Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0250:0235
Extra
PDB:
ATOM 1 O3' A A 249 94.856 122.721 3.325 1.00 52.77 O
ATOM 2 P A A 250 96.434 122.733 3.645 1.00 55.75 P
ATOM 3 OP1 A A 250 96.626 122.652 5.106 1.00 58.49 O
ATOM 4 OP2 A A 250 97.069 123.848 2.889 1.00 58.21 O
ATOM 5 O5' A A 250 96.968 121.369 3.028 1.00 54.95 O
ATOM 6 C5' A A 250 96.608 120.972 1.693 1.00 52.98 C
ATOM 7 C4' A A 250 97.354 119.715 1.308 1.00 52.52 C
ATOM 8 O4' A A 250 96.908 119.276 -0.004 1.00 54.49 O
ATOM 9 C3' A A 250 98.866 119.865 1.203 1.00 51.82 C
ATOM 10 O3' A A 250 99.454 118.594 1.470 1.00 49.94 O
ATOM 11 C2' A A 250 99.047 120.219 -0.272 1.00 53.56 C
ATOM 12 O2' A A 250 100.333 119.908 -0.767 1.00 54.54 O
ATOM 13 C1' A A 250 97.993 119.317 -0.914 1.00 55.27 C
ATOM 14 N9 A A 250 97.485 119.759 -2.213 1.00 56.55 N
ATOM 15 C8 A A 250 97.600 119.098 -3.410 1.00 56.57 C
ATOM 16 N7 A A 250 97.015 119.710 -4.411 1.00 57.49 N
ATOM 17 C5 A A 250 96.483 120.856 -3.838 1.00 57.45 C
ATOM 18 C6 A A 250 95.734 121.922 -4.371 1.00 57.60 C
ATOM 19 N6 A A 250 95.369 122.008 -5.653 1.00 56.67 N
ATOM 20 N1 A A 250 95.363 122.909 -3.528 1.00 58.81 N
ATOM 21 C2 A A 250 95.720 122.821 -2.242 1.00 58.78 C
ATOM 22 N3 A A 250 96.419 121.870 -1.623 1.00 58.69 N
ATOM 23 C4 A A 250 96.774 120.905 -2.486 1.00 57.53 C
ATOM 24 P U A 251 100.567 118.442 2.617 1.00 51.92 P
ATOM 25 OP1 U A 251 101.366 119.697 2.706 1.00 50.80 O
ATOM 26 OP2 U A 251 101.266 117.137 2.405 1.00 47.60 O
ATOM 27 O5' U A 251 99.703 118.337 3.952 1.00 51.21 O
TER
ATOM 1 O3' G B 234 93.514 117.303 -8.176 1.00 68.45 O
ATOM 2 P A B 235 93.944 118.262 -9.390 1.00 68.55 P
ATOM 3 OP1 A B 235 93.409 117.665 -10.643 1.00 69.92 O
ATOM 4 OP2 A B 235 95.402 118.518 -9.269 1.00 67.58 O
ATOM 5 O5' A B 235 93.144 119.608 -9.108 1.00 67.23 O
ATOM 6 C5' A B 235 91.740 119.722 -9.429 1.00 64.45 C
ATOM 7 C4' A B 235 91.132 120.874 -8.666 1.00 65.25 C
ATOM 8 O4' A B 235 91.005 120.517 -7.257 1.00 64.00 O
ATOM 9 C3' A B 235 91.963 122.155 -8.699 1.00 64.58 C
ATOM 10 O3' A B 235 91.098 123.279 -8.611 1.00 66.77 O
ATOM 11 C2' A B 235 92.773 122.038 -7.413 1.00 63.15 C
ATOM 12 O2' A B 235 93.260 123.264 -6.914 1.00 63.26 O
ATOM 13 C1' A B 235 91.728 121.443 -6.473 1.00 62.66 C
ATOM 14 N9 A B 235 92.297 120.756 -5.315 1.00 60.06 N
ATOM 15 C8 A B 235 92.942 119.545 -5.265 1.00 60.18 C
ATOM 16 N7 A B 235 93.372 119.226 -4.071 1.00 57.72 N
ATOM 17 C5 A B 235 92.976 120.295 -3.278 1.00 58.23 C
ATOM 18 C6 A B 235 93.136 120.570 -1.906 1.00 55.39 C
ATOM 19 N6 A B 235 93.772 119.760 -1.058 1.00 53.12 N
ATOM 20 N1 A B 235 92.617 121.721 -1.433 1.00 53.66 N
ATOM 21 C2 A B 235 91.985 122.535 -2.280 1.00 55.78 C
ATOM 22 N3 A B 235 91.773 122.391 -3.586 1.00 58.67 N
ATOM 23 C4 A B 235 92.302 121.237 -4.029 1.00 58.34 C
ATOM 24 P A B 236 90.610 124.015 -9.949 1.00 67.17 P
ATOM 25 OP1 A B 236 91.692 123.865 -10.958 1.00 67.76 O
ATOM 26 OP2 A B 236 90.145 125.372 -9.563 1.00 68.37 O
ATOM 27 O5' A B 236 89.341 123.170 -10.418 1.00 65.49 O
TER
ATOM 2 P A A 250 96.434 122.733 3.645 1.00 55.75 P
ATOM 3 OP1 A A 250 96.626 122.652 5.106 1.00 58.49 O
ATOM 4 OP2 A A 250 97.069 123.848 2.889 1.00 58.21 O
ATOM 5 O5' A A 250 96.968 121.369 3.028 1.00 54.95 O
ATOM 6 C5' A A 250 96.608 120.972 1.693 1.00 52.98 C
ATOM 7 C4' A A 250 97.354 119.715 1.308 1.00 52.52 C
ATOM 8 O4' A A 250 96.908 119.276 -0.004 1.00 54.49 O
ATOM 9 C3' A A 250 98.866 119.865 1.203 1.00 51.82 C
ATOM 10 O3' A A 250 99.454 118.594 1.470 1.00 49.94 O
ATOM 11 C2' A A 250 99.047 120.219 -0.272 1.00 53.56 C
ATOM 12 O2' A A 250 100.333 119.908 -0.767 1.00 54.54 O
ATOM 13 C1' A A 250 97.993 119.317 -0.914 1.00 55.27 C
ATOM 14 N9 A A 250 97.485 119.759 -2.213 1.00 56.55 N
ATOM 15 C8 A A 250 97.600 119.098 -3.410 1.00 56.57 C
ATOM 16 N7 A A 250 97.015 119.710 -4.411 1.00 57.49 N
ATOM 17 C5 A A 250 96.483 120.856 -3.838 1.00 57.45 C
ATOM 18 C6 A A 250 95.734 121.922 -4.371 1.00 57.60 C
ATOM 19 N6 A A 250 95.369 122.008 -5.653 1.00 56.67 N
ATOM 20 N1 A A 250 95.363 122.909 -3.528 1.00 58.81 N
ATOM 21 C2 A A 250 95.720 122.821 -2.242 1.00 58.78 C
ATOM 22 N3 A A 250 96.419 121.870 -1.623 1.00 58.69 N
ATOM 23 C4 A A 250 96.774 120.905 -2.486 1.00 57.53 C
ATOM 24 P U A 251 100.567 118.442 2.617 1.00 51.92 P
ATOM 25 OP1 U A 251 101.366 119.697 2.706 1.00 50.80 O
ATOM 26 OP2 U A 251 101.266 117.137 2.405 1.00 47.60 O
ATOM 27 O5' U A 251 99.703 118.337 3.952 1.00 51.21 O
TER
ATOM 1 O3' G B 234 93.514 117.303 -8.176 1.00 68.45 O
ATOM 2 P A B 235 93.944 118.262 -9.390 1.00 68.55 P
ATOM 3 OP1 A B 235 93.409 117.665 -10.643 1.00 69.92 O
ATOM 4 OP2 A B 235 95.402 118.518 -9.269 1.00 67.58 O
ATOM 5 O5' A B 235 93.144 119.608 -9.108 1.00 67.23 O
ATOM 6 C5' A B 235 91.740 119.722 -9.429 1.00 64.45 C
ATOM 7 C4' A B 235 91.132 120.874 -8.666 1.00 65.25 C
ATOM 8 O4' A B 235 91.005 120.517 -7.257 1.00 64.00 O
ATOM 9 C3' A B 235 91.963 122.155 -8.699 1.00 64.58 C
ATOM 10 O3' A B 235 91.098 123.279 -8.611 1.00 66.77 O
ATOM 11 C2' A B 235 92.773 122.038 -7.413 1.00 63.15 C
ATOM 12 O2' A B 235 93.260 123.264 -6.914 1.00 63.26 O
ATOM 13 C1' A B 235 91.728 121.443 -6.473 1.00 62.66 C
ATOM 14 N9 A B 235 92.297 120.756 -5.315 1.00 60.06 N
ATOM 15 C8 A B 235 92.942 119.545 -5.265 1.00 60.18 C
ATOM 16 N7 A B 235 93.372 119.226 -4.071 1.00 57.72 N
ATOM 17 C5 A B 235 92.976 120.295 -3.278 1.00 58.23 C
ATOM 18 C6 A B 235 93.136 120.570 -1.906 1.00 55.39 C
ATOM 19 N6 A B 235 93.772 119.760 -1.058 1.00 53.12 N
ATOM 20 N1 A B 235 92.617 121.721 -1.433 1.00 53.66 N
ATOM 21 C2 A B 235 91.985 122.535 -2.280 1.00 55.78 C
ATOM 22 N3 A B 235 91.773 122.391 -3.586 1.00 58.67 N
ATOM 23 C4 A B 235 92.302 121.237 -4.029 1.00 58.34 C
ATOM 24 P A B 236 90.610 124.015 -9.949 1.00 67.17 P
ATOM 25 OP1 A B 236 91.692 123.865 -10.958 1.00 67.76 O
ATOM 26 OP2 A B 236 90.145 125.372 -9.563 1.00 68.37 O
ATOM 27 O5' A B 236 89.341 123.170 -10.418 1.00 65.49 O
TER
Atoms:
OP1: (96.626,122.652,5.106)
OP2: (97.069,123.848,2.889)
C3': (98.866,119.865,1.203)
C1': (97.993,119.317,-0.914)
C5': (96.608,120.972,1.693)
O4': (96.908,119.276,-0.004)
C8: (97.600,119.098,-3.410)
O2': (100.333,119.908,-0.767)
C6: (95.734,121.922,-4.371)
C5: (96.483,120.856,-3.838)
C4: (96.774,120.905,-2.486)
P: (96.434,122.733,3.645)
C4': (97.354,119.715,1.308)
C2': (99.047,120.219,-0.272)
C2: (95.720,122.821,-2.242)
N1: (95.363,122.909,-3.528)
N3: (96.419,121.870,-1.623)
N6: (95.369,122.008,-5.653)
N7: (97.015,119.710,-4.411)
N9: (97.485,119.759,-2.213)
O5': (96.968,121.369,3.028)
O3': (99.454,118.594,1.470)
OP2: (97.069,123.848,2.889)
C3': (98.866,119.865,1.203)
C1': (97.993,119.317,-0.914)
C5': (96.608,120.972,1.693)
O4': (96.908,119.276,-0.004)
C8: (97.600,119.098,-3.410)
O2': (100.333,119.908,-0.767)
C6: (95.734,121.922,-4.371)
C5: (96.483,120.856,-3.838)
C4: (96.774,120.905,-2.486)
P: (96.434,122.733,3.645)
C4': (97.354,119.715,1.308)
C2': (99.047,120.219,-0.272)
C2: (95.720,122.821,-2.242)
N1: (95.363,122.909,-3.528)
N3: (96.419,121.870,-1.623)
N6: (95.369,122.008,-5.653)
N7: (97.015,119.710,-4.411)
N9: (97.485,119.759,-2.213)
O5': (96.968,121.369,3.028)
O3': (99.454,118.594,1.470)
OP1: (93.409,117.665,-10.643)
OP2: (95.402,118.518,-9.269)
C3': (91.963,122.155,-8.699)
C1': (91.728,121.443,-6.473)
C5': (91.740,119.722,-9.429)
O4': (91.005,120.517,-7.257)
C8: (92.942,119.545,-5.265)
O2': (93.260,123.264,-6.914)
C6: (93.136,120.570,-1.906)
C5: (92.976,120.295,-3.278)
C4: (92.302,121.237,-4.029)
P: (93.944,118.262,-9.390)
C4': (91.132,120.874,-8.666)
C2': (92.773,122.038,-7.413)
C2: (91.985,122.535,-2.280)
N1: (92.617,121.721,-1.433)
N3: (91.773,122.391,-3.586)
N6: (93.772,119.760,-1.058)
N7: (93.372,119.226,-4.071)
N9: (92.297,120.756,-5.315)
O5': (93.144,119.608,-9.108)
O3': (91.098,123.279,-8.611)
OP2: (95.402,118.518,-9.269)
C3': (91.963,122.155,-8.699)
C1': (91.728,121.443,-6.473)
C5': (91.740,119.722,-9.429)
O4': (91.005,120.517,-7.257)
C8: (92.942,119.545,-5.265)
O2': (93.260,123.264,-6.914)
C6: (93.136,120.570,-1.906)
C5: (92.976,120.295,-3.278)
C4: (92.302,121.237,-4.029)
P: (93.944,118.262,-9.390)
C4': (91.132,120.874,-8.666)
C2': (92.773,122.038,-7.413)
C2: (91.985,122.535,-2.280)
N1: (92.617,121.721,-1.433)
N3: (91.773,122.391,-3.586)
N6: (93.772,119.760,-1.058)
N7: (93.372,119.226,-4.071)
N9: (92.297,120.756,-5.315)
O5': (93.144,119.608,-9.108)
O3': (91.098,123.279,-8.611)
Image (generated by PyMOL):