Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01898:01901
Extra
PDB:
ATOM 1 O3' U A1897 120.459 111.902 81.022 1.00 46.46 O
ATOM 2 P C A1898 120.117 111.907 82.585 1.00 48.48 P
ATOM 3 OP1 C A1898 120.631 113.180 83.157 1.00 50.03 O
ATOM 4 OP2 C A1898 120.533 110.611 83.179 1.00 47.70 O
ATOM 5 O5' C A1898 118.530 111.961 82.615 1.00 50.01 O
ATOM 6 C5' C A1898 117.815 113.106 82.120 1.00 49.59 C
ATOM 7 C4' C A1898 116.654 113.400 83.031 1.00 49.75 C
ATOM 8 O4' C A1898 115.854 112.199 83.145 1.00 50.63 O
ATOM 9 C3' C A1898 117.044 113.750 84.458 1.00 49.70 C
ATOM 10 O3' C A1898 117.242 115.159 84.547 1.00 50.13 O
ATOM 11 C2' C A1898 115.829 113.299 85.258 1.00 49.50 C
ATOM 12 O2' C A1898 114.794 114.255 85.223 1.00 48.49 O
ATOM 13 C1' C A1898 115.381 112.066 84.469 1.00 50.38 C
ATOM 14 N1 C A1898 115.810 110.749 84.964 1.00 51.37 N
ATOM 15 C2 C A1898 114.897 109.698 84.922 1.00 53.13 C
ATOM 16 O2 C A1898 113.746 109.920 84.517 1.00 53.96 O
ATOM 17 N3 C A1898 115.285 108.466 85.326 1.00 53.66 N
ATOM 18 C4 C A1898 116.525 108.271 85.770 1.00 52.25 C
ATOM 19 N4 C A1898 116.865 107.041 86.145 1.00 53.72 N
ATOM 20 C5 C A1898 117.471 109.329 85.845 1.00 52.13 C
ATOM 21 C6 C A1898 117.076 110.541 85.437 1.00 52.66 C
ATOM 22 P A A1899 118.046 115.792 85.785 1.00 49.11 P
ATOM 23 OP1 A A1899 119.446 115.973 85.324 1.00 52.39 O
ATOM 24 OP2 A A1899 117.773 115.028 87.029 1.00 47.38 O
ATOM 25 O5' A A1899 117.389 117.231 85.937 1.00 48.35 O
TER
ATOM 1 O3' A B1900 110.387 115.627 82.046 1.00 47.75 O
ATOM 2 P C B1901 109.512 115.366 83.381 1.00 45.33 P
ATOM 3 OP1 C B1901 108.631 116.549 83.544 1.00 44.49 O
ATOM 4 OP2 C B1901 110.387 114.952 84.496 1.00 44.80 O
ATOM 5 O5' C B1901 108.596 114.121 83.007 1.00 46.74 O
ATOM 6 C5' C B1901 107.561 114.240 82.011 1.00 49.00 C
ATOM 7 C4' C B1901 106.660 113.033 82.050 1.00 49.86 C
ATOM 8 O4' C B1901 107.339 111.873 81.512 1.00 50.38 O
ATOM 9 C3' C B1901 106.247 112.620 83.447 1.00 51.12 C
ATOM 10 O3' C B1901 105.150 113.411 83.876 1.00 51.61 O
ATOM 11 C2' C B1901 105.898 111.150 83.258 1.00 51.20 C
ATOM 12 O2' C B1901 104.621 110.990 82.675 1.00 53.24 O
ATOM 13 C1' C B1901 106.957 110.717 82.239 1.00 51.61 C
ATOM 14 N1 C B1901 108.174 110.107 82.814 1.00 53.83 N
ATOM 15 C2 C B1901 108.200 108.720 83.056 1.00 54.35 C
ATOM 16 O2 C B1901 107.197 108.039 82.791 1.00 54.77 O
ATOM 17 N3 C B1901 109.321 108.160 83.569 1.00 53.85 N
ATOM 18 C4 C B1901 110.385 108.921 83.837 1.00 53.56 C
ATOM 19 N4 C B1901 111.470 108.327 84.336 1.00 52.51 N
ATOM 20 C5 C B1901 110.386 110.325 83.605 1.00 53.54 C
ATOM 21 C6 C B1901 109.272 110.872 83.102 1.00 53.81 C
ATOM 22 P G B1902 104.917 113.664 85.439 1.00 55.69 P
ATOM 23 OP1 G B1902 103.520 114.128 85.584 1.00 58.13 O
ATOM 24 OP2 G B1902 106.031 114.484 85.997 1.00 55.50 O
ATOM 25 O5' G B1902 104.992 112.205 86.052 1.00 51.34 O
TER
ATOM 2 P C A1898 120.117 111.907 82.585 1.00 48.48 P
ATOM 3 OP1 C A1898 120.631 113.180 83.157 1.00 50.03 O
ATOM 4 OP2 C A1898 120.533 110.611 83.179 1.00 47.70 O
ATOM 5 O5' C A1898 118.530 111.961 82.615 1.00 50.01 O
ATOM 6 C5' C A1898 117.815 113.106 82.120 1.00 49.59 C
ATOM 7 C4' C A1898 116.654 113.400 83.031 1.00 49.75 C
ATOM 8 O4' C A1898 115.854 112.199 83.145 1.00 50.63 O
ATOM 9 C3' C A1898 117.044 113.750 84.458 1.00 49.70 C
ATOM 10 O3' C A1898 117.242 115.159 84.547 1.00 50.13 O
ATOM 11 C2' C A1898 115.829 113.299 85.258 1.00 49.50 C
ATOM 12 O2' C A1898 114.794 114.255 85.223 1.00 48.49 O
ATOM 13 C1' C A1898 115.381 112.066 84.469 1.00 50.38 C
ATOM 14 N1 C A1898 115.810 110.749 84.964 1.00 51.37 N
ATOM 15 C2 C A1898 114.897 109.698 84.922 1.00 53.13 C
ATOM 16 O2 C A1898 113.746 109.920 84.517 1.00 53.96 O
ATOM 17 N3 C A1898 115.285 108.466 85.326 1.00 53.66 N
ATOM 18 C4 C A1898 116.525 108.271 85.770 1.00 52.25 C
ATOM 19 N4 C A1898 116.865 107.041 86.145 1.00 53.72 N
ATOM 20 C5 C A1898 117.471 109.329 85.845 1.00 52.13 C
ATOM 21 C6 C A1898 117.076 110.541 85.437 1.00 52.66 C
ATOM 22 P A A1899 118.046 115.792 85.785 1.00 49.11 P
ATOM 23 OP1 A A1899 119.446 115.973 85.324 1.00 52.39 O
ATOM 24 OP2 A A1899 117.773 115.028 87.029 1.00 47.38 O
ATOM 25 O5' A A1899 117.389 117.231 85.937 1.00 48.35 O
TER
ATOM 1 O3' A B1900 110.387 115.627 82.046 1.00 47.75 O
ATOM 2 P C B1901 109.512 115.366 83.381 1.00 45.33 P
ATOM 3 OP1 C B1901 108.631 116.549 83.544 1.00 44.49 O
ATOM 4 OP2 C B1901 110.387 114.952 84.496 1.00 44.80 O
ATOM 5 O5' C B1901 108.596 114.121 83.007 1.00 46.74 O
ATOM 6 C5' C B1901 107.561 114.240 82.011 1.00 49.00 C
ATOM 7 C4' C B1901 106.660 113.033 82.050 1.00 49.86 C
ATOM 8 O4' C B1901 107.339 111.873 81.512 1.00 50.38 O
ATOM 9 C3' C B1901 106.247 112.620 83.447 1.00 51.12 C
ATOM 10 O3' C B1901 105.150 113.411 83.876 1.00 51.61 O
ATOM 11 C2' C B1901 105.898 111.150 83.258 1.00 51.20 C
ATOM 12 O2' C B1901 104.621 110.990 82.675 1.00 53.24 O
ATOM 13 C1' C B1901 106.957 110.717 82.239 1.00 51.61 C
ATOM 14 N1 C B1901 108.174 110.107 82.814 1.00 53.83 N
ATOM 15 C2 C B1901 108.200 108.720 83.056 1.00 54.35 C
ATOM 16 O2 C B1901 107.197 108.039 82.791 1.00 54.77 O
ATOM 17 N3 C B1901 109.321 108.160 83.569 1.00 53.85 N
ATOM 18 C4 C B1901 110.385 108.921 83.837 1.00 53.56 C
ATOM 19 N4 C B1901 111.470 108.327 84.336 1.00 52.51 N
ATOM 20 C5 C B1901 110.386 110.325 83.605 1.00 53.54 C
ATOM 21 C6 C B1901 109.272 110.872 83.102 1.00 53.81 C
ATOM 22 P G B1902 104.917 113.664 85.439 1.00 55.69 P
ATOM 23 OP1 G B1902 103.520 114.128 85.584 1.00 58.13 O
ATOM 24 OP2 G B1902 106.031 114.484 85.997 1.00 55.50 O
ATOM 25 O5' G B1902 104.992 112.205 86.052 1.00 51.34 O
TER
Atoms:
C2: (114.897,109.698,84.922)
OP1: (120.631,113.180,83.157)
OP2: (120.533,110.611,83.179)
C4: (116.525,108.271,85.770)
O5': (118.530,111.961,82.615)
C3': (117.044,113.750,84.458)
C1': (115.381,112.066,84.469)
O4': (115.854,112.199,83.145)
C5': (117.815,113.106,82.120)
P: (120.117,111.907,82.585)
O2: (113.746,109.920,84.517)
C4': (116.654,113.400,83.031)
C2': (115.829,113.299,85.258)
O2': (114.794,114.255,85.223)
N1: (115.810,110.749,84.964)
N3: (115.285,108.466,85.326)
N4: (116.865,107.041,86.145)
C6: (117.076,110.541,85.437)
C5: (117.471,109.329,85.845)
O3': (117.242,115.159,84.547)
OP1: (120.631,113.180,83.157)
OP2: (120.533,110.611,83.179)
C4: (116.525,108.271,85.770)
O5': (118.530,111.961,82.615)
C3': (117.044,113.750,84.458)
C1': (115.381,112.066,84.469)
O4': (115.854,112.199,83.145)
C5': (117.815,113.106,82.120)
P: (120.117,111.907,82.585)
O2: (113.746,109.920,84.517)
C4': (116.654,113.400,83.031)
C2': (115.829,113.299,85.258)
O2': (114.794,114.255,85.223)
N1: (115.810,110.749,84.964)
N3: (115.285,108.466,85.326)
N4: (116.865,107.041,86.145)
C6: (117.076,110.541,85.437)
C5: (117.471,109.329,85.845)
O3': (117.242,115.159,84.547)
C2: (108.200,108.720,83.056)
OP1: (108.631,116.549,83.544)
OP2: (110.387,114.952,84.496)
C4: (110.385,108.921,83.837)
O5': (108.596,114.121,83.007)
C3': (106.247,112.620,83.447)
C1': (106.957,110.717,82.239)
O4': (107.339,111.873,81.512)
C5': (107.561,114.240,82.011)
P: (109.512,115.366,83.381)
O2: (107.197,108.039,82.791)
C4': (106.660,113.033,82.050)
C2': (105.898,111.150,83.258)
O2': (104.621,110.990,82.675)
N1: (108.174,110.107,82.814)
N3: (109.321,108.160,83.569)
N4: (111.470,108.327,84.336)
C6: (109.272,110.872,83.102)
C5: (110.386,110.325,83.605)
O3': (105.150,113.411,83.876)
OP1: (108.631,116.549,83.544)
OP2: (110.387,114.952,84.496)
C4: (110.385,108.921,83.837)
O5': (108.596,114.121,83.007)
C3': (106.247,112.620,83.447)
C1': (106.957,110.717,82.239)
O4': (107.339,111.873,81.512)
C5': (107.561,114.240,82.011)
P: (109.512,115.366,83.381)
O2: (107.197,108.039,82.791)
C4': (106.660,113.033,82.050)
C2': (105.898,111.150,83.258)
O2': (104.621,110.990,82.675)
N1: (108.174,110.107,82.814)
N3: (109.321,108.160,83.569)
N4: (111.470,108.327,84.336)
C6: (109.272,110.872,83.102)
C5: (110.386,110.325,83.605)
O3': (105.150,113.411,83.876)
Image (generated by PyMOL):