Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:9112:914
Extra
PDB:
ATOM 1 O3' U A 111 49.874 34.269 114.108 1.00 58.28 O
ATOM 2 P C A 112 50.354 32.784 114.472 1.00 59.91 P
ATOM 3 OP1 C A 112 50.337 31.978 113.229 1.00 59.20 O
ATOM 4 OP2 C A 112 49.591 32.323 115.657 1.00 58.98 O
ATOM 5 O5' C A 112 51.878 32.968 114.881 1.00 58.91 O
ATOM 6 C5' C A 112 52.828 33.379 113.903 1.00 60.05 C
ATOM 7 C4' C A 112 54.077 32.546 113.996 1.00 60.70 C
ATOM 8 O4' C A 112 54.872 32.990 115.127 1.00 62.13 O
ATOM 9 C3' C A 112 53.883 31.044 114.171 1.00 61.40 C
ATOM 10 O3' C A 112 54.851 30.369 113.387 1.00 64.37 O
ATOM 11 C2' C A 112 54.218 30.834 115.643 1.00 61.32 C
ATOM 12 O2' C A 112 54.724 29.544 115.914 1.00 62.23 O
ATOM 13 C1' C A 112 55.326 31.862 115.832 1.00 60.86 C
ATOM 14 N1 C A 112 55.648 32.253 117.217 1.00 60.23 N
ATOM 15 C2 C A 112 56.923 32.795 117.485 1.00 59.80 C
ATOM 16 O2 C A 112 57.727 32.953 116.549 1.00 57.45 O
ATOM 17 N3 C A 112 57.244 33.129 118.757 1.00 59.65 N
ATOM 18 C4 C A 112 56.359 32.942 119.740 1.00 59.46 C
ATOM 19 N4 C A 112 56.724 33.277 120.979 1.00 58.20 N
ATOM 20 C5 C A 112 55.059 32.403 119.496 1.00 59.22 C
ATOM 21 C6 C A 112 54.747 32.082 118.233 1.00 58.90 C
ATOM 22 P G A 113 54.390 29.603 112.056 1.00 66.53 P
ATOM 23 OP1 G A 113 53.709 28.336 112.447 1.00 66.06 O
ATOM 24 OP2 G A 113 55.561 29.559 111.130 1.00 66.83 O
ATOM 25 O5' G A 113 53.299 30.595 111.456 1.00 65.33 O
TER
ATOM 1 O3' G B 13 63.298 35.450 110.175 1.00 57.73 O
ATOM 2 P C B 14 64.046 34.346 111.076 1.00 59.28 P
ATOM 3 OP1 C B 14 65.342 34.037 110.420 1.00 61.26 O
ATOM 4 OP2 C B 14 63.084 33.248 111.357 1.00 57.60 O
ATOM 5 O5' C B 14 64.385 35.106 112.435 1.00 58.50 O
ATOM 6 C5' C B 14 65.498 36.003 112.513 1.00 58.09 C
ATOM 7 C4' C B 14 65.833 36.309 113.952 1.00 59.87 C
ATOM 8 O4' C B 14 64.707 36.973 114.579 1.00 61.56 O
ATOM 9 C3' C B 14 66.071 35.139 114.892 1.00 61.41 C
ATOM 10 O3' C B 14 67.344 34.520 114.731 1.00 64.57 O
ATOM 11 C2' C B 14 65.931 35.820 116.247 1.00 60.35 C
ATOM 12 O2' C B 14 67.033 36.628 116.593 1.00 61.87 O
ATOM 13 C1' C B 14 64.748 36.743 115.983 1.00 59.74 C
ATOM 14 N1 C B 14 63.488 36.120 116.428 1.00 58.48 N
ATOM 15 C2 C B 14 63.183 36.156 117.791 1.00 58.24 C
ATOM 16 O2 C B 14 63.966 36.733 118.567 1.00 60.01 O
ATOM 17 N3 C B 14 62.054 35.565 118.231 1.00 57.03 N
ATOM 18 C4 C B 14 61.243 34.956 117.368 1.00 57.02 C
ATOM 19 N4 C B 14 60.150 34.368 117.854 1.00 56.90 N
ATOM 20 C5 C B 14 61.519 34.917 115.971 1.00 56.33 C
ATOM 21 C6 C B 14 62.640 35.507 115.548 1.00 57.06 C
ATOM 22 P G B 15 67.491 32.927 114.950 1.00 64.84 P
ATOM 23 OP1 G B 15 68.935 32.602 114.808 1.00 64.24 O
ATOM 24 OP2 G B 15 66.492 32.231 114.087 1.00 63.58 O
ATOM 25 O5' G B 15 67.088 32.713 116.477 1.00 64.36 O
TER
ATOM 2 P C A 112 50.354 32.784 114.472 1.00 59.91 P
ATOM 3 OP1 C A 112 50.337 31.978 113.229 1.00 59.20 O
ATOM 4 OP2 C A 112 49.591 32.323 115.657 1.00 58.98 O
ATOM 5 O5' C A 112 51.878 32.968 114.881 1.00 58.91 O
ATOM 6 C5' C A 112 52.828 33.379 113.903 1.00 60.05 C
ATOM 7 C4' C A 112 54.077 32.546 113.996 1.00 60.70 C
ATOM 8 O4' C A 112 54.872 32.990 115.127 1.00 62.13 O
ATOM 9 C3' C A 112 53.883 31.044 114.171 1.00 61.40 C
ATOM 10 O3' C A 112 54.851 30.369 113.387 1.00 64.37 O
ATOM 11 C2' C A 112 54.218 30.834 115.643 1.00 61.32 C
ATOM 12 O2' C A 112 54.724 29.544 115.914 1.00 62.23 O
ATOM 13 C1' C A 112 55.326 31.862 115.832 1.00 60.86 C
ATOM 14 N1 C A 112 55.648 32.253 117.217 1.00 60.23 N
ATOM 15 C2 C A 112 56.923 32.795 117.485 1.00 59.80 C
ATOM 16 O2 C A 112 57.727 32.953 116.549 1.00 57.45 O
ATOM 17 N3 C A 112 57.244 33.129 118.757 1.00 59.65 N
ATOM 18 C4 C A 112 56.359 32.942 119.740 1.00 59.46 C
ATOM 19 N4 C A 112 56.724 33.277 120.979 1.00 58.20 N
ATOM 20 C5 C A 112 55.059 32.403 119.496 1.00 59.22 C
ATOM 21 C6 C A 112 54.747 32.082 118.233 1.00 58.90 C
ATOM 22 P G A 113 54.390 29.603 112.056 1.00 66.53 P
ATOM 23 OP1 G A 113 53.709 28.336 112.447 1.00 66.06 O
ATOM 24 OP2 G A 113 55.561 29.559 111.130 1.00 66.83 O
ATOM 25 O5' G A 113 53.299 30.595 111.456 1.00 65.33 O
TER
ATOM 1 O3' G B 13 63.298 35.450 110.175 1.00 57.73 O
ATOM 2 P C B 14 64.046 34.346 111.076 1.00 59.28 P
ATOM 3 OP1 C B 14 65.342 34.037 110.420 1.00 61.26 O
ATOM 4 OP2 C B 14 63.084 33.248 111.357 1.00 57.60 O
ATOM 5 O5' C B 14 64.385 35.106 112.435 1.00 58.50 O
ATOM 6 C5' C B 14 65.498 36.003 112.513 1.00 58.09 C
ATOM 7 C4' C B 14 65.833 36.309 113.952 1.00 59.87 C
ATOM 8 O4' C B 14 64.707 36.973 114.579 1.00 61.56 O
ATOM 9 C3' C B 14 66.071 35.139 114.892 1.00 61.41 C
ATOM 10 O3' C B 14 67.344 34.520 114.731 1.00 64.57 O
ATOM 11 C2' C B 14 65.931 35.820 116.247 1.00 60.35 C
ATOM 12 O2' C B 14 67.033 36.628 116.593 1.00 61.87 O
ATOM 13 C1' C B 14 64.748 36.743 115.983 1.00 59.74 C
ATOM 14 N1 C B 14 63.488 36.120 116.428 1.00 58.48 N
ATOM 15 C2 C B 14 63.183 36.156 117.791 1.00 58.24 C
ATOM 16 O2 C B 14 63.966 36.733 118.567 1.00 60.01 O
ATOM 17 N3 C B 14 62.054 35.565 118.231 1.00 57.03 N
ATOM 18 C4 C B 14 61.243 34.956 117.368 1.00 57.02 C
ATOM 19 N4 C B 14 60.150 34.368 117.854 1.00 56.90 N
ATOM 20 C5 C B 14 61.519 34.917 115.971 1.00 56.33 C
ATOM 21 C6 C B 14 62.640 35.507 115.548 1.00 57.06 C
ATOM 22 P G B 15 67.491 32.927 114.950 1.00 64.84 P
ATOM 23 OP1 G B 15 68.935 32.602 114.808 1.00 64.24 O
ATOM 24 OP2 G B 15 66.492 32.231 114.087 1.00 63.58 O
ATOM 25 O5' G B 15 67.088 32.713 116.477 1.00 64.36 O
TER
Atoms:
C2: (56.923,32.795,117.485)
OP1: (50.337,31.978,113.229)
OP2: (49.591,32.323,115.657)
C4: (56.359,32.942,119.740)
O5': (51.878,32.968,114.881)
C3': (53.883,31.044,114.171)
C1': (55.326,31.862,115.832)
O4': (54.872,32.990,115.127)
C5': (52.828,33.379,113.903)
P: (50.354,32.784,114.472)
O2: (57.727,32.953,116.549)
C4': (54.077,32.546,113.996)
C2': (54.218,30.834,115.643)
O2': (54.724,29.544,115.914)
N1: (55.648,32.253,117.217)
N3: (57.244,33.129,118.757)
N4: (56.724,33.277,120.979)
C6: (54.747,32.082,118.233)
C5: (55.059,32.403,119.496)
O3': (54.851,30.369,113.387)
OP1: (50.337,31.978,113.229)
OP2: (49.591,32.323,115.657)
C4: (56.359,32.942,119.740)
O5': (51.878,32.968,114.881)
C3': (53.883,31.044,114.171)
C1': (55.326,31.862,115.832)
O4': (54.872,32.990,115.127)
C5': (52.828,33.379,113.903)
P: (50.354,32.784,114.472)
O2: (57.727,32.953,116.549)
C4': (54.077,32.546,113.996)
C2': (54.218,30.834,115.643)
O2': (54.724,29.544,115.914)
N1: (55.648,32.253,117.217)
N3: (57.244,33.129,118.757)
N4: (56.724,33.277,120.979)
C6: (54.747,32.082,118.233)
C5: (55.059,32.403,119.496)
O3': (54.851,30.369,113.387)
C2: (63.183,36.156,117.791)
OP1: (65.342,34.037,110.420)
OP2: (63.084,33.248,111.357)
C4: (61.243,34.956,117.368)
O5': (64.385,35.106,112.435)
C3': (66.071,35.139,114.892)
C1': (64.748,36.743,115.983)
O4': (64.707,36.973,114.579)
C5': (65.498,36.003,112.513)
P: (64.046,34.346,111.076)
O2: (63.966,36.733,118.567)
C4': (65.833,36.309,113.952)
C2': (65.931,35.820,116.247)
O2': (67.033,36.628,116.593)
N1: (63.488,36.120,116.428)
N3: (62.054,35.565,118.231)
N4: (60.150,34.368,117.854)
C6: (62.640,35.507,115.548)
C5: (61.519,34.917,115.971)
O3': (67.344,34.520,114.731)
OP1: (65.342,34.037,110.420)
OP2: (63.084,33.248,111.357)
C4: (61.243,34.956,117.368)
O5': (64.385,35.106,112.435)
C3': (66.071,35.139,114.892)
C1': (64.748,36.743,115.983)
O4': (64.707,36.973,114.579)
C5': (65.498,36.003,112.513)
P: (64.046,34.346,111.076)
O2: (63.966,36.733,118.567)
C4': (65.833,36.309,113.952)
C2': (65.931,35.820,116.247)
O2': (67.033,36.628,116.593)
N1: (63.488,36.120,116.428)
N3: (62.054,35.565,118.231)
N4: (60.150,34.368,117.854)
C6: (62.640,35.507,115.548)
C5: (61.519,34.917,115.971)
O3': (67.344,34.520,114.731)
Image (generated by PyMOL):