Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:9112:914
Extra
PDB:
ATOM 1 O3' U A 111 49.802 33.880 113.540 1.00 59.74 O
ATOM 2 P C A 112 50.331 32.422 113.943 1.00 59.63 P
ATOM 3 OP1 C A 112 50.390 31.594 112.716 1.00 58.82 O
ATOM 4 OP2 C A 112 49.547 31.955 115.112 1.00 60.11 O
ATOM 5 O5' C A 112 51.825 32.677 114.411 1.00 58.63 O
ATOM 6 C5' C A 112 52.775 33.205 113.492 1.00 59.19 C
ATOM 7 C4' C A 112 54.030 32.384 113.516 1.00 59.52 C
ATOM 8 O4' C A 112 54.886 32.814 114.607 1.00 60.41 O
ATOM 9 C3' C A 112 53.826 30.886 113.682 1.00 59.38 C
ATOM 10 O3' C A 112 54.745 30.199 112.863 1.00 60.43 O
ATOM 11 C2' C A 112 54.187 30.661 115.144 1.00 61.08 C
ATOM 12 O2' C A 112 54.673 29.357 115.385 1.00 62.66 O
ATOM 13 C1' C A 112 55.303 31.684 115.330 1.00 61.96 C
ATOM 14 N1 C A 112 55.628 32.084 116.715 1.00 64.04 N
ATOM 15 C2 C A 112 56.906 32.617 116.971 1.00 64.83 C
ATOM 16 O2 C A 112 57.691 32.786 116.020 1.00 64.92 O
ATOM 17 N3 C A 112 57.251 32.933 118.245 1.00 65.02 N
ATOM 18 C4 C A 112 56.379 32.742 119.241 1.00 65.17 C
ATOM 19 N4 C A 112 56.776 33.038 120.483 1.00 64.05 N
ATOM 20 C5 C A 112 55.062 32.231 119.007 1.00 64.89 C
ATOM 21 C6 C A 112 54.731 31.924 117.741 1.00 64.73 C
ATOM 22 P G A 113 54.211 29.449 111.553 1.00 63.04 P
ATOM 23 OP1 G A 113 53.215 28.431 111.987 1.00 62.47 O
ATOM 24 OP2 G A 113 55.377 29.040 110.722 1.00 62.45 O
ATOM 25 O5' G A 113 53.428 30.591 110.774 1.00 62.06 O
TER
ATOM 1 O3' G B 13 63.224 35.241 109.757 1.00 61.45 O
ATOM 2 P C B 14 63.972 34.164 110.682 1.00 61.22 P
ATOM 3 OP1 C B 14 65.274 33.824 110.053 1.00 60.70 O
ATOM 4 OP2 C B 14 62.979 33.091 110.964 1.00 60.97 O
ATOM 5 O5' C B 14 64.284 34.955 112.031 1.00 59.99 O
ATOM 6 C5' C B 14 65.384 35.873 112.109 1.00 58.74 C
ATOM 7 C4' C B 14 65.711 36.181 113.551 1.00 59.55 C
ATOM 8 O4' C B 14 64.587 36.851 114.174 1.00 59.43 O
ATOM 9 C3' C B 14 65.932 34.994 114.471 1.00 60.36 C
ATOM 10 O3' C B 14 67.210 34.396 114.334 1.00 64.15 O
ATOM 11 C2' C B 14 65.747 35.624 115.840 1.00 58.31 C
ATOM 12 O2' C B 14 66.850 36.389 116.259 1.00 59.00 O
ATOM 13 C1' C B 14 64.588 36.572 115.566 1.00 57.89 C
ATOM 14 N1 C B 14 63.308 35.963 115.956 1.00 56.99 N
ATOM 15 C2 C B 14 62.965 35.974 117.305 1.00 56.89 C
ATOM 16 O2 C B 14 63.742 36.503 118.114 1.00 58.59 O
ATOM 17 N3 C B 14 61.805 35.412 117.699 1.00 56.12 N
ATOM 18 C4 C B 14 60.997 34.858 116.799 1.00 56.07 C
ATOM 19 N4 C B 14 59.861 34.317 117.236 1.00 57.61 N
ATOM 20 C5 C B 14 61.317 34.834 115.412 1.00 55.88 C
ATOM 21 C6 C B 14 62.472 35.394 115.036 1.00 56.48 C
ATOM 22 P G B 15 67.370 32.822 114.612 1.00 66.42 P
ATOM 23 OP1 G B 15 68.822 32.496 114.563 1.00 65.94 O
ATOM 24 OP2 G B 15 66.423 32.106 113.710 1.00 67.01 O
ATOM 25 O5' G B 15 66.859 32.654 116.111 1.00 65.77 O
TER
ATOM 2 P C A 112 50.331 32.422 113.943 1.00 59.63 P
ATOM 3 OP1 C A 112 50.390 31.594 112.716 1.00 58.82 O
ATOM 4 OP2 C A 112 49.547 31.955 115.112 1.00 60.11 O
ATOM 5 O5' C A 112 51.825 32.677 114.411 1.00 58.63 O
ATOM 6 C5' C A 112 52.775 33.205 113.492 1.00 59.19 C
ATOM 7 C4' C A 112 54.030 32.384 113.516 1.00 59.52 C
ATOM 8 O4' C A 112 54.886 32.814 114.607 1.00 60.41 O
ATOM 9 C3' C A 112 53.826 30.886 113.682 1.00 59.38 C
ATOM 10 O3' C A 112 54.745 30.199 112.863 1.00 60.43 O
ATOM 11 C2' C A 112 54.187 30.661 115.144 1.00 61.08 C
ATOM 12 O2' C A 112 54.673 29.357 115.385 1.00 62.66 O
ATOM 13 C1' C A 112 55.303 31.684 115.330 1.00 61.96 C
ATOM 14 N1 C A 112 55.628 32.084 116.715 1.00 64.04 N
ATOM 15 C2 C A 112 56.906 32.617 116.971 1.00 64.83 C
ATOM 16 O2 C A 112 57.691 32.786 116.020 1.00 64.92 O
ATOM 17 N3 C A 112 57.251 32.933 118.245 1.00 65.02 N
ATOM 18 C4 C A 112 56.379 32.742 119.241 1.00 65.17 C
ATOM 19 N4 C A 112 56.776 33.038 120.483 1.00 64.05 N
ATOM 20 C5 C A 112 55.062 32.231 119.007 1.00 64.89 C
ATOM 21 C6 C A 112 54.731 31.924 117.741 1.00 64.73 C
ATOM 22 P G A 113 54.211 29.449 111.553 1.00 63.04 P
ATOM 23 OP1 G A 113 53.215 28.431 111.987 1.00 62.47 O
ATOM 24 OP2 G A 113 55.377 29.040 110.722 1.00 62.45 O
ATOM 25 O5' G A 113 53.428 30.591 110.774 1.00 62.06 O
TER
ATOM 1 O3' G B 13 63.224 35.241 109.757 1.00 61.45 O
ATOM 2 P C B 14 63.972 34.164 110.682 1.00 61.22 P
ATOM 3 OP1 C B 14 65.274 33.824 110.053 1.00 60.70 O
ATOM 4 OP2 C B 14 62.979 33.091 110.964 1.00 60.97 O
ATOM 5 O5' C B 14 64.284 34.955 112.031 1.00 59.99 O
ATOM 6 C5' C B 14 65.384 35.873 112.109 1.00 58.74 C
ATOM 7 C4' C B 14 65.711 36.181 113.551 1.00 59.55 C
ATOM 8 O4' C B 14 64.587 36.851 114.174 1.00 59.43 O
ATOM 9 C3' C B 14 65.932 34.994 114.471 1.00 60.36 C
ATOM 10 O3' C B 14 67.210 34.396 114.334 1.00 64.15 O
ATOM 11 C2' C B 14 65.747 35.624 115.840 1.00 58.31 C
ATOM 12 O2' C B 14 66.850 36.389 116.259 1.00 59.00 O
ATOM 13 C1' C B 14 64.588 36.572 115.566 1.00 57.89 C
ATOM 14 N1 C B 14 63.308 35.963 115.956 1.00 56.99 N
ATOM 15 C2 C B 14 62.965 35.974 117.305 1.00 56.89 C
ATOM 16 O2 C B 14 63.742 36.503 118.114 1.00 58.59 O
ATOM 17 N3 C B 14 61.805 35.412 117.699 1.00 56.12 N
ATOM 18 C4 C B 14 60.997 34.858 116.799 1.00 56.07 C
ATOM 19 N4 C B 14 59.861 34.317 117.236 1.00 57.61 N
ATOM 20 C5 C B 14 61.317 34.834 115.412 1.00 55.88 C
ATOM 21 C6 C B 14 62.472 35.394 115.036 1.00 56.48 C
ATOM 22 P G B 15 67.370 32.822 114.612 1.00 66.42 P
ATOM 23 OP1 G B 15 68.822 32.496 114.563 1.00 65.94 O
ATOM 24 OP2 G B 15 66.423 32.106 113.710 1.00 67.01 O
ATOM 25 O5' G B 15 66.859 32.654 116.111 1.00 65.77 O
TER
Atoms:
C2: (56.906,32.617,116.971)
OP1: (50.390,31.594,112.716)
OP2: (49.547,31.955,115.112)
C4: (56.379,32.742,119.241)
O5': (51.825,32.677,114.411)
C3': (53.826,30.886,113.682)
C1': (55.303,31.684,115.330)
O4': (54.886,32.814,114.607)
C5': (52.775,33.205,113.492)
P: (50.331,32.422,113.943)
O2: (57.691,32.786,116.020)
C4': (54.030,32.384,113.516)
C2': (54.187,30.661,115.144)
O2': (54.673,29.357,115.385)
N1: (55.628,32.084,116.715)
N3: (57.251,32.933,118.245)
N4: (56.776,33.038,120.483)
C6: (54.731,31.924,117.741)
C5: (55.062,32.231,119.007)
O3': (54.745,30.199,112.863)
OP1: (50.390,31.594,112.716)
OP2: (49.547,31.955,115.112)
C4: (56.379,32.742,119.241)
O5': (51.825,32.677,114.411)
C3': (53.826,30.886,113.682)
C1': (55.303,31.684,115.330)
O4': (54.886,32.814,114.607)
C5': (52.775,33.205,113.492)
P: (50.331,32.422,113.943)
O2: (57.691,32.786,116.020)
C4': (54.030,32.384,113.516)
C2': (54.187,30.661,115.144)
O2': (54.673,29.357,115.385)
N1: (55.628,32.084,116.715)
N3: (57.251,32.933,118.245)
N4: (56.776,33.038,120.483)
C6: (54.731,31.924,117.741)
C5: (55.062,32.231,119.007)
O3': (54.745,30.199,112.863)
C2: (62.965,35.974,117.305)
OP1: (65.274,33.824,110.053)
OP2: (62.979,33.091,110.964)
C4: (60.997,34.858,116.799)
O5': (64.284,34.955,112.031)
C3': (65.932,34.994,114.471)
C1': (64.588,36.572,115.566)
O4': (64.587,36.851,114.174)
C5': (65.384,35.873,112.109)
P: (63.972,34.164,110.682)
O2: (63.742,36.503,118.114)
C4': (65.711,36.181,113.551)
C2': (65.747,35.624,115.840)
O2': (66.850,36.389,116.259)
N1: (63.308,35.963,115.956)
N3: (61.805,35.412,117.699)
N4: (59.861,34.317,117.236)
C6: (62.472,35.394,115.036)
C5: (61.317,34.834,115.412)
O3': (67.210,34.396,114.334)
OP1: (65.274,33.824,110.053)
OP2: (62.979,33.091,110.964)
C4: (60.997,34.858,116.799)
O5': (64.284,34.955,112.031)
C3': (65.932,34.994,114.471)
C1': (64.588,36.572,115.566)
O4': (64.587,36.851,114.174)
C5': (65.384,35.873,112.109)
P: (63.972,34.164,110.682)
O2: (63.742,36.503,118.114)
C4': (65.711,36.181,113.551)
C2': (65.747,35.624,115.840)
O2': (66.850,36.389,116.259)
N1: (63.308,35.963,115.956)
N3: (61.805,35.412,117.699)
N4: (59.861,34.317,117.236)
C6: (62.472,35.394,115.036)
C5: (61.317,34.834,115.412)
O3': (67.210,34.396,114.334)
Image (generated by PyMOL):