 G B1470 -92.937 -67.704 42.952 1.00 82.34 O
ATOM 20 N1 G B1470 -91.731 -69.001 41.524 1.00 82.05 N
ATOM 21 C2 G B1470 -90.699 -69.210 40.656 1.00 81.61 C
ATOM 22 N2 G B1470 -90.616 -70.429 40.121 1.00 81.88 N
ATOM 23 N3 G B1470 -89.790 -68.287 40.343 1.00 80.96 N
ATOM 24 C4 G B1470 -89.991 -67.103 40.982 1.00 80.76 C
ATOM 25 P U B1471 -88.865 -62.339 36.469 1.00 88.80 P
ATOM 26 OP1 U B1471 -87.970 -61.332 37.058 1.00 88.14 O
ATOM 27 OP2 U B1471 -90.325 -62.244 36.728 1.00 89.46 O
ATOM 28 O5' U B1471 -88.580 -62.438 34.915 1.00 88.81 O
TER
ATOM 2 P C A1477 -82.078 -68.436 37.540 1.00 83.18 P
ATOM 3 OP1 C A1477 -80.975 -68.304 38.503 1.00 82.69 O
ATOM 4 OP2 C A1477 -81.996 -69.470 36.469 1.00 83.45 O
ATOM 5 O5' C A1477 -83.433 -68.605 38.337 1.00 83.73 O
ATOM 6 C5' C A1477 -83.538 -68.140 39.669 1.00 83.62 C
ATOM 7 C4' C A1477 -84.761 -68.685 40.332 1.00 84.25 C
ATOM 8 O4' C A1477 -85.906 -68.493 39.466 1.00 84.70 O
ATOM 9 C3' C A1477 -84.750 -70.169 40.600 1.00 84.63 C
ATOM 10 O3' C A1477 -84.028 -70.501 41.757 1.00 84.42 O
ATOM 11 C2' C A1477 -86.228 -70.492 40.685 1.00 85.33 C
ATOM 12 O2' C A1477 -86.762 -70.069 41.935 1.00 85.45 O
ATOM 13 C1' C A1477 -86.784 -69.578 39.588 1.00 85.35 C
ATOM 14 N1 C A1477 -86.844 -70.252 38.282 1.00 85.57 N
ATOM 15 C2 C A1477 -87.883 -71.176 38.041 1.00 86.27 C
ATOM 16 O2 C A1477 -88.717 -71.408 38.932 1.00 86.69 O
ATOM 17 N3 C A1477 -87.956 -71.801 36.843 1.00 86.50 N
ATOM 18 C4 C A1477 -87.027 -71.504 35.925 1.00 86.05 C
ATOM 19 N4 C A1477 -87.137 -72.137 34.760 1.00 86.31 N
ATOM 20 C5 C A1477 -85.963 -70.550 36.148 1.00 85.35 C
ATOM 21 C6 C A1477 -85.904 -69.943 37.332 1.00 85.12 C
ATOM 22 P U A1478 -83.020 -71.730 41.717 1.00 85.86 P
ATOM 23 OP1 U A1478 -82.384 -71.835 43.060 1.00 85.67 O
ATOM 24 OP2 U A1478 -82.153 -71.545 40.528 1.00 85.46 O
ATOM 25 O5' U A1478 -84.008 -72.954 41.483 1.00 86.60 O
TER
ATOM 1 O3' A B1469 -88.145 -60.920 43.218 1.00 81.19 O
ATOM 2 P G B1470 -88.919 -61.038 41.815 1.00 78.91 P
ATOM 3 OP1 G B1470 -88.918 -59.694 41.173 1.00 78.67 O
ATOM 4 OP2 G B1470 -90.221 -61.709 42.068 1.00 79.66 O
ATOM 5 O5' G B1470 -87.958 -61.994 41.037 1.00 78.68 O
ATOM 6 C5' G B1470 -88.057 -62.138 39.665 1.00 78.82 C
ATOM 7 C4' G B1470 -87.657 -63.510 39.253 1.00 78.93 C
ATOM 8 O4' G B1470 -87.601 -64.378 40.413 1.00 79.05 O
ATOM 9 C3' G B1470 -88.614 -64.187 38.320 1.00 79.56 C
ATOM 10 O3' G B1470 -88.395 -63.789 36.986 1.00 79.46 O
ATOM 11 C2' G B1470 -88.338 -65.663 38.577 1.00 79.74 C
ATOM 12 O2' G B1470 -87.152 -66.060 37.918 1.00 79.32 O
ATOM 13 C1' G B1470 -88.060 -65.665 40.074 1.00 79.55 C
ATOM 14 N9 G B1470 -89.260 -65.943 40.868 1.00 80.15 N
ATOM 15 C8 G B1470 -89.854 -65.031 41.690 1.00 80.21 C
ATOM 16 N7 G B1470 -90.897 -65.485 42.315 1.00 80.81 N
ATOM 17 C5 G B1470 -91.008 -66.798 41.869 1.00 81.17 C
ATOM 18 C6 G B1470 -91.973 -67.801 42.183 1.00 81.88 C
ATOM 19 O6 G B1470 -92.937 -67.704 42.952 1.00 82.34 O
ATOM 20 N1 G B1470 -91.731 -69.001 41.524 1.00 82.05 N
ATOM 21 C2 G B1470 -90.699 -69.210 40.656 1.00 81.61 C
ATOM 22 N2 G B1470 -90.616 -70.429 40.121 1.00 81.88 N
ATOM 23 N3 G B1470 -89.790 -68.287 40.343 1.00 80.96 N
ATOM 24 C4 G B1470 -89.991 -67.103 40.982 1.00 80.76 C
ATOM 25 P U B1471 -88.865 -62.339 36.469 1.00 88.80 P
ATOM 26 OP1 U B1471 -87.970 -61.332 37.058 1.00 88.14 O
ATOM 27 OP2 U B1471 -90.325 -62.244 36.728 1.00 89.46 O
ATOM 28 O5' U B1471 -88.580 -62.438 34.915 1.00 88.81 O
TER
Atoms:
C2: (-87.883,-71.176,38.041)
OP1: (-80.975,-68.304,38.503)
OP2: (-81.996,-69.470,36.469)
C4: (-87.027,-71.504,35.925)
O5': (-83.433,-68.605,38.337)
C3': (-84.750,-70.169,40.600)
C1': (-86.784,-69.578,39.588)
O4': (-85.906,-68.493,39.466)
C5': (-83.538,-68.140,39.669)
P: (-82.078,-68.436,37.540)
O2: (-88.717,-71.408,38.932)
C4': (-84.761,-68.685,40.332)
C2': (-86.228,-70.492,40.685)
O2': (-86.762,-70.069,41.935)
N1: (-86.844,-70.252,38.282)
N3: (-87.956,-71.801,36.843)
N4: (-87.137,-72.137,34.760)
C6: (-85.904,-69.943,37.332)
C5: (-85.963,-70.550,36.148)
O3': (-84.028,-70.501,41.757)
OP1: (-80.975,-68.304,38.503)
OP2: (-81.996,-69.470,36.469)
C4: (-87.027,-71.504,35.925)
O5': (-83.433,-68.605,38.337)
C3': (-84.750,-70.169,40.600)
C1': (-86.784,-69.578,39.588)
O4': (-85.906,-68.493,39.466)
C5': (-83.538,-68.140,39.669)
P: (-82.078,-68.436,37.540)
O2: (-88.717,-71.408,38.932)
C4': (-84.761,-68.685,40.332)
C2': (-86.228,-70.492,40.685)
O2': (-86.762,-70.069,41.935)
N1: (-86.844,-70.252,38.282)
N3: (-87.956,-71.801,36.843)
N4: (-87.137,-72.137,34.760)
C6: (-85.904,-69.943,37.332)
C5: (-85.963,-70.550,36.148)
O3': (-84.028,-70.501,41.757)
OP1: (-88.918,-59.694,41.173)
OP2: (-90.221,-61.709,42.068)
C3': (-88.614,-64.187,38.320)
C1': (-88.060,-65.665,40.074)
C5': (-88.057,-62.138,39.665)
O6: (-92.937,-67.704,42.952)
O4': (-87.601,-64.378,40.413)
C8: (-89.854,-65.031,41.690)
C2: (-90.699,-69.210,40.656)
C6: (-91.973,-67.801,42.183)
C5: (-91.008,-66.798,41.869)
C4: (-89.991,-67.103,40.982)
P: (-88.919,-61.038,41.815)
C4': (-87.657,-63.510,39.253)
C2': (-88.338,-65.663,38.577)
O2': (-87.152,-66.060,37.918)
N1: (-91.731,-69.001,41.524)
N2: (-90.616,-70.429,40.121)
N3: (-89.790,-68.287,40.343)
N7: (-90.897,-65.485,42.315)
N9: (-89.260,-65.943,40.868)
O5': (-87.958,-61.994,41.037)
O3': (-88.395,-63.789,36.986)
OP2: (-90.221,-61.709,42.068)
C3': (-88.614,-64.187,38.320)
C1': (-88.060,-65.665,40.074)
C5': (-88.057,-62.138,39.665)
O6: (-92.937,-67.704,42.952)
O4': (-87.601,-64.378,40.413)
C8: (-89.854,-65.031,41.690)
C2: (-90.699,-69.210,40.656)
C6: (-91.973,-67.801,42.183)
C5: (-91.008,-66.798,41.869)
C4: (-89.991,-67.103,40.982)
P: (-88.919,-61.038,41.815)
C4': (-87.657,-63.510,39.253)
C2': (-88.338,-65.663,38.577)
O2': (-87.152,-66.060,37.918)
N1: (-91.731,-69.001,41.524)
N2: (-90.616,-70.429,40.121)
N3: (-89.790,-68.287,40.343)
N7: (-90.897,-65.485,42.315)
N9: (-89.260,-65.943,40.868)
O5': (-87.958,-61.994,41.037)
O3': (-88.395,-63.789,36.986)
Image (generated by PyMOL):