Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3Q3Z:V61:V54
Extra
PDB:
ATOM 1 O3' G A 60 -7.368 18.141 16.793 1.00 56.21 O
ATOM 2 P C A 61 -7.973 18.190 18.275 1.00 62.14 P
ATOM 3 OP1 C A 61 -6.990 18.901 19.124 1.00 62.73 O
ATOM 4 OP2 C A 61 -8.410 16.831 18.670 1.00 62.61 O
ATOM 5 O5' C A 61 -9.274 19.111 18.089 1.00 61.69 O
ATOM 6 C5' C A 61 -9.128 20.497 17.773 1.00 61.26 C
ATOM 7 C4' C A 61 -10.445 21.139 17.351 1.00 61.07 C
ATOM 8 O4' C A 61 -10.966 20.486 16.163 1.00 59.02 O
ATOM 9 C3' C A 61 -11.591 21.052 18.345 1.00 58.58 C
ATOM 10 O3' C A 61 -11.501 22.059 19.339 1.00 58.11 O
ATOM 11 C2' C A 61 -12.787 21.290 17.428 1.00 60.14 C
ATOM 12 O2' C A 61 -13.004 22.657 17.131 1.00 66.22 O
ATOM 13 C1' C A 61 -12.383 20.533 16.168 1.00 57.24 C
ATOM 14 N1 C A 61 -12.968 19.145 16.092 1.00 57.34 N
ATOM 15 C2 C A 61 -14.268 18.964 15.587 1.00 60.40 C
ATOM 16 O2 C A 61 -14.919 19.944 15.213 1.00 61.93 O
ATOM 17 N3 C A 61 -14.787 17.707 15.516 1.00 61.25 N
ATOM 18 C4 C A 61 -14.067 16.661 15.926 1.00 59.06 C
ATOM 19 N4 C A 61 -14.619 15.449 15.840 1.00 56.79 N
ATOM 20 C5 C A 61 -12.747 16.818 16.443 1.00 58.54 C
ATOM 21 C6 C A 61 -12.245 18.058 16.510 1.00 57.88 C
ATOM 22 P A A 62 -11.036 21.805 20.852 1.00 66.59 P
ATOM 23 OP1 A A 62 -11.860 22.713 21.684 1.00 67.33 O
ATOM 24 OP2 A A 62 -9.559 21.904 20.888 1.00 61.77 O
ATOM 25 O5' A A 62 -11.442 20.298 21.218 1.00 62.98 O
TER
ATOM 1 O3' U B 53 -8.478 4.890 20.133 1.00 43.50 O
ATOM 2 P A B 54 -9.118 6.103 19.332 1.00 53.26 P
ATOM 3 OP1 A B 54 -9.828 5.499 18.188 1.00 55.66 O
ATOM 4 OP2 A B 54 -8.094 7.156 19.097 1.00 44.80 O
ATOM 5 O5' A B 54 -10.157 6.695 20.391 1.00 51.17 O
ATOM 6 C5' A B 54 -11.183 5.884 20.940 1.00 50.87 C
ATOM 7 C4' A B 54 -12.544 6.444 20.584 1.00 49.21 C
ATOM 8 O4' A B 54 -12.543 7.882 20.743 1.00 49.03 O
ATOM 9 C3' A B 54 -12.957 6.220 19.143 1.00 48.21 C
ATOM 10 O3' A B 54 -13.506 4.919 19.001 1.00 50.78 O
ATOM 11 C2' A B 54 -13.976 7.332 18.945 1.00 49.00 C
ATOM 12 O2' A B 54 -15.260 6.980 19.410 1.00 51.07 O
ATOM 13 C1' A B 54 -13.417 8.465 19.800 1.00 45.09 C
ATOM 14 N9 A B 54 -12.686 9.504 19.081 1.00 45.56 N
ATOM 15 C8 A B 54 -11.332 9.631 18.951 1.00 49.03 C
ATOM 16 N7 A B 54 -10.959 10.685 18.263 1.00 52.60 N
ATOM 17 C5 A B 54 -12.148 11.298 17.918 1.00 48.75 C
ATOM 18 C6 A B 54 -12.437 12.471 17.187 1.00 50.86 C
ATOM 19 N6 A B 54 -11.499 13.251 16.645 1.00 49.51 N
ATOM 20 N1 A B 54 -13.732 12.808 17.024 1.00 48.76 N
ATOM 21 C2 A B 54 -14.669 12.020 17.568 1.00 50.00 C
ATOM 22 N3 A B 54 -14.517 10.895 18.273 1.00 48.13 N
ATOM 23 C4 A B 54 -13.221 10.584 18.415 1.00 47.13 C
ATOM 24 P G B 55 -13.449 4.114 17.621 1.00 51.93 P
ATOM 25 OP1 G B 55 -14.117 2.810 17.834 1.00 63.55 O
ATOM 26 OP2 G B 55 -12.064 4.153 17.116 1.00 52.80 O
ATOM 27 O5' G B 55 -14.354 4.996 16.651 1.00 54.38 O
TER
ATOM 2 P C A 61 -7.973 18.190 18.275 1.00 62.14 P
ATOM 3 OP1 C A 61 -6.990 18.901 19.124 1.00 62.73 O
ATOM 4 OP2 C A 61 -8.410 16.831 18.670 1.00 62.61 O
ATOM 5 O5' C A 61 -9.274 19.111 18.089 1.00 61.69 O
ATOM 6 C5' C A 61 -9.128 20.497 17.773 1.00 61.26 C
ATOM 7 C4' C A 61 -10.445 21.139 17.351 1.00 61.07 C
ATOM 8 O4' C A 61 -10.966 20.486 16.163 1.00 59.02 O
ATOM 9 C3' C A 61 -11.591 21.052 18.345 1.00 58.58 C
ATOM 10 O3' C A 61 -11.501 22.059 19.339 1.00 58.11 O
ATOM 11 C2' C A 61 -12.787 21.290 17.428 1.00 60.14 C
ATOM 12 O2' C A 61 -13.004 22.657 17.131 1.00 66.22 O
ATOM 13 C1' C A 61 -12.383 20.533 16.168 1.00 57.24 C
ATOM 14 N1 C A 61 -12.968 19.145 16.092 1.00 57.34 N
ATOM 15 C2 C A 61 -14.268 18.964 15.587 1.00 60.40 C
ATOM 16 O2 C A 61 -14.919 19.944 15.213 1.00 61.93 O
ATOM 17 N3 C A 61 -14.787 17.707 15.516 1.00 61.25 N
ATOM 18 C4 C A 61 -14.067 16.661 15.926 1.00 59.06 C
ATOM 19 N4 C A 61 -14.619 15.449 15.840 1.00 56.79 N
ATOM 20 C5 C A 61 -12.747 16.818 16.443 1.00 58.54 C
ATOM 21 C6 C A 61 -12.245 18.058 16.510 1.00 57.88 C
ATOM 22 P A A 62 -11.036 21.805 20.852 1.00 66.59 P
ATOM 23 OP1 A A 62 -11.860 22.713 21.684 1.00 67.33 O
ATOM 24 OP2 A A 62 -9.559 21.904 20.888 1.00 61.77 O
ATOM 25 O5' A A 62 -11.442 20.298 21.218 1.00 62.98 O
TER
ATOM 1 O3' U B 53 -8.478 4.890 20.133 1.00 43.50 O
ATOM 2 P A B 54 -9.118 6.103 19.332 1.00 53.26 P
ATOM 3 OP1 A B 54 -9.828 5.499 18.188 1.00 55.66 O
ATOM 4 OP2 A B 54 -8.094 7.156 19.097 1.00 44.80 O
ATOM 5 O5' A B 54 -10.157 6.695 20.391 1.00 51.17 O
ATOM 6 C5' A B 54 -11.183 5.884 20.940 1.00 50.87 C
ATOM 7 C4' A B 54 -12.544 6.444 20.584 1.00 49.21 C
ATOM 8 O4' A B 54 -12.543 7.882 20.743 1.00 49.03 O
ATOM 9 C3' A B 54 -12.957 6.220 19.143 1.00 48.21 C
ATOM 10 O3' A B 54 -13.506 4.919 19.001 1.00 50.78 O
ATOM 11 C2' A B 54 -13.976 7.332 18.945 1.00 49.00 C
ATOM 12 O2' A B 54 -15.260 6.980 19.410 1.00 51.07 O
ATOM 13 C1' A B 54 -13.417 8.465 19.800 1.00 45.09 C
ATOM 14 N9 A B 54 -12.686 9.504 19.081 1.00 45.56 N
ATOM 15 C8 A B 54 -11.332 9.631 18.951 1.00 49.03 C
ATOM 16 N7 A B 54 -10.959 10.685 18.263 1.00 52.60 N
ATOM 17 C5 A B 54 -12.148 11.298 17.918 1.00 48.75 C
ATOM 18 C6 A B 54 -12.437 12.471 17.187 1.00 50.86 C
ATOM 19 N6 A B 54 -11.499 13.251 16.645 1.00 49.51 N
ATOM 20 N1 A B 54 -13.732 12.808 17.024 1.00 48.76 N
ATOM 21 C2 A B 54 -14.669 12.020 17.568 1.00 50.00 C
ATOM 22 N3 A B 54 -14.517 10.895 18.273 1.00 48.13 N
ATOM 23 C4 A B 54 -13.221 10.584 18.415 1.00 47.13 C
ATOM 24 P G B 55 -13.449 4.114 17.621 1.00 51.93 P
ATOM 25 OP1 G B 55 -14.117 2.810 17.834 1.00 63.55 O
ATOM 26 OP2 G B 55 -12.064 4.153 17.116 1.00 52.80 O
ATOM 27 O5' G B 55 -14.354 4.996 16.651 1.00 54.38 O
TER
Atoms:
C2: (-14.268,18.964,15.587)
OP1: (-6.990,18.901,19.124)
OP2: (-8.410,16.831,18.670)
C4: (-14.067,16.661,15.926)
O5': (-9.274,19.111,18.089)
C3': (-11.591,21.052,18.345)
C1': (-12.383,20.533,16.168)
O4': (-10.966,20.486,16.163)
C5': (-9.128,20.497,17.773)
P: (-7.973,18.190,18.275)
O2: (-14.919,19.944,15.213)
C4': (-10.445,21.139,17.351)
C2': (-12.787,21.290,17.428)
O2': (-13.004,22.657,17.131)
N1: (-12.968,19.145,16.092)
N3: (-14.787,17.707,15.516)
N4: (-14.619,15.449,15.840)
C6: (-12.245,18.058,16.510)
C5: (-12.747,16.818,16.443)
O3': (-11.501,22.059,19.339)
OP1: (-6.990,18.901,19.124)
OP2: (-8.410,16.831,18.670)
C4: (-14.067,16.661,15.926)
O5': (-9.274,19.111,18.089)
C3': (-11.591,21.052,18.345)
C1': (-12.383,20.533,16.168)
O4': (-10.966,20.486,16.163)
C5': (-9.128,20.497,17.773)
P: (-7.973,18.190,18.275)
O2: (-14.919,19.944,15.213)
C4': (-10.445,21.139,17.351)
C2': (-12.787,21.290,17.428)
O2': (-13.004,22.657,17.131)
N1: (-12.968,19.145,16.092)
N3: (-14.787,17.707,15.516)
N4: (-14.619,15.449,15.840)
C6: (-12.245,18.058,16.510)
C5: (-12.747,16.818,16.443)
O3': (-11.501,22.059,19.339)
OP1: (-9.828,5.499,18.188)
OP2: (-8.094,7.156,19.097)
C3': (-12.957,6.220,19.143)
C1': (-13.417,8.465,19.800)
C5': (-11.183,5.884,20.940)
O4': (-12.543,7.882,20.743)
C8: (-11.332,9.631,18.951)
O2': (-15.260,6.980,19.410)
C6: (-12.437,12.471,17.187)
C5: (-12.148,11.298,17.918)
C4: (-13.221,10.584,18.415)
P: (-9.118,6.103,19.332)
C4': (-12.544,6.444,20.584)
C2': (-13.976,7.332,18.945)
C2: (-14.669,12.020,17.568)
N1: (-13.732,12.808,17.024)
N3: (-14.517,10.895,18.273)
N6: (-11.499,13.251,16.645)
N7: (-10.959,10.685,18.263)
N9: (-12.686,9.504,19.081)
O5': (-10.157,6.695,20.391)
O3': (-13.506,4.919,19.001)
OP2: (-8.094,7.156,19.097)
C3': (-12.957,6.220,19.143)
C1': (-13.417,8.465,19.800)
C5': (-11.183,5.884,20.940)
O4': (-12.543,7.882,20.743)
C8: (-11.332,9.631,18.951)
O2': (-15.260,6.980,19.410)
C6: (-12.437,12.471,17.187)
C5: (-12.148,11.298,17.918)
C4: (-13.221,10.584,18.415)
P: (-9.118,6.103,19.332)
C4': (-12.544,6.444,20.584)
C2': (-13.976,7.332,18.945)
C2: (-14.669,12.020,17.568)
N1: (-13.732,12.808,17.024)
N3: (-14.517,10.895,18.273)
N6: (-11.499,13.251,16.645)
N7: (-10.959,10.685,18.263)
N9: (-12.686,9.504,19.081)
O5': (-10.157,6.695,20.391)
O3': (-13.506,4.919,19.001)
Image (generated by PyMOL):