Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11925:11812
Extra
PDB:
ATOM 1 O3' A A1924 11.812 52.148 86.461 1.00 52.57 O
ATOM 2 P C A1925 11.239 50.645 86.460 1.00 58.45 P
ATOM 3 OP1 C A1925 12.045 49.865 85.511 1.00 57.91 O
ATOM 4 OP2 C A1925 9.792 50.747 86.226 1.00 58.68 O
ATOM 5 O5' C A1925 11.499 50.141 87.947 1.00 58.42 O
ATOM 6 C5' C A1925 12.789 50.203 88.552 1.00 58.34 C
ATOM 7 C4' C A1925 12.694 50.034 90.054 1.00 58.51 C
ATOM 8 O4' C A1925 12.086 51.216 90.628 1.00 59.15 O
ATOM 9 C3' C A1925 11.818 48.879 90.518 1.00 58.27 C
ATOM 10 O3' C A1925 12.540 47.669 90.633 1.00 57.73 O
ATOM 11 C2' C A1925 11.215 49.359 91.839 1.00 58.75 C
ATOM 12 O2' C A1925 12.097 49.081 92.917 1.00 58.70 O
ATOM 13 C1' C A1925 11.172 50.869 91.645 1.00 59.31 C
ATOM 14 N1 C A1925 9.840 51.387 91.270 1.00 59.65 N
ATOM 15 C2 C A1925 8.954 51.762 92.275 1.00 60.10 C
ATOM 16 O2 C A1925 9.304 51.553 93.433 1.00 60.16 O
ATOM 17 N3 C A1925 7.758 52.310 91.956 1.00 60.46 N
ATOM 18 C4 C A1925 7.450 52.510 90.679 1.00 60.39 C
ATOM 19 N4 C A1925 6.288 53.083 90.407 1.00 60.77 N
ATOM 20 C5 C A1925 8.331 52.177 89.611 1.00 59.95 C
ATOM 21 C6 C A1925 9.519 51.643 89.949 1.00 59.60 C
ATOM 22 P A A1926 11.913 46.307 90.061 1.00 53.69 P
ATOM 23 OP1 A A1926 12.884 45.216 90.335 1.00 53.21 O
ATOM 24 OP2 A A1926 11.514 46.578 88.633 1.00 53.64 O
ATOM 25 O5' A A1926 10.612 46.118 90.960 1.00 53.95 O
TER
ATOM 1 O3' A B1811 14.330 43.078 98.797 1.00 53.78 O
ATOM 2 P G B1812 15.662 43.946 98.640 1.00 47.21 P
ATOM 3 OP1 G B1812 16.751 43.013 98.215 1.00 46.67 O
ATOM 4 OP2 G B1812 15.828 44.729 99.904 1.00 47.73 O
ATOM 5 O5' G B1812 15.280 44.931 97.443 1.00 47.36 O
ATOM 6 C5' G B1812 15.466 44.548 96.092 1.00 46.93 C
ATOM 7 C4' G B1812 14.779 45.494 95.162 1.00 47.18 C
ATOM 8 O4' G B1812 13.466 45.797 95.675 1.00 47.55 O
ATOM 9 C3' G B1812 15.420 46.849 95.023 1.00 47.57 C
ATOM 10 O3' G B1812 16.503 46.831 94.153 1.00 47.27 O
ATOM 11 C2' G B1812 14.273 47.710 94.540 1.00 47.94 C
ATOM 12 O2' G B1812 14.034 47.480 93.168 1.00 47.64 O
ATOM 13 C1' G B1812 13.111 47.118 95.338 1.00 48.02 C
ATOM 14 N9 G B1812 12.882 47.844 96.591 1.00 48.56 N
ATOM 15 C8 G B1812 13.281 47.353 97.807 1.00 48.57 C
ATOM 16 N7 G B1812 13.010 48.149 98.814 1.00 49.11 N
ATOM 17 C5 G B1812 12.381 49.218 98.188 1.00 49.47 C
ATOM 18 C6 G B1812 11.872 50.377 98.797 1.00 50.12 C
ATOM 19 O6 G B1812 11.864 50.666 99.995 1.00 50.49 O
ATOM 20 N1 G B1812 11.355 51.223 97.842 1.00 50.33 N
ATOM 21 C2 G B1812 11.298 50.972 96.497 1.00 49.97 C
ATOM 22 N2 G B1812 10.689 51.968 95.824 1.00 50.33 N
ATOM 23 N3 G B1812 11.759 49.878 95.896 1.00 49.36 N
ATOM 24 C4 G B1812 12.291 49.056 96.809 1.00 49.14 C
ATOM 25 P C B1813 17.876 47.500 94.587 1.00 45.24 P
ATOM 26 OP1 C B1813 18.883 47.096 93.577 1.00 44.80 O
ATOM 27 OP2 C B1813 18.117 47.151 95.993 1.00 45.35 O
ATOM 28 O5' C B1813 17.557 49.042 94.471 1.00 45.83 O
TER
ATOM 2 P C A1925 11.239 50.645 86.460 1.00 58.45 P
ATOM 3 OP1 C A1925 12.045 49.865 85.511 1.00 57.91 O
ATOM 4 OP2 C A1925 9.792 50.747 86.226 1.00 58.68 O
ATOM 5 O5' C A1925 11.499 50.141 87.947 1.00 58.42 O
ATOM 6 C5' C A1925 12.789 50.203 88.552 1.00 58.34 C
ATOM 7 C4' C A1925 12.694 50.034 90.054 1.00 58.51 C
ATOM 8 O4' C A1925 12.086 51.216 90.628 1.00 59.15 O
ATOM 9 C3' C A1925 11.818 48.879 90.518 1.00 58.27 C
ATOM 10 O3' C A1925 12.540 47.669 90.633 1.00 57.73 O
ATOM 11 C2' C A1925 11.215 49.359 91.839 1.00 58.75 C
ATOM 12 O2' C A1925 12.097 49.081 92.917 1.00 58.70 O
ATOM 13 C1' C A1925 11.172 50.869 91.645 1.00 59.31 C
ATOM 14 N1 C A1925 9.840 51.387 91.270 1.00 59.65 N
ATOM 15 C2 C A1925 8.954 51.762 92.275 1.00 60.10 C
ATOM 16 O2 C A1925 9.304 51.553 93.433 1.00 60.16 O
ATOM 17 N3 C A1925 7.758 52.310 91.956 1.00 60.46 N
ATOM 18 C4 C A1925 7.450 52.510 90.679 1.00 60.39 C
ATOM 19 N4 C A1925 6.288 53.083 90.407 1.00 60.77 N
ATOM 20 C5 C A1925 8.331 52.177 89.611 1.00 59.95 C
ATOM 21 C6 C A1925 9.519 51.643 89.949 1.00 59.60 C
ATOM 22 P A A1926 11.913 46.307 90.061 1.00 53.69 P
ATOM 23 OP1 A A1926 12.884 45.216 90.335 1.00 53.21 O
ATOM 24 OP2 A A1926 11.514 46.578 88.633 1.00 53.64 O
ATOM 25 O5' A A1926 10.612 46.118 90.960 1.00 53.95 O
TER
ATOM 1 O3' A B1811 14.330 43.078 98.797 1.00 53.78 O
ATOM 2 P G B1812 15.662 43.946 98.640 1.00 47.21 P
ATOM 3 OP1 G B1812 16.751 43.013 98.215 1.00 46.67 O
ATOM 4 OP2 G B1812 15.828 44.729 99.904 1.00 47.73 O
ATOM 5 O5' G B1812 15.280 44.931 97.443 1.00 47.36 O
ATOM 6 C5' G B1812 15.466 44.548 96.092 1.00 46.93 C
ATOM 7 C4' G B1812 14.779 45.494 95.162 1.00 47.18 C
ATOM 8 O4' G B1812 13.466 45.797 95.675 1.00 47.55 O
ATOM 9 C3' G B1812 15.420 46.849 95.023 1.00 47.57 C
ATOM 10 O3' G B1812 16.503 46.831 94.153 1.00 47.27 O
ATOM 11 C2' G B1812 14.273 47.710 94.540 1.00 47.94 C
ATOM 12 O2' G B1812 14.034 47.480 93.168 1.00 47.64 O
ATOM 13 C1' G B1812 13.111 47.118 95.338 1.00 48.02 C
ATOM 14 N9 G B1812 12.882 47.844 96.591 1.00 48.56 N
ATOM 15 C8 G B1812 13.281 47.353 97.807 1.00 48.57 C
ATOM 16 N7 G B1812 13.010 48.149 98.814 1.00 49.11 N
ATOM 17 C5 G B1812 12.381 49.218 98.188 1.00 49.47 C
ATOM 18 C6 G B1812 11.872 50.377 98.797 1.00 50.12 C
ATOM 19 O6 G B1812 11.864 50.666 99.995 1.00 50.49 O
ATOM 20 N1 G B1812 11.355 51.223 97.842 1.00 50.33 N
ATOM 21 C2 G B1812 11.298 50.972 96.497 1.00 49.97 C
ATOM 22 N2 G B1812 10.689 51.968 95.824 1.00 50.33 N
ATOM 23 N3 G B1812 11.759 49.878 95.896 1.00 49.36 N
ATOM 24 C4 G B1812 12.291 49.056 96.809 1.00 49.14 C
ATOM 25 P C B1813 17.876 47.500 94.587 1.00 45.24 P
ATOM 26 OP1 C B1813 18.883 47.096 93.577 1.00 44.80 O
ATOM 27 OP2 C B1813 18.117 47.151 95.993 1.00 45.35 O
ATOM 28 O5' C B1813 17.557 49.042 94.471 1.00 45.83 O
TER
Atoms:
C2: (8.954,51.762,92.275)
OP1: (12.045,49.865,85.511)
OP2: (9.792,50.747,86.226)
C4: (7.450,52.510,90.679)
O5': (11.499,50.141,87.947)
C3': (11.818,48.879,90.518)
C1': (11.172,50.869,91.645)
O4': (12.086,51.216,90.628)
C5': (12.789,50.203,88.552)
P: (11.239,50.645,86.460)
O2: (9.304,51.553,93.433)
C4': (12.694,50.034,90.054)
C2': (11.215,49.359,91.839)
O2': (12.097,49.081,92.917)
N1: (9.840,51.387,91.270)
N3: (7.758,52.310,91.956)
N4: (6.288,53.083,90.407)
C6: (9.519,51.643,89.949)
C5: (8.331,52.177,89.611)
O3': (12.540,47.669,90.633)
OP1: (12.045,49.865,85.511)
OP2: (9.792,50.747,86.226)
C4: (7.450,52.510,90.679)
O5': (11.499,50.141,87.947)
C3': (11.818,48.879,90.518)
C1': (11.172,50.869,91.645)
O4': (12.086,51.216,90.628)
C5': (12.789,50.203,88.552)
P: (11.239,50.645,86.460)
O2: (9.304,51.553,93.433)
C4': (12.694,50.034,90.054)
C2': (11.215,49.359,91.839)
O2': (12.097,49.081,92.917)
N1: (9.840,51.387,91.270)
N3: (7.758,52.310,91.956)
N4: (6.288,53.083,90.407)
C6: (9.519,51.643,89.949)
C5: (8.331,52.177,89.611)
O3': (12.540,47.669,90.633)
OP1: (16.751,43.013,98.215)
OP2: (15.828,44.729,99.904)
C3': (15.420,46.849,95.023)
C1': (13.111,47.118,95.338)
C5': (15.466,44.548,96.092)
O6: (11.864,50.666,99.995)
O4': (13.466,45.797,95.675)
C8: (13.281,47.353,97.807)
C2: (11.298,50.972,96.497)
C6: (11.872,50.377,98.797)
C5: (12.381,49.218,98.188)
C4: (12.291,49.056,96.809)
P: (15.662,43.946,98.640)
C4': (14.779,45.494,95.162)
C2': (14.273,47.710,94.540)
O2': (14.034,47.480,93.168)
N1: (11.355,51.223,97.842)
N2: (10.689,51.968,95.824)
N3: (11.759,49.878,95.896)
N7: (13.010,48.149,98.814)
N9: (12.882,47.844,96.591)
O5': (15.280,44.931,97.443)
O3': (16.503,46.831,94.153)
OP2: (15.828,44.729,99.904)
C3': (15.420,46.849,95.023)
C1': (13.111,47.118,95.338)
C5': (15.466,44.548,96.092)
O6: (11.864,50.666,99.995)
O4': (13.466,45.797,95.675)
C8: (13.281,47.353,97.807)
C2: (11.298,50.972,96.497)
C6: (11.872,50.377,98.797)
C5: (12.381,49.218,98.188)
C4: (12.291,49.056,96.809)
P: (15.662,43.946,98.640)
C4': (14.779,45.494,95.162)
C2': (14.273,47.710,94.540)
O2': (14.034,47.480,93.168)
N1: (11.355,51.223,97.842)
N2: (10.689,51.968,95.824)
N3: (11.759,49.878,95.896)
N7: (13.010,48.149,98.814)
N9: (12.882,47.844,96.591)
O5': (15.280,44.931,97.443)
O3': (16.503,46.831,94.153)
Image (generated by PyMOL):