Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:9112:914
Extra
PDB:
ATOM 1 O3' U A 111 49.708 34.062 113.696 1.00 57.02 O
ATOM 2 P C A 112 50.126 32.571 114.102 1.00 56.53 P
ATOM 3 OP1 C A 112 50.029 31.754 112.870 1.00 56.67 O
ATOM 4 OP2 C A 112 49.348 32.183 115.305 1.00 58.36 O
ATOM 5 O5' C A 112 51.658 32.687 114.515 1.00 53.97 O
ATOM 6 C5' C A 112 52.623 33.186 113.583 1.00 52.95 C
ATOM 7 C4' C A 112 53.909 32.403 113.677 1.00 51.65 C
ATOM 8 O4' C A 112 54.703 32.862 114.805 1.00 52.82 O
ATOM 9 C3' C A 112 53.760 30.897 113.849 1.00 52.04 C
ATOM 10 O3' C A 112 54.720 30.254 113.039 1.00 52.52 O
ATOM 11 C2' C A 112 54.126 30.687 115.315 1.00 52.15 C
ATOM 12 O2' C A 112 54.642 29.399 115.588 1.00 53.48 O
ATOM 13 C1' C A 112 55.214 31.741 115.484 1.00 51.55 C
ATOM 14 N1 C A 112 55.578 32.124 116.865 1.00 50.34 N
ATOM 15 C2 C A 112 56.848 32.695 117.093 1.00 49.70 C
ATOM 16 O2 C A 112 57.609 32.893 116.126 1.00 47.44 O
ATOM 17 N3 C A 112 57.212 33.014 118.361 1.00 49.52 N
ATOM 18 C4 C A 112 56.373 32.785 119.376 1.00 47.88 C
ATOM 19 N4 C A 112 56.783 33.100 120.604 1.00 46.57 N
ATOM 20 C5 C A 112 55.076 32.222 119.174 1.00 47.94 C
ATOM 21 C6 C A 112 54.720 31.915 117.915 1.00 49.87 C
ATOM 22 P G A 113 54.240 29.480 111.724 1.00 55.95 P
ATOM 23 OP1 G A 113 53.250 28.444 112.122 1.00 56.10 O
ATOM 24 OP2 G A 113 55.450 29.089 110.949 1.00 55.72 O
ATOM 25 O5' G A 113 53.453 30.598 110.913 1.00 55.83 O
TER
ATOM 1 O3' G B 13 63.144 35.364 109.914 1.00 50.81 O
ATOM 2 P C B 14 63.877 34.269 110.835 1.00 52.12 P
ATOM 3 OP1 C B 14 65.163 33.890 110.203 1.00 52.80 O
ATOM 4 OP2 C B 14 62.864 33.225 111.132 1.00 52.89 O
ATOM 5 O5' C B 14 64.213 35.048 112.183 1.00 51.81 O
ATOM 6 C5' C B 14 65.326 35.947 112.264 1.00 49.95 C
ATOM 7 C4' C B 14 65.646 36.254 113.708 1.00 52.00 C
ATOM 8 O4' C B 14 64.494 36.880 114.331 1.00 52.44 O
ATOM 9 C3' C B 14 65.897 35.068 114.624 1.00 53.09 C
ATOM 10 O3' C B 14 67.194 34.506 114.489 1.00 55.37 O
ATOM 11 C2' C B 14 65.694 35.687 115.997 1.00 52.08 C
ATOM 12 O2' C B 14 66.790 36.460 116.424 1.00 53.70 O
ATOM 13 C1' C B 14 64.515 36.616 115.727 1.00 51.17 C
ATOM 14 N1 C B 14 63.237 36.012 116.143 1.00 50.96 N
ATOM 15 C2 C B 14 62.912 36.034 117.505 1.00 51.12 C
ATOM 16 O2 C B 14 63.711 36.553 118.302 1.00 54.12 O
ATOM 17 N3 C B 14 61.749 35.489 117.920 1.00 50.43 N
ATOM 18 C4 C B 14 60.923 34.931 117.035 1.00 51.09 C
ATOM 19 N4 C B 14 59.784 34.406 117.494 1.00 50.37 N
ATOM 20 C5 C B 14 61.228 34.889 115.639 1.00 50.07 C
ATOM 21 C6 C B 14 62.384 35.439 115.241 1.00 50.11 C
ATOM 22 P G B 15 67.396 32.924 114.716 1.00 57.55 P
ATOM 23 OP1 G B 15 68.859 32.641 114.632 1.00 55.07 O
ATOM 24 OP2 G B 15 66.456 32.199 113.817 1.00 55.75 O
ATOM 25 O5' G B 15 66.917 32.700 116.219 1.00 57.79 O
TER
ATOM 2 P C A 112 50.126 32.571 114.102 1.00 56.53 P
ATOM 3 OP1 C A 112 50.029 31.754 112.870 1.00 56.67 O
ATOM 4 OP2 C A 112 49.348 32.183 115.305 1.00 58.36 O
ATOM 5 O5' C A 112 51.658 32.687 114.515 1.00 53.97 O
ATOM 6 C5' C A 112 52.623 33.186 113.583 1.00 52.95 C
ATOM 7 C4' C A 112 53.909 32.403 113.677 1.00 51.65 C
ATOM 8 O4' C A 112 54.703 32.862 114.805 1.00 52.82 O
ATOM 9 C3' C A 112 53.760 30.897 113.849 1.00 52.04 C
ATOM 10 O3' C A 112 54.720 30.254 113.039 1.00 52.52 O
ATOM 11 C2' C A 112 54.126 30.687 115.315 1.00 52.15 C
ATOM 12 O2' C A 112 54.642 29.399 115.588 1.00 53.48 O
ATOM 13 C1' C A 112 55.214 31.741 115.484 1.00 51.55 C
ATOM 14 N1 C A 112 55.578 32.124 116.865 1.00 50.34 N
ATOM 15 C2 C A 112 56.848 32.695 117.093 1.00 49.70 C
ATOM 16 O2 C A 112 57.609 32.893 116.126 1.00 47.44 O
ATOM 17 N3 C A 112 57.212 33.014 118.361 1.00 49.52 N
ATOM 18 C4 C A 112 56.373 32.785 119.376 1.00 47.88 C
ATOM 19 N4 C A 112 56.783 33.100 120.604 1.00 46.57 N
ATOM 20 C5 C A 112 55.076 32.222 119.174 1.00 47.94 C
ATOM 21 C6 C A 112 54.720 31.915 117.915 1.00 49.87 C
ATOM 22 P G A 113 54.240 29.480 111.724 1.00 55.95 P
ATOM 23 OP1 G A 113 53.250 28.444 112.122 1.00 56.10 O
ATOM 24 OP2 G A 113 55.450 29.089 110.949 1.00 55.72 O
ATOM 25 O5' G A 113 53.453 30.598 110.913 1.00 55.83 O
TER
ATOM 1 O3' G B 13 63.144 35.364 109.914 1.00 50.81 O
ATOM 2 P C B 14 63.877 34.269 110.835 1.00 52.12 P
ATOM 3 OP1 C B 14 65.163 33.890 110.203 1.00 52.80 O
ATOM 4 OP2 C B 14 62.864 33.225 111.132 1.00 52.89 O
ATOM 5 O5' C B 14 64.213 35.048 112.183 1.00 51.81 O
ATOM 6 C5' C B 14 65.326 35.947 112.264 1.00 49.95 C
ATOM 7 C4' C B 14 65.646 36.254 113.708 1.00 52.00 C
ATOM 8 O4' C B 14 64.494 36.880 114.331 1.00 52.44 O
ATOM 9 C3' C B 14 65.897 35.068 114.624 1.00 53.09 C
ATOM 10 O3' C B 14 67.194 34.506 114.489 1.00 55.37 O
ATOM 11 C2' C B 14 65.694 35.687 115.997 1.00 52.08 C
ATOM 12 O2' C B 14 66.790 36.460 116.424 1.00 53.70 O
ATOM 13 C1' C B 14 64.515 36.616 115.727 1.00 51.17 C
ATOM 14 N1 C B 14 63.237 36.012 116.143 1.00 50.96 N
ATOM 15 C2 C B 14 62.912 36.034 117.505 1.00 51.12 C
ATOM 16 O2 C B 14 63.711 36.553 118.302 1.00 54.12 O
ATOM 17 N3 C B 14 61.749 35.489 117.920 1.00 50.43 N
ATOM 18 C4 C B 14 60.923 34.931 117.035 1.00 51.09 C
ATOM 19 N4 C B 14 59.784 34.406 117.494 1.00 50.37 N
ATOM 20 C5 C B 14 61.228 34.889 115.639 1.00 50.07 C
ATOM 21 C6 C B 14 62.384 35.439 115.241 1.00 50.11 C
ATOM 22 P G B 15 67.396 32.924 114.716 1.00 57.55 P
ATOM 23 OP1 G B 15 68.859 32.641 114.632 1.00 55.07 O
ATOM 24 OP2 G B 15 66.456 32.199 113.817 1.00 55.75 O
ATOM 25 O5' G B 15 66.917 32.700 116.219 1.00 57.79 O
TER
Atoms:
C2: (56.848,32.695,117.093)
OP1: (50.029,31.754,112.870)
OP2: (49.348,32.183,115.305)
C4: (56.373,32.785,119.376)
O5': (51.658,32.687,114.515)
C3': (53.760,30.897,113.849)
C1': (55.214,31.741,115.484)
O4': (54.703,32.862,114.805)
C5': (52.623,33.186,113.583)
P: (50.126,32.571,114.102)
O2: (57.609,32.893,116.126)
C4': (53.909,32.403,113.677)
C2': (54.126,30.687,115.315)
O2': (54.642,29.399,115.588)
N1: (55.578,32.124,116.865)
N3: (57.212,33.014,118.361)
N4: (56.783,33.100,120.604)
C6: (54.720,31.915,117.915)
C5: (55.076,32.222,119.174)
O3': (54.720,30.254,113.039)
OP1: (50.029,31.754,112.870)
OP2: (49.348,32.183,115.305)
C4: (56.373,32.785,119.376)
O5': (51.658,32.687,114.515)
C3': (53.760,30.897,113.849)
C1': (55.214,31.741,115.484)
O4': (54.703,32.862,114.805)
C5': (52.623,33.186,113.583)
P: (50.126,32.571,114.102)
O2: (57.609,32.893,116.126)
C4': (53.909,32.403,113.677)
C2': (54.126,30.687,115.315)
O2': (54.642,29.399,115.588)
N1: (55.578,32.124,116.865)
N3: (57.212,33.014,118.361)
N4: (56.783,33.100,120.604)
C6: (54.720,31.915,117.915)
C5: (55.076,32.222,119.174)
O3': (54.720,30.254,113.039)
C2: (62.912,36.034,117.505)
OP1: (65.163,33.890,110.203)
OP2: (62.864,33.225,111.132)
C4: (60.923,34.931,117.035)
O5': (64.213,35.048,112.183)
C3': (65.897,35.068,114.624)
C1': (64.515,36.616,115.727)
O4': (64.494,36.880,114.331)
C5': (65.326,35.947,112.264)
P: (63.877,34.269,110.835)
O2: (63.711,36.553,118.302)
C4': (65.646,36.254,113.708)
C2': (65.694,35.687,115.997)
O2': (66.790,36.460,116.424)
N1: (63.237,36.012,116.143)
N3: (61.749,35.489,117.920)
N4: (59.784,34.406,117.494)
C6: (62.384,35.439,115.241)
C5: (61.228,34.889,115.639)
O3': (67.194,34.506,114.489)
OP1: (65.163,33.890,110.203)
OP2: (62.864,33.225,111.132)
C4: (60.923,34.931,117.035)
O5': (64.213,35.048,112.183)
C3': (65.897,35.068,114.624)
C1': (64.515,36.616,115.727)
O4': (64.494,36.880,114.331)
C5': (65.326,35.947,112.264)
P: (63.877,34.269,110.835)
O2: (63.711,36.553,118.302)
C4': (65.646,36.254,113.708)
C2': (65.694,35.687,115.997)
O2': (66.790,36.460,116.424)
N1: (63.237,36.012,116.143)
N3: (61.749,35.489,117.920)
N4: (59.784,34.406,117.494)
C6: (62.384,35.439,115.241)
C5: (61.228,34.889,115.639)
O3': (67.194,34.506,114.489)
Image (generated by PyMOL):