Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1967:A2491
Extra
PDB:
ATOM 1 O3' C A1966 -69.099 -68.422 -12.028 1.00 1.27 O
ATOM 2 P A A1967 -69.220 -67.489 -10.756 1.00 2.13 P
ATOM 3 OP1 A A1967 -68.149 -66.476 -10.860 1.00 2.13 O
ATOM 4 OP2 A A1967 -69.320 -68.320 -9.552 1.00 2.13 O
ATOM 5 O5' A A1967 -70.649 -66.826 -10.892 1.00 1.23 O
ATOM 6 C5' A A1967 -71.453 -66.637 -9.717 1.00 1.23 C
ATOM 7 C4' A A1967 -72.527 -67.679 -9.659 1.00 1.23 C
ATOM 8 O4' A A1967 -71.908 -68.981 -9.629 1.00 1.23 O
ATOM 9 C3' A A1967 -73.474 -67.613 -8.468 1.00 1.23 C
ATOM 10 O3' A A1967 -74.755 -67.979 -8.911 1.00 1.23 O
ATOM 11 C2' A A1967 -72.984 -68.726 -7.553 1.00 1.23 C
ATOM 12 O2' A A1967 -74.055 -69.277 -6.797 1.00 1.23 O
ATOM 13 C1' A A1967 -72.459 -69.737 -8.573 1.00 1.23 C
ATOM 14 N9 A A1967 -71.441 -70.668 -8.080 1.00 9.79 N
ATOM 15 C8 A A1967 -70.085 -70.606 -8.250 1.00 9.79 C
ATOM 16 N7 A A1967 -69.440 -71.619 -7.733 1.00 9.79 N
ATOM 17 C5 A A1967 -70.437 -72.399 -7.167 1.00 9.79 C
ATOM 18 C6 A A1967 -70.399 -73.604 -6.463 1.00 9.79 C
ATOM 19 N6 A A1967 -69.281 -74.250 -6.169 1.00 9.79 N
ATOM 20 N1 A A1967 -71.565 -74.124 -6.055 1.00 9.79 N
ATOM 21 C2 A A1967 -72.692 -73.455 -6.314 1.00 9.79 C
ATOM 22 N3 A A1967 -72.859 -72.303 -6.946 1.00 9.79 N
ATOM 23 C4 A A1967 -71.675 -71.822 -7.364 1.00 9.79 C
ATOM 24 P G A1968 -75.979 -66.989 -8.684 1.00 0.79 P
ATOM 25 OP1 G A1968 -76.205 -66.327 -10.001 1.00 4.17 O
ATOM 26 OP2 G A1968 -75.735 -66.184 -7.454 1.00 4.17 O
ATOM 27 O5' G A1968 -77.221 -67.922 -8.399 1.00 0.92 O
TER
ATOM 1 O3' U B2490 -62.632 -72.875 -1.589 1.00 8.65 O
ATOM 2 P A B2491 -63.408 -73.255 -2.938 1.00 10.42 P
ATOM 3 OP1 A B2491 -62.726 -74.479 -3.411 1.00 15.27 O
ATOM 4 OP2 A B2491 -63.491 -72.061 -3.824 1.00 15.27 O
ATOM 5 O5' A B2491 -64.878 -73.626 -2.469 1.00 1.79 O
ATOM 6 C5' A B2491 -65.081 -74.262 -1.212 1.00 1.79 C
ATOM 7 C4' A B2491 -66.290 -75.145 -1.275 1.00 1.79 C
ATOM 8 O4' A B2491 -67.478 -74.321 -1.306 1.00 1.79 O
ATOM 9 C3' A B2491 -66.341 -76.068 -2.483 1.00 1.79 C
ATOM 10 O3' A B2491 -66.905 -77.332 -2.117 1.00 1.79 O
ATOM 11 C2' A B2491 -67.304 -75.341 -3.412 1.00 1.79 C
ATOM 12 O2' A B2491 -68.043 -76.239 -4.223 1.00 1.79 O
ATOM 13 C1' A B2491 -68.242 -74.636 -2.430 1.00 1.79 C
ATOM 14 N9 A B2491 -68.764 -73.392 -2.982 1.00 3.80 N
ATOM 15 C8 A B2491 -68.057 -72.377 -3.551 1.00 3.80 C
ATOM 16 N7 A B2491 -68.810 -71.423 -4.041 1.00 3.80 N
ATOM 17 C5 A B2491 -70.094 -71.838 -3.758 1.00 3.80 C
ATOM 18 C6 A B2491 -71.341 -71.283 -4.046 1.00 3.80 C
ATOM 19 N6 A B2491 -71.509 -70.169 -4.750 1.00 3.80 N
ATOM 20 N1 A B2491 -72.433 -71.923 -3.603 1.00 3.80 N
ATOM 21 C2 A B2491 -72.262 -73.064 -2.941 1.00 3.80 C
ATOM 22 N3 A B2491 -71.135 -73.705 -2.635 1.00 3.80 N
ATOM 23 C4 A B2491 -70.078 -73.029 -3.079 1.00 3.80 C
ATOM 24 P U B2492 -65.958 -78.634 -1.932 1.00 22.99 P
ATOM 25 OP1 U B2492 -64.528 -78.254 -1.765 1.00 18.44 O
ATOM 26 OP2 U B2492 -66.327 -79.606 -2.989 1.00 18.44 O
ATOM 27 O5' U B2492 -66.515 -79.189 -0.550 1.00 4.34 O
TER
ATOM 2 P A A1967 -69.220 -67.489 -10.756 1.00 2.13 P
ATOM 3 OP1 A A1967 -68.149 -66.476 -10.860 1.00 2.13 O
ATOM 4 OP2 A A1967 -69.320 -68.320 -9.552 1.00 2.13 O
ATOM 5 O5' A A1967 -70.649 -66.826 -10.892 1.00 1.23 O
ATOM 6 C5' A A1967 -71.453 -66.637 -9.717 1.00 1.23 C
ATOM 7 C4' A A1967 -72.527 -67.679 -9.659 1.00 1.23 C
ATOM 8 O4' A A1967 -71.908 -68.981 -9.629 1.00 1.23 O
ATOM 9 C3' A A1967 -73.474 -67.613 -8.468 1.00 1.23 C
ATOM 10 O3' A A1967 -74.755 -67.979 -8.911 1.00 1.23 O
ATOM 11 C2' A A1967 -72.984 -68.726 -7.553 1.00 1.23 C
ATOM 12 O2' A A1967 -74.055 -69.277 -6.797 1.00 1.23 O
ATOM 13 C1' A A1967 -72.459 -69.737 -8.573 1.00 1.23 C
ATOM 14 N9 A A1967 -71.441 -70.668 -8.080 1.00 9.79 N
ATOM 15 C8 A A1967 -70.085 -70.606 -8.250 1.00 9.79 C
ATOM 16 N7 A A1967 -69.440 -71.619 -7.733 1.00 9.79 N
ATOM 17 C5 A A1967 -70.437 -72.399 -7.167 1.00 9.79 C
ATOM 18 C6 A A1967 -70.399 -73.604 -6.463 1.00 9.79 C
ATOM 19 N6 A A1967 -69.281 -74.250 -6.169 1.00 9.79 N
ATOM 20 N1 A A1967 -71.565 -74.124 -6.055 1.00 9.79 N
ATOM 21 C2 A A1967 -72.692 -73.455 -6.314 1.00 9.79 C
ATOM 22 N3 A A1967 -72.859 -72.303 -6.946 1.00 9.79 N
ATOM 23 C4 A A1967 -71.675 -71.822 -7.364 1.00 9.79 C
ATOM 24 P G A1968 -75.979 -66.989 -8.684 1.00 0.79 P
ATOM 25 OP1 G A1968 -76.205 -66.327 -10.001 1.00 4.17 O
ATOM 26 OP2 G A1968 -75.735 -66.184 -7.454 1.00 4.17 O
ATOM 27 O5' G A1968 -77.221 -67.922 -8.399 1.00 0.92 O
TER
ATOM 1 O3' U B2490 -62.632 -72.875 -1.589 1.00 8.65 O
ATOM 2 P A B2491 -63.408 -73.255 -2.938 1.00 10.42 P
ATOM 3 OP1 A B2491 -62.726 -74.479 -3.411 1.00 15.27 O
ATOM 4 OP2 A B2491 -63.491 -72.061 -3.824 1.00 15.27 O
ATOM 5 O5' A B2491 -64.878 -73.626 -2.469 1.00 1.79 O
ATOM 6 C5' A B2491 -65.081 -74.262 -1.212 1.00 1.79 C
ATOM 7 C4' A B2491 -66.290 -75.145 -1.275 1.00 1.79 C
ATOM 8 O4' A B2491 -67.478 -74.321 -1.306 1.00 1.79 O
ATOM 9 C3' A B2491 -66.341 -76.068 -2.483 1.00 1.79 C
ATOM 10 O3' A B2491 -66.905 -77.332 -2.117 1.00 1.79 O
ATOM 11 C2' A B2491 -67.304 -75.341 -3.412 1.00 1.79 C
ATOM 12 O2' A B2491 -68.043 -76.239 -4.223 1.00 1.79 O
ATOM 13 C1' A B2491 -68.242 -74.636 -2.430 1.00 1.79 C
ATOM 14 N9 A B2491 -68.764 -73.392 -2.982 1.00 3.80 N
ATOM 15 C8 A B2491 -68.057 -72.377 -3.551 1.00 3.80 C
ATOM 16 N7 A B2491 -68.810 -71.423 -4.041 1.00 3.80 N
ATOM 17 C5 A B2491 -70.094 -71.838 -3.758 1.00 3.80 C
ATOM 18 C6 A B2491 -71.341 -71.283 -4.046 1.00 3.80 C
ATOM 19 N6 A B2491 -71.509 -70.169 -4.750 1.00 3.80 N
ATOM 20 N1 A B2491 -72.433 -71.923 -3.603 1.00 3.80 N
ATOM 21 C2 A B2491 -72.262 -73.064 -2.941 1.00 3.80 C
ATOM 22 N3 A B2491 -71.135 -73.705 -2.635 1.00 3.80 N
ATOM 23 C4 A B2491 -70.078 -73.029 -3.079 1.00 3.80 C
ATOM 24 P U B2492 -65.958 -78.634 -1.932 1.00 22.99 P
ATOM 25 OP1 U B2492 -64.528 -78.254 -1.765 1.00 18.44 O
ATOM 26 OP2 U B2492 -66.327 -79.606 -2.989 1.00 18.44 O
ATOM 27 O5' U B2492 -66.515 -79.189 -0.550 1.00 4.34 O
TER
Atoms:
OP1: (-68.149,-66.476,-10.860)
OP2: (-69.320,-68.320,-9.552)
C3': (-73.474,-67.613,-8.468)
C1': (-72.459,-69.737,-8.573)
C5': (-71.453,-66.637,-9.717)
O4': (-71.908,-68.981,-9.629)
C8: (-70.085,-70.606,-8.250)
O2': (-74.055,-69.277,-6.797)
C6: (-70.399,-73.604,-6.463)
C5: (-70.437,-72.399,-7.167)
C4: (-71.675,-71.822,-7.364)
P: (-69.220,-67.489,-10.756)
C4': (-72.527,-67.679,-9.659)
C2': (-72.984,-68.726,-7.553)
C2: (-72.692,-73.455,-6.314)
N1: (-71.565,-74.124,-6.055)
N3: (-72.859,-72.303,-6.946)
N6: (-69.281,-74.250,-6.169)
N7: (-69.440,-71.619,-7.733)
N9: (-71.441,-70.668,-8.080)
O5': (-70.649,-66.826,-10.892)
O3': (-74.755,-67.979,-8.911)
OP2: (-69.320,-68.320,-9.552)
C3': (-73.474,-67.613,-8.468)
C1': (-72.459,-69.737,-8.573)
C5': (-71.453,-66.637,-9.717)
O4': (-71.908,-68.981,-9.629)
C8: (-70.085,-70.606,-8.250)
O2': (-74.055,-69.277,-6.797)
C6: (-70.399,-73.604,-6.463)
C5: (-70.437,-72.399,-7.167)
C4: (-71.675,-71.822,-7.364)
P: (-69.220,-67.489,-10.756)
C4': (-72.527,-67.679,-9.659)
C2': (-72.984,-68.726,-7.553)
C2: (-72.692,-73.455,-6.314)
N1: (-71.565,-74.124,-6.055)
N3: (-72.859,-72.303,-6.946)
N6: (-69.281,-74.250,-6.169)
N7: (-69.440,-71.619,-7.733)
N9: (-71.441,-70.668,-8.080)
O5': (-70.649,-66.826,-10.892)
O3': (-74.755,-67.979,-8.911)
OP1: (-62.726,-74.479,-3.411)
OP2: (-63.491,-72.061,-3.824)
C3': (-66.341,-76.068,-2.483)
C1': (-68.242,-74.636,-2.430)
C5': (-65.081,-74.262,-1.212)
O4': (-67.478,-74.321,-1.306)
C8: (-68.057,-72.377,-3.551)
O2': (-68.043,-76.239,-4.223)
C6: (-71.341,-71.283,-4.046)
C5: (-70.094,-71.838,-3.758)
C4: (-70.078,-73.029,-3.079)
P: (-63.408,-73.255,-2.938)
C4': (-66.290,-75.145,-1.275)
C2': (-67.304,-75.341,-3.412)
C2: (-72.262,-73.064,-2.941)
N1: (-72.433,-71.923,-3.603)
N3: (-71.135,-73.705,-2.635)
N6: (-71.509,-70.169,-4.750)
N7: (-68.810,-71.423,-4.041)
N9: (-68.764,-73.392,-2.982)
O5': (-64.878,-73.626,-2.469)
O3': (-66.905,-77.332,-2.117)
OP2: (-63.491,-72.061,-3.824)
C3': (-66.341,-76.068,-2.483)
C1': (-68.242,-74.636,-2.430)
C5': (-65.081,-74.262,-1.212)
O4': (-67.478,-74.321,-1.306)
C8: (-68.057,-72.377,-3.551)
O2': (-68.043,-76.239,-4.223)
C6: (-71.341,-71.283,-4.046)
C5: (-70.094,-71.838,-3.758)
C4: (-70.078,-73.029,-3.079)
P: (-63.408,-73.255,-2.938)
C4': (-66.290,-75.145,-1.275)
C2': (-67.304,-75.341,-3.412)
C2: (-72.262,-73.064,-2.941)
N1: (-72.433,-71.923,-3.603)
N3: (-71.135,-73.705,-2.635)
N6: (-71.509,-70.169,-4.750)
N7: (-68.810,-71.423,-4.041)
N9: (-68.764,-73.392,-2.982)
O5': (-64.878,-73.626,-2.469)
O3': (-66.905,-77.332,-2.117)
Image (generated by PyMOL):