Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11272:11122
Extra
PDB:
ATOM 1 O3' C A1271 70.015 0.779 16.457 1.00 38.06 O
ATOM 2 P C A1272 70.617 0.298 17.869 1.00 36.42 P
ATOM 3 OP1 C A1272 71.712 1.198 18.182 1.00 36.47 O
ATOM 4 OP2 C A1272 70.881 -1.145 17.788 1.00 36.43 O
ATOM 5 O5' C A1272 69.447 0.564 18.874 1.00 36.05 O
ATOM 6 C5' C A1272 69.147 1.882 19.253 1.00 35.98 C
ATOM 7 C4' C A1272 68.093 1.920 20.287 1.00 35.62 C
ATOM 8 O4' C A1272 66.882 1.375 19.765 1.00 35.64 O
ATOM 9 C3' C A1272 68.344 1.089 21.496 1.00 35.29 C
ATOM 10 O3' C A1272 69.308 1.693 22.348 1.00 35.18 O
ATOM 11 C2' C A1272 66.939 1.006 22.089 1.00 35.03 C
ATOM 12 O2' C A1272 66.617 2.223 22.719 1.00 34.90 O
ATOM 13 C1' C A1272 66.091 0.928 20.831 1.00 35.29 C
ATOM 14 N1 C A1272 65.608 -0.411 20.522 1.00 35.29 N
ATOM 15 C2 C A1272 64.486 -0.903 21.165 1.00 35.03 C
ATOM 16 O2 C A1272 63.978 -0.230 22.069 1.00 34.79 O
ATOM 17 N3 C A1272 64.028 -2.116 20.797 1.00 35.07 N
ATOM 18 C4 C A1272 64.606 -2.777 19.809 1.00 35.36 C
ATOM 19 N4 C A1272 64.149 -3.957 19.433 1.00 35.43 N
ATOM 20 C5 C A1272 65.705 -2.263 19.140 1.00 35.63 C
ATOM 21 C6 C A1272 66.170 -1.083 19.513 1.00 35.58 C
ATOM 22 P U A1273 70.073 0.849 23.458 1.00 39.18 P
ATOM 23 OP1 U A1273 70.925 1.762 24.156 1.00 39.13 O
ATOM 24 OP2 U A1273 70.673 -0.315 22.774 1.00 39.37 O
ATOM 25 O5' U A1273 68.901 0.373 24.399 1.00 38.84 O
TER
ATOM 1 O3' G B1121 63.762 10.215 24.026 1.00 33.70 O
ATOM 2 P G B1122 65.264 10.644 23.699 1.00 37.17 P
ATOM 3 OP1 G B1122 65.875 11.192 24.927 1.00 36.98 O
ATOM 4 OP2 G B1122 65.217 11.483 22.520 1.00 37.54 O
ATOM 5 O5' G B1122 65.955 9.276 23.383 1.00 37.17 O
ATOM 6 C5' G B1122 67.169 8.917 24.037 1.00 37.06 C
ATOM 7 C4' G B1122 67.535 7.492 23.770 1.00 37.04 C
ATOM 8 O4' G B1122 66.859 6.642 24.733 1.00 36.69 O
ATOM 9 C3' G B1122 67.125 6.967 22.406 1.00 37.30 C
ATOM 10 O3' G B1122 68.095 7.197 21.435 1.00 37.63 O
ATOM 11 C2' G B1122 66.840 5.488 22.652 1.00 37.11 C
ATOM 12 O2' G B1122 68.026 4.728 22.596 1.00 37.17 O
ATOM 13 C1' G B1122 66.366 5.484 24.099 1.00 36.73 C
ATOM 14 N9 G B1122 64.899 5.475 24.262 1.00 36.58 N
ATOM 15 C8 G B1122 64.107 6.573 24.374 1.00 36.58 C
ATOM 16 N7 G B1122 62.882 6.277 24.692 1.00 36.41 N
ATOM 17 C5 G B1122 62.882 4.902 24.849 1.00 36.28 C
ATOM 18 C6 G B1122 61.864 3.987 25.226 1.00 36.08 C
ATOM 19 O6 G B1122 60.687 4.145 25.483 1.00 35.97 O
ATOM 20 N1 G B1122 62.338 2.705 25.262 1.00 36.03 N
ATOM 21 C2 G B1122 63.617 2.340 24.993 1.00 36.15 C
ATOM 22 N2 G B1122 63.917 1.043 25.089 1.00 36.09 N
ATOM 23 N3 G B1122 64.541 3.178 24.679 1.00 36.32 N
ATOM 24 C4 G B1122 64.120 4.420 24.600 1.00 36.39 C
ATOM 25 P A B1123 67.737 7.991 20.097 1.00 38.71 P
ATOM 26 OP1 A B1123 68.996 8.495 19.478 1.00 39.01 O
ATOM 27 OP2 A B1123 66.723 8.949 20.415 1.00 38.63 O
ATOM 28 O5' A B1123 67.136 6.887 19.188 1.00 38.82 O
TER
ATOM 2 P C A1272 70.617 0.298 17.869 1.00 36.42 P
ATOM 3 OP1 C A1272 71.712 1.198 18.182 1.00 36.47 O
ATOM 4 OP2 C A1272 70.881 -1.145 17.788 1.00 36.43 O
ATOM 5 O5' C A1272 69.447 0.564 18.874 1.00 36.05 O
ATOM 6 C5' C A1272 69.147 1.882 19.253 1.00 35.98 C
ATOM 7 C4' C A1272 68.093 1.920 20.287 1.00 35.62 C
ATOM 8 O4' C A1272 66.882 1.375 19.765 1.00 35.64 O
ATOM 9 C3' C A1272 68.344 1.089 21.496 1.00 35.29 C
ATOM 10 O3' C A1272 69.308 1.693 22.348 1.00 35.18 O
ATOM 11 C2' C A1272 66.939 1.006 22.089 1.00 35.03 C
ATOM 12 O2' C A1272 66.617 2.223 22.719 1.00 34.90 O
ATOM 13 C1' C A1272 66.091 0.928 20.831 1.00 35.29 C
ATOM 14 N1 C A1272 65.608 -0.411 20.522 1.00 35.29 N
ATOM 15 C2 C A1272 64.486 -0.903 21.165 1.00 35.03 C
ATOM 16 O2 C A1272 63.978 -0.230 22.069 1.00 34.79 O
ATOM 17 N3 C A1272 64.028 -2.116 20.797 1.00 35.07 N
ATOM 18 C4 C A1272 64.606 -2.777 19.809 1.00 35.36 C
ATOM 19 N4 C A1272 64.149 -3.957 19.433 1.00 35.43 N
ATOM 20 C5 C A1272 65.705 -2.263 19.140 1.00 35.63 C
ATOM 21 C6 C A1272 66.170 -1.083 19.513 1.00 35.58 C
ATOM 22 P U A1273 70.073 0.849 23.458 1.00 39.18 P
ATOM 23 OP1 U A1273 70.925 1.762 24.156 1.00 39.13 O
ATOM 24 OP2 U A1273 70.673 -0.315 22.774 1.00 39.37 O
ATOM 25 O5' U A1273 68.901 0.373 24.399 1.00 38.84 O
TER
ATOM 1 O3' G B1121 63.762 10.215 24.026 1.00 33.70 O
ATOM 2 P G B1122 65.264 10.644 23.699 1.00 37.17 P
ATOM 3 OP1 G B1122 65.875 11.192 24.927 1.00 36.98 O
ATOM 4 OP2 G B1122 65.217 11.483 22.520 1.00 37.54 O
ATOM 5 O5' G B1122 65.955 9.276 23.383 1.00 37.17 O
ATOM 6 C5' G B1122 67.169 8.917 24.037 1.00 37.06 C
ATOM 7 C4' G B1122 67.535 7.492 23.770 1.00 37.04 C
ATOM 8 O4' G B1122 66.859 6.642 24.733 1.00 36.69 O
ATOM 9 C3' G B1122 67.125 6.967 22.406 1.00 37.30 C
ATOM 10 O3' G B1122 68.095 7.197 21.435 1.00 37.63 O
ATOM 11 C2' G B1122 66.840 5.488 22.652 1.00 37.11 C
ATOM 12 O2' G B1122 68.026 4.728 22.596 1.00 37.17 O
ATOM 13 C1' G B1122 66.366 5.484 24.099 1.00 36.73 C
ATOM 14 N9 G B1122 64.899 5.475 24.262 1.00 36.58 N
ATOM 15 C8 G B1122 64.107 6.573 24.374 1.00 36.58 C
ATOM 16 N7 G B1122 62.882 6.277 24.692 1.00 36.41 N
ATOM 17 C5 G B1122 62.882 4.902 24.849 1.00 36.28 C
ATOM 18 C6 G B1122 61.864 3.987 25.226 1.00 36.08 C
ATOM 19 O6 G B1122 60.687 4.145 25.483 1.00 35.97 O
ATOM 20 N1 G B1122 62.338 2.705 25.262 1.00 36.03 N
ATOM 21 C2 G B1122 63.617 2.340 24.993 1.00 36.15 C
ATOM 22 N2 G B1122 63.917 1.043 25.089 1.00 36.09 N
ATOM 23 N3 G B1122 64.541 3.178 24.679 1.00 36.32 N
ATOM 24 C4 G B1122 64.120 4.420 24.600 1.00 36.39 C
ATOM 25 P A B1123 67.737 7.991 20.097 1.00 38.71 P
ATOM 26 OP1 A B1123 68.996 8.495 19.478 1.00 39.01 O
ATOM 27 OP2 A B1123 66.723 8.949 20.415 1.00 38.63 O
ATOM 28 O5' A B1123 67.136 6.887 19.188 1.00 38.82 O
TER
Atoms:
C2: (64.486,-0.903,21.165)
OP1: (71.712,1.198,18.182)
OP2: (70.881,-1.145,17.788)
C4: (64.606,-2.777,19.809)
O5': (69.447,0.564,18.874)
C3': (68.344,1.089,21.496)
C1': (66.091,0.928,20.831)
O4': (66.882,1.375,19.765)
C5': (69.147,1.882,19.253)
P: (70.617,0.298,17.869)
O2: (63.978,-0.230,22.069)
C4': (68.093,1.920,20.287)
C2': (66.939,1.006,22.089)
O2': (66.617,2.223,22.719)
N1: (65.608,-0.411,20.522)
N3: (64.028,-2.116,20.797)
N4: (64.149,-3.957,19.433)
C6: (66.170,-1.083,19.513)
C5: (65.705,-2.263,19.140)
O3': (69.308,1.693,22.348)
OP1: (71.712,1.198,18.182)
OP2: (70.881,-1.145,17.788)
C4: (64.606,-2.777,19.809)
O5': (69.447,0.564,18.874)
C3': (68.344,1.089,21.496)
C1': (66.091,0.928,20.831)
O4': (66.882,1.375,19.765)
C5': (69.147,1.882,19.253)
P: (70.617,0.298,17.869)
O2: (63.978,-0.230,22.069)
C4': (68.093,1.920,20.287)
C2': (66.939,1.006,22.089)
O2': (66.617,2.223,22.719)
N1: (65.608,-0.411,20.522)
N3: (64.028,-2.116,20.797)
N4: (64.149,-3.957,19.433)
C6: (66.170,-1.083,19.513)
C5: (65.705,-2.263,19.140)
O3': (69.308,1.693,22.348)
OP1: (65.875,11.192,24.927)
OP2: (65.217,11.483,22.520)
C3': (67.125,6.967,22.406)
C1': (66.366,5.484,24.099)
C5': (67.169,8.917,24.037)
O6: (60.687,4.145,25.483)
O4': (66.859,6.642,24.733)
C8: (64.107,6.573,24.374)
C2: (63.617,2.340,24.993)
C6: (61.864,3.987,25.226)
C5: (62.882,4.902,24.849)
C4: (64.120,4.420,24.600)
P: (65.264,10.644,23.699)
C4': (67.535,7.492,23.770)
C2': (66.840,5.488,22.652)
O2': (68.026,4.728,22.596)
N1: (62.338,2.705,25.262)
N2: (63.917,1.043,25.089)
N3: (64.541,3.178,24.679)
N7: (62.882,6.277,24.692)
N9: (64.899,5.475,24.262)
O5': (65.955,9.276,23.383)
O3': (68.095,7.197,21.435)
OP2: (65.217,11.483,22.520)
C3': (67.125,6.967,22.406)
C1': (66.366,5.484,24.099)
C5': (67.169,8.917,24.037)
O6: (60.687,4.145,25.483)
O4': (66.859,6.642,24.733)
C8: (64.107,6.573,24.374)
C2: (63.617,2.340,24.993)
C6: (61.864,3.987,25.226)
C5: (62.882,4.902,24.849)
C4: (64.120,4.420,24.600)
P: (65.264,10.644,23.699)
C4': (67.535,7.492,23.770)
C2': (66.840,5.488,22.652)
O2': (68.026,4.728,22.596)
N1: (62.338,2.705,25.262)
N2: (63.917,1.043,25.089)
N3: (64.541,3.178,24.679)
N7: (62.882,6.277,24.692)
N9: (64.899,5.475,24.262)
O5': (65.955,9.276,23.383)
O3': (68.095,7.197,21.435)
Image (generated by PyMOL):