Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0366:0398
Extra
PDB:
ATOM 1 O3' C A 365 92.017 101.865 5.349 1.00 57.91 O
ATOM 2 P A A 366 92.262 101.287 6.830 1.00 58.38 P
ATOM 3 OP1 A A 366 93.115 102.313 7.475 1.00 58.33 O
ATOM 4 OP2 A A 366 92.731 99.878 6.773 1.00 57.74 O
ATOM 5 O5' A A 366 90.810 101.288 7.489 1.00 55.01 O
ATOM 6 C5' A A 366 90.048 102.510 7.604 1.00 55.51 C
ATOM 7 C4' A A 366 88.620 102.206 8.000 1.00 55.05 C
ATOM 8 O4' A A 366 87.945 101.515 6.918 1.00 56.41 O
ATOM 9 C3' A A 366 88.460 101.287 9.202 1.00 54.78 C
ATOM 10 O3' A A 366 88.544 102.031 10.410 1.00 54.17 O
ATOM 11 C2' A A 366 87.079 100.684 8.983 1.00 54.32 C
ATOM 12 O2' A A 366 86.026 101.509 9.427 1.00 53.30 O
ATOM 13 C1' A A 366 87.034 100.568 7.455 1.00 56.39 C
ATOM 14 N9 A A 366 87.397 99.233 6.973 1.00 56.53 N
ATOM 15 C8 A A 366 88.637 98.736 6.640 1.00 55.92 C
ATOM 16 N7 A A 366 88.622 97.475 6.279 1.00 54.98 N
ATOM 17 C5 A A 366 87.283 97.119 6.373 1.00 56.43 C
ATOM 18 C6 A A 366 86.605 95.910 6.138 1.00 56.77 C
ATOM 19 N6 A A 366 87.207 94.787 5.739 1.00 56.98 N
ATOM 20 N1 A A 366 85.269 95.893 6.330 1.00 56.31 N
ATOM 21 C2 A A 366 84.662 97.017 6.729 1.00 56.21 C
ATOM 22 N3 A A 366 85.187 98.211 6.983 1.00 57.17 N
ATOM 23 C4 A A 366 86.517 98.195 6.787 1.00 56.36 C
ATOM 24 P G A 367 88.868 101.284 11.797 1.00 51.91 P
ATOM 25 OP1 G A 367 90.101 100.466 11.623 1.00 49.63 O
ATOM 26 OP2 G A 367 87.618 100.645 12.288 1.00 51.11 O
ATOM 27 O5' G A 367 89.208 102.489 12.779 1.00 50.65 O
TER
ATOM 1 O3' U B 397 92.569 92.719 8.674 1.00 62.12 O
ATOM 2 P A B 398 92.472 92.293 7.129 1.00 63.03 P
ATOM 3 OP1 A B 398 93.566 91.339 6.810 1.00 62.76 O
ATOM 4 OP2 A B 398 92.317 93.527 6.314 1.00 62.57 O
ATOM 5 O5' A B 398 91.090 91.510 7.071 1.00 64.54 O
ATOM 6 C5' A B 398 90.890 90.310 7.836 1.00 65.87 C
ATOM 7 C4' A B 398 89.416 89.997 7.933 1.00 68.41 C
ATOM 8 O4' A B 398 88.777 90.919 8.863 1.00 68.02 O
ATOM 9 C3' A B 398 88.642 90.103 6.621 1.00 68.78 C
ATOM 10 O3' A B 398 87.622 89.115 6.573 1.00 70.96 O
ATOM 11 C2' A B 398 88.010 91.487 6.725 1.00 69.03 C
ATOM 12 O2' A B 398 86.835 91.633 5.950 1.00 68.00 O
ATOM 13 C1' A B 398 87.692 91.554 8.217 1.00 70.36 C
ATOM 14 N9 A B 398 87.560 92.917 8.734 1.00 72.02 N
ATOM 15 C8 A B 398 88.536 93.871 8.901 1.00 72.14 C
ATOM 16 N7 A B 398 88.086 95.010 9.370 1.00 72.39 N
ATOM 17 C5 A B 398 86.724 94.790 9.527 1.00 72.72 C
ATOM 18 C6 A B 398 85.679 95.615 9.983 1.00 73.95 C
ATOM 19 N6 A B 398 85.853 96.882 10.374 1.00 74.06 N
ATOM 20 N1 A B 398 84.434 95.089 10.021 1.00 74.39 N
ATOM 21 C2 A B 398 84.262 93.820 9.620 1.00 74.32 C
ATOM 22 N3 A B 398 85.162 92.949 9.168 1.00 72.63 N
ATOM 23 C4 A B 398 86.387 93.504 9.145 1.00 72.32 C
ATOM 24 P A B 399 87.702 87.941 5.477 1.00 72.22 P
ATOM 25 OP1 A B 399 88.168 88.514 4.183 1.00 70.95 O
ATOM 26 OP2 A B 399 86.411 87.205 5.530 1.00 72.06 O
ATOM 27 O5' A B 399 88.860 86.997 6.028 1.00 71.32 O
TER
ATOM 2 P A A 366 92.262 101.287 6.830 1.00 58.38 P
ATOM 3 OP1 A A 366 93.115 102.313 7.475 1.00 58.33 O
ATOM 4 OP2 A A 366 92.731 99.878 6.773 1.00 57.74 O
ATOM 5 O5' A A 366 90.810 101.288 7.489 1.00 55.01 O
ATOM 6 C5' A A 366 90.048 102.510 7.604 1.00 55.51 C
ATOM 7 C4' A A 366 88.620 102.206 8.000 1.00 55.05 C
ATOM 8 O4' A A 366 87.945 101.515 6.918 1.00 56.41 O
ATOM 9 C3' A A 366 88.460 101.287 9.202 1.00 54.78 C
ATOM 10 O3' A A 366 88.544 102.031 10.410 1.00 54.17 O
ATOM 11 C2' A A 366 87.079 100.684 8.983 1.00 54.32 C
ATOM 12 O2' A A 366 86.026 101.509 9.427 1.00 53.30 O
ATOM 13 C1' A A 366 87.034 100.568 7.455 1.00 56.39 C
ATOM 14 N9 A A 366 87.397 99.233 6.973 1.00 56.53 N
ATOM 15 C8 A A 366 88.637 98.736 6.640 1.00 55.92 C
ATOM 16 N7 A A 366 88.622 97.475 6.279 1.00 54.98 N
ATOM 17 C5 A A 366 87.283 97.119 6.373 1.00 56.43 C
ATOM 18 C6 A A 366 86.605 95.910 6.138 1.00 56.77 C
ATOM 19 N6 A A 366 87.207 94.787 5.739 1.00 56.98 N
ATOM 20 N1 A A 366 85.269 95.893 6.330 1.00 56.31 N
ATOM 21 C2 A A 366 84.662 97.017 6.729 1.00 56.21 C
ATOM 22 N3 A A 366 85.187 98.211 6.983 1.00 57.17 N
ATOM 23 C4 A A 366 86.517 98.195 6.787 1.00 56.36 C
ATOM 24 P G A 367 88.868 101.284 11.797 1.00 51.91 P
ATOM 25 OP1 G A 367 90.101 100.466 11.623 1.00 49.63 O
ATOM 26 OP2 G A 367 87.618 100.645 12.288 1.00 51.11 O
ATOM 27 O5' G A 367 89.208 102.489 12.779 1.00 50.65 O
TER
ATOM 1 O3' U B 397 92.569 92.719 8.674 1.00 62.12 O
ATOM 2 P A B 398 92.472 92.293 7.129 1.00 63.03 P
ATOM 3 OP1 A B 398 93.566 91.339 6.810 1.00 62.76 O
ATOM 4 OP2 A B 398 92.317 93.527 6.314 1.00 62.57 O
ATOM 5 O5' A B 398 91.090 91.510 7.071 1.00 64.54 O
ATOM 6 C5' A B 398 90.890 90.310 7.836 1.00 65.87 C
ATOM 7 C4' A B 398 89.416 89.997 7.933 1.00 68.41 C
ATOM 8 O4' A B 398 88.777 90.919 8.863 1.00 68.02 O
ATOM 9 C3' A B 398 88.642 90.103 6.621 1.00 68.78 C
ATOM 10 O3' A B 398 87.622 89.115 6.573 1.00 70.96 O
ATOM 11 C2' A B 398 88.010 91.487 6.725 1.00 69.03 C
ATOM 12 O2' A B 398 86.835 91.633 5.950 1.00 68.00 O
ATOM 13 C1' A B 398 87.692 91.554 8.217 1.00 70.36 C
ATOM 14 N9 A B 398 87.560 92.917 8.734 1.00 72.02 N
ATOM 15 C8 A B 398 88.536 93.871 8.901 1.00 72.14 C
ATOM 16 N7 A B 398 88.086 95.010 9.370 1.00 72.39 N
ATOM 17 C5 A B 398 86.724 94.790 9.527 1.00 72.72 C
ATOM 18 C6 A B 398 85.679 95.615 9.983 1.00 73.95 C
ATOM 19 N6 A B 398 85.853 96.882 10.374 1.00 74.06 N
ATOM 20 N1 A B 398 84.434 95.089 10.021 1.00 74.39 N
ATOM 21 C2 A B 398 84.262 93.820 9.620 1.00 74.32 C
ATOM 22 N3 A B 398 85.162 92.949 9.168 1.00 72.63 N
ATOM 23 C4 A B 398 86.387 93.504 9.145 1.00 72.32 C
ATOM 24 P A B 399 87.702 87.941 5.477 1.00 72.22 P
ATOM 25 OP1 A B 399 88.168 88.514 4.183 1.00 70.95 O
ATOM 26 OP2 A B 399 86.411 87.205 5.530 1.00 72.06 O
ATOM 27 O5' A B 399 88.860 86.997 6.028 1.00 71.32 O
TER
Atoms:
OP1: (93.115,102.313,7.475)
OP2: (92.731,99.878,6.773)
C3': (88.460,101.287,9.202)
C1': (87.034,100.568,7.455)
C5': (90.048,102.510,7.604)
O4': (87.945,101.515,6.918)
C8: (88.637,98.736,6.640)
O2': (86.026,101.509,9.427)
C6: (86.605,95.910,6.138)
C5: (87.283,97.119,6.373)
C4: (86.517,98.195,6.787)
P: (92.262,101.287,6.830)
C4': (88.620,102.206,8.000)
C2': (87.079,100.684,8.983)
C2: (84.662,97.017,6.729)
N1: (85.269,95.893,6.330)
N3: (85.187,98.211,6.983)
N6: (87.207,94.787,5.739)
N7: (88.622,97.475,6.279)
N9: (87.397,99.233,6.973)
O5': (90.810,101.288,7.489)
O3': (88.544,102.031,10.410)
OP2: (92.731,99.878,6.773)
C3': (88.460,101.287,9.202)
C1': (87.034,100.568,7.455)
C5': (90.048,102.510,7.604)
O4': (87.945,101.515,6.918)
C8: (88.637,98.736,6.640)
O2': (86.026,101.509,9.427)
C6: (86.605,95.910,6.138)
C5: (87.283,97.119,6.373)
C4: (86.517,98.195,6.787)
P: (92.262,101.287,6.830)
C4': (88.620,102.206,8.000)
C2': (87.079,100.684,8.983)
C2: (84.662,97.017,6.729)
N1: (85.269,95.893,6.330)
N3: (85.187,98.211,6.983)
N6: (87.207,94.787,5.739)
N7: (88.622,97.475,6.279)
N9: (87.397,99.233,6.973)
O5': (90.810,101.288,7.489)
O3': (88.544,102.031,10.410)
OP1: (93.566,91.339,6.810)
OP2: (92.317,93.527,6.314)
C3': (88.642,90.103,6.621)
C1': (87.692,91.554,8.217)
C5': (90.890,90.310,7.836)
O4': (88.777,90.919,8.863)
C8: (88.536,93.871,8.901)
O2': (86.835,91.633,5.950)
C6: (85.679,95.615,9.983)
C5: (86.724,94.790,9.527)
C4: (86.387,93.504,9.145)
P: (92.472,92.293,7.129)
C4': (89.416,89.997,7.933)
C2': (88.010,91.487,6.725)
C2: (84.262,93.820,9.620)
N1: (84.434,95.089,10.021)
N3: (85.162,92.949,9.168)
N6: (85.853,96.882,10.374)
N7: (88.086,95.010,9.370)
N9: (87.560,92.917,8.734)
O5': (91.090,91.510,7.071)
O3': (87.622,89.115,6.573)
OP2: (92.317,93.527,6.314)
C3': (88.642,90.103,6.621)
C1': (87.692,91.554,8.217)
C5': (90.890,90.310,7.836)
O4': (88.777,90.919,8.863)
C8: (88.536,93.871,8.901)
O2': (86.835,91.633,5.950)
C6: (85.679,95.615,9.983)
C5: (86.724,94.790,9.527)
C4: (86.387,93.504,9.145)
P: (92.472,92.293,7.129)
C4': (89.416,89.997,7.933)
C2': (88.010,91.487,6.725)
C2: (84.262,93.820,9.620)
N1: (84.434,95.089,10.021)
N3: (85.162,92.949,9.168)
N6: (85.853,96.882,10.374)
N7: (88.086,95.010,9.370)
N9: (87.560,92.917,8.734)
O5': (91.090,91.510,7.071)
O3': (87.622,89.115,6.573)
Image (generated by PyMOL):