Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1894:A1698
Extra
PDB:
ATOM 1 O3' A A1893 -4.272 104.961 125.249 1.00 0.79 O
ATOM 2 P A A1894 -3.918 104.844 126.799 1.00 14.96 P
ATOM 3 OP1 A A1894 -2.926 103.755 126.902 1.00 21.48 O
ATOM 4 OP2 A A1894 -5.203 104.763 127.550 1.00 21.48 O
ATOM 5 O5' A A1894 -3.147 106.192 127.140 1.00 18.34 O
ATOM 6 C5' A A1894 -1.785 106.342 126.736 1.00 18.34 C
ATOM 7 C4' A A1894 -1.242 107.679 127.161 1.00 18.34 C
ATOM 8 O4' A A1894 -1.964 108.738 126.482 1.00 18.34 O
ATOM 9 C3' A A1894 -1.339 108.047 128.628 1.00 18.34 C
ATOM 10 O3' A A1894 -0.312 107.474 129.420 1.00 18.34 O
ATOM 11 C2' A A1894 -1.212 109.562 128.572 1.00 18.34 C
ATOM 12 O2' A A1894 0.144 109.960 128.413 1.00 18.34 O
ATOM 13 C1' A A1894 -2.005 109.887 127.306 1.00 18.34 C
ATOM 14 N9 A A1894 -3.401 110.160 127.628 1.00 0.79 N
ATOM 15 C8 A A1894 -4.463 109.311 127.520 1.00 0.79 C
ATOM 16 N7 A A1894 -5.599 109.831 127.911 1.00 0.79 N
ATOM 17 C5 A A1894 -5.256 111.113 128.307 1.00 0.79 C
ATOM 18 C6 A A1894 -6.010 112.172 128.832 1.00 0.79 C
ATOM 19 N6 A A1894 -7.313 112.097 129.086 1.00 0.79 N
ATOM 20 N1 A A1894 -5.373 113.320 129.096 1.00 0.79 N
ATOM 21 C2 A A1894 -4.064 113.389 128.864 1.00 0.79 C
ATOM 22 N3 A A1894 -3.242 112.461 128.388 1.00 0.79 N
ATOM 23 C4 A A1894 -3.909 111.332 128.125 1.00 0.79 C
ATOM 24 P C A1895 -0.628 107.078 130.954 1.00 9.84 P
ATOM 25 OP1 C A1895 0.623 106.453 131.480 1.00 9.84 O
ATOM 26 OP2 C A1895 -1.934 106.366 131.065 1.00 9.84 O
ATOM 27 O5' C A1895 -0.822 108.467 131.702 1.00 27.57 O
TER
ATOM 1 O3' G B1697 -11.686 119.805 131.572 1.00 0.79 O
ATOM 2 P A B1698 -11.762 120.079 129.988 1.00 12.91 P
ATOM 3 OP1 A B1698 -11.174 121.440 129.813 1.00 12.91 O
ATOM 4 OP2 A B1698 -13.142 119.794 129.484 1.00 12.91 O
ATOM 5 O5' A B1698 -10.741 119.053 129.326 1.00 0.82 O
ATOM 6 C5' A B1698 -9.320 119.236 129.458 1.00 0.82 C
ATOM 7 C4' A B1698 -8.621 117.908 129.325 1.00 0.82 C
ATOM 8 O4' A B1698 -8.229 117.663 127.939 1.00 0.82 O
ATOM 9 C3' A B1698 -7.312 117.794 130.065 1.00 0.82 C
ATOM 10 O3' A B1698 -7.502 117.620 131.457 1.00 0.82 O
ATOM 11 C2' A B1698 -6.643 116.625 129.356 1.00 0.82 C
ATOM 12 O2' A B1698 -7.139 115.384 129.755 1.00 0.82 O
ATOM 13 C1' A B1698 -7.063 116.854 127.911 1.00 0.82 C
ATOM 14 N9 A B1698 -5.971 117.595 127.309 1.00 5.45 N
ATOM 15 C8 A B1698 -5.724 118.930 127.371 1.00 5.45 C
ATOM 16 N7 A B1698 -4.546 119.262 126.913 1.00 5.45 N
ATOM 17 C5 A B1698 -4.010 118.068 126.472 1.00 5.45 C
ATOM 18 C6 A B1698 -2.769 117.739 125.913 1.00 5.45 C
ATOM 19 N6 A B1698 -1.775 118.610 125.733 1.00 5.45 N
ATOM 20 N1 A B1698 -2.561 116.460 125.560 1.00 5.45 N
ATOM 21 C2 A B1698 -3.529 115.579 125.788 1.00 5.45 C
ATOM 22 N3 A B1698 -4.725 115.764 126.336 1.00 5.45 N
ATOM 23 C4 A B1698 -4.900 117.046 126.660 1.00 5.45 C
ATOM 24 P C B1699 -6.498 118.352 132.468 1.00 16.01 P
ATOM 25 OP1 C B1699 -6.746 117.905 133.875 1.00 18.98 O
ATOM 26 OP2 C B1699 -6.552 119.792 132.140 1.00 18.98 O
ATOM 27 O5' C B1699 -5.083 117.808 131.980 1.00 0.79 O
TER
ATOM 2 P A A1894 -3.918 104.844 126.799 1.00 14.96 P
ATOM 3 OP1 A A1894 -2.926 103.755 126.902 1.00 21.48 O
ATOM 4 OP2 A A1894 -5.203 104.763 127.550 1.00 21.48 O
ATOM 5 O5' A A1894 -3.147 106.192 127.140 1.00 18.34 O
ATOM 6 C5' A A1894 -1.785 106.342 126.736 1.00 18.34 C
ATOM 7 C4' A A1894 -1.242 107.679 127.161 1.00 18.34 C
ATOM 8 O4' A A1894 -1.964 108.738 126.482 1.00 18.34 O
ATOM 9 C3' A A1894 -1.339 108.047 128.628 1.00 18.34 C
ATOM 10 O3' A A1894 -0.312 107.474 129.420 1.00 18.34 O
ATOM 11 C2' A A1894 -1.212 109.562 128.572 1.00 18.34 C
ATOM 12 O2' A A1894 0.144 109.960 128.413 1.00 18.34 O
ATOM 13 C1' A A1894 -2.005 109.887 127.306 1.00 18.34 C
ATOM 14 N9 A A1894 -3.401 110.160 127.628 1.00 0.79 N
ATOM 15 C8 A A1894 -4.463 109.311 127.520 1.00 0.79 C
ATOM 16 N7 A A1894 -5.599 109.831 127.911 1.00 0.79 N
ATOM 17 C5 A A1894 -5.256 111.113 128.307 1.00 0.79 C
ATOM 18 C6 A A1894 -6.010 112.172 128.832 1.00 0.79 C
ATOM 19 N6 A A1894 -7.313 112.097 129.086 1.00 0.79 N
ATOM 20 N1 A A1894 -5.373 113.320 129.096 1.00 0.79 N
ATOM 21 C2 A A1894 -4.064 113.389 128.864 1.00 0.79 C
ATOM 22 N3 A A1894 -3.242 112.461 128.388 1.00 0.79 N
ATOM 23 C4 A A1894 -3.909 111.332 128.125 1.00 0.79 C
ATOM 24 P C A1895 -0.628 107.078 130.954 1.00 9.84 P
ATOM 25 OP1 C A1895 0.623 106.453 131.480 1.00 9.84 O
ATOM 26 OP2 C A1895 -1.934 106.366 131.065 1.00 9.84 O
ATOM 27 O5' C A1895 -0.822 108.467 131.702 1.00 27.57 O
TER
ATOM 1 O3' G B1697 -11.686 119.805 131.572 1.00 0.79 O
ATOM 2 P A B1698 -11.762 120.079 129.988 1.00 12.91 P
ATOM 3 OP1 A B1698 -11.174 121.440 129.813 1.00 12.91 O
ATOM 4 OP2 A B1698 -13.142 119.794 129.484 1.00 12.91 O
ATOM 5 O5' A B1698 -10.741 119.053 129.326 1.00 0.82 O
ATOM 6 C5' A B1698 -9.320 119.236 129.458 1.00 0.82 C
ATOM 7 C4' A B1698 -8.621 117.908 129.325 1.00 0.82 C
ATOM 8 O4' A B1698 -8.229 117.663 127.939 1.00 0.82 O
ATOM 9 C3' A B1698 -7.312 117.794 130.065 1.00 0.82 C
ATOM 10 O3' A B1698 -7.502 117.620 131.457 1.00 0.82 O
ATOM 11 C2' A B1698 -6.643 116.625 129.356 1.00 0.82 C
ATOM 12 O2' A B1698 -7.139 115.384 129.755 1.00 0.82 O
ATOM 13 C1' A B1698 -7.063 116.854 127.911 1.00 0.82 C
ATOM 14 N9 A B1698 -5.971 117.595 127.309 1.00 5.45 N
ATOM 15 C8 A B1698 -5.724 118.930 127.371 1.00 5.45 C
ATOM 16 N7 A B1698 -4.546 119.262 126.913 1.00 5.45 N
ATOM 17 C5 A B1698 -4.010 118.068 126.472 1.00 5.45 C
ATOM 18 C6 A B1698 -2.769 117.739 125.913 1.00 5.45 C
ATOM 19 N6 A B1698 -1.775 118.610 125.733 1.00 5.45 N
ATOM 20 N1 A B1698 -2.561 116.460 125.560 1.00 5.45 N
ATOM 21 C2 A B1698 -3.529 115.579 125.788 1.00 5.45 C
ATOM 22 N3 A B1698 -4.725 115.764 126.336 1.00 5.45 N
ATOM 23 C4 A B1698 -4.900 117.046 126.660 1.00 5.45 C
ATOM 24 P C B1699 -6.498 118.352 132.468 1.00 16.01 P
ATOM 25 OP1 C B1699 -6.746 117.905 133.875 1.00 18.98 O
ATOM 26 OP2 C B1699 -6.552 119.792 132.140 1.00 18.98 O
ATOM 27 O5' C B1699 -5.083 117.808 131.980 1.00 0.79 O
TER
Atoms:
OP1: (-2.926,103.755,126.902)
OP2: (-5.203,104.763,127.550)
C3': (-1.339,108.047,128.628)
C1': (-2.005,109.887,127.306)
C5': (-1.785,106.342,126.736)
O4': (-1.964,108.738,126.482)
C8: (-4.463,109.311,127.520)
O2': (0.144,109.960,128.413)
C6: (-6.010,112.172,128.832)
C5: (-5.256,111.113,128.307)
C4: (-3.909,111.332,128.125)
P: (-3.918,104.844,126.799)
C4': (-1.242,107.679,127.161)
C2': (-1.212,109.562,128.572)
C2: (-4.064,113.389,128.864)
N1: (-5.373,113.320,129.096)
N3: (-3.242,112.461,128.388)
N6: (-7.313,112.097,129.086)
N7: (-5.599,109.831,127.911)
N9: (-3.401,110.160,127.628)
O5': (-3.147,106.192,127.140)
O3': (-0.312,107.474,129.420)
OP2: (-5.203,104.763,127.550)
C3': (-1.339,108.047,128.628)
C1': (-2.005,109.887,127.306)
C5': (-1.785,106.342,126.736)
O4': (-1.964,108.738,126.482)
C8: (-4.463,109.311,127.520)
O2': (0.144,109.960,128.413)
C6: (-6.010,112.172,128.832)
C5: (-5.256,111.113,128.307)
C4: (-3.909,111.332,128.125)
P: (-3.918,104.844,126.799)
C4': (-1.242,107.679,127.161)
C2': (-1.212,109.562,128.572)
C2: (-4.064,113.389,128.864)
N1: (-5.373,113.320,129.096)
N3: (-3.242,112.461,128.388)
N6: (-7.313,112.097,129.086)
N7: (-5.599,109.831,127.911)
N9: (-3.401,110.160,127.628)
O5': (-3.147,106.192,127.140)
O3': (-0.312,107.474,129.420)
OP1: (-11.174,121.440,129.813)
OP2: (-13.142,119.794,129.484)
C3': (-7.312,117.794,130.065)
C1': (-7.063,116.854,127.911)
C5': (-9.320,119.236,129.458)
O4': (-8.229,117.663,127.939)
C8: (-5.724,118.930,127.371)
O2': (-7.139,115.384,129.755)
C6: (-2.769,117.739,125.913)
C5: (-4.010,118.068,126.472)
C4: (-4.900,117.046,126.660)
P: (-11.762,120.079,129.988)
C4': (-8.621,117.908,129.325)
C2': (-6.643,116.625,129.356)
C2: (-3.529,115.579,125.788)
N1: (-2.561,116.460,125.560)
N3: (-4.725,115.764,126.336)
N6: (-1.775,118.610,125.733)
N7: (-4.546,119.262,126.913)
N9: (-5.971,117.595,127.309)
O5': (-10.741,119.053,129.326)
O3': (-7.502,117.620,131.457)
OP2: (-13.142,119.794,129.484)
C3': (-7.312,117.794,130.065)
C1': (-7.063,116.854,127.911)
C5': (-9.320,119.236,129.458)
O4': (-8.229,117.663,127.939)
C8: (-5.724,118.930,127.371)
O2': (-7.139,115.384,129.755)
C6: (-2.769,117.739,125.913)
C5: (-4.010,118.068,126.472)
C4: (-4.900,117.046,126.660)
P: (-11.762,120.079,129.988)
C4': (-8.621,117.908,129.325)
C2': (-6.643,116.625,129.356)
C2: (-3.529,115.579,125.788)
N1: (-2.561,116.460,125.560)
N3: (-4.725,115.764,126.336)
N6: (-1.775,118.610,125.733)
N7: (-4.546,119.262,126.913)
N9: (-5.971,117.595,127.309)
O5': (-10.741,119.053,129.326)
O3': (-7.502,117.620,131.457)
Image (generated by PyMOL):