Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GDI:Y18:Y22
Extra
PDB:
ATOM 1 O3' C A 17 7.322 7.774 23.238 1.00 37.47 O
ATOM 2 P U A 18 6.219 6.631 23.038 1.00 37.43 P
ATOM 3 OP1 U A 18 6.682 5.419 23.753 1.00 37.55 O
ATOM 4 OP2 U A 18 5.910 6.563 21.593 1.00 37.47 O
ATOM 5 O5' U A 18 4.934 7.216 23.791 1.00 37.23 O
ATOM 6 C5' U A 18 3.711 6.488 23.779 1.00 36.50 C
ATOM 7 C4' U A 18 2.994 6.560 25.119 1.00 36.27 C
ATOM 8 O4' U A 18 3.610 5.658 26.072 1.00 35.96 O
ATOM 9 C3' U A 18 2.975 7.919 25.810 1.00 36.47 C
ATOM 10 O3' U A 18 1.766 8.036 26.549 1.00 36.73 O
ATOM 11 C2' U A 18 4.159 7.816 26.765 1.00 36.05 C
ATOM 12 O2' U A 18 4.034 8.717 27.848 1.00 36.01 O
ATOM 13 C1' U A 18 3.970 6.378 27.234 1.00 35.63 C
ATOM 14 N1 U A 18 5.160 5.696 27.822 1.00 35.55 N
ATOM 15 C2 U A 18 5.150 5.355 29.159 1.00 35.10 C
ATOM 16 O2 U A 18 4.226 5.619 29.907 1.00 34.80 O
ATOM 17 N3 U A 18 6.275 4.701 29.598 1.00 35.01 N
ATOM 18 C4 U A 18 7.379 4.347 28.844 1.00 35.05 C
ATOM 19 O4 U A 18 8.317 3.762 29.374 1.00 35.05 O
ATOM 20 C5 U A 18 7.310 4.723 27.456 1.00 35.31 C
ATOM 21 C6 U A 18 6.224 5.361 27.007 1.00 35.65 C
ATOM 22 P G A 19 0.403 8.466 25.831 1.00 37.41 P
ATOM 23 OP1 G A 19 0.390 7.900 24.462 1.00 36.72 O
ATOM 24 OP2 G A 19 0.233 9.924 26.032 1.00 37.43 O
ATOM 25 O5' G A 19 -0.697 7.702 26.702 1.00 37.11 O
TER
ATOM 1 O3' G B 21 3.295 -0.564 37.390 1.00 41.96 O
ATOM 2 P U B 22 4.559 0.187 38.021 1.00 43.12 P
ATOM 3 OP1 U B 22 4.752 -0.317 39.400 1.00 43.80 O
ATOM 4 OP2 U B 22 4.398 1.641 37.791 1.00 43.37 O
ATOM 5 O5' U B 22 5.773 -0.316 37.107 1.00 43.01 O
ATOM 6 C5' U B 22 6.127 -1.694 37.064 1.00 43.04 C
ATOM 7 C4' U B 22 7.127 -1.941 35.949 1.00 43.23 C
ATOM 8 O4' U B 22 6.528 -1.622 34.668 1.00 42.90 O
ATOM 9 C3' U B 22 8.365 -1.060 36.001 1.00 43.58 C
ATOM 10 O3' U B 22 9.316 -1.595 36.914 1.00 44.70 O
ATOM 11 C2' U B 22 8.839 -1.130 34.553 1.00 42.98 C
ATOM 12 O2' U B 22 9.528 -2.330 34.260 1.00 42.80 O
ATOM 13 C1' U B 22 7.512 -1.087 33.798 1.00 42.22 C
ATOM 14 N1 U B 22 7.096 0.290 33.382 1.00 41.27 N
ATOM 15 C2 U B 22 7.687 0.874 32.278 1.00 40.83 C
ATOM 16 O2 U B 22 8.546 0.328 31.608 1.00 40.12 O
ATOM 17 N3 U B 22 7.236 2.137 31.983 1.00 40.54 N
ATOM 18 C4 U B 22 6.272 2.860 32.662 1.00 40.75 C
ATOM 19 O4 U B 22 5.970 3.985 32.277 1.00 41.08 O
ATOM 20 C5 U B 22 5.703 2.186 33.801 1.00 40.78 C
ATOM 21 C6 U B 22 6.127 0.955 34.108 1.00 41.05 C
ATOM 22 P G B 23 10.288 -0.613 37.718 1.00 45.46 P
ATOM 23 OP1 G B 23 10.546 -1.215 39.046 1.00 45.72 O
ATOM 24 OP2 G B 23 9.736 0.758 37.629 1.00 45.55 O
ATOM 25 O5' G B 23 11.632 -0.667 36.850 1.00 45.10 O
TER
ATOM 2 P U A 18 6.219 6.631 23.038 1.00 37.43 P
ATOM 3 OP1 U A 18 6.682 5.419 23.753 1.00 37.55 O
ATOM 4 OP2 U A 18 5.910 6.563 21.593 1.00 37.47 O
ATOM 5 O5' U A 18 4.934 7.216 23.791 1.00 37.23 O
ATOM 6 C5' U A 18 3.711 6.488 23.779 1.00 36.50 C
ATOM 7 C4' U A 18 2.994 6.560 25.119 1.00 36.27 C
ATOM 8 O4' U A 18 3.610 5.658 26.072 1.00 35.96 O
ATOM 9 C3' U A 18 2.975 7.919 25.810 1.00 36.47 C
ATOM 10 O3' U A 18 1.766 8.036 26.549 1.00 36.73 O
ATOM 11 C2' U A 18 4.159 7.816 26.765 1.00 36.05 C
ATOM 12 O2' U A 18 4.034 8.717 27.848 1.00 36.01 O
ATOM 13 C1' U A 18 3.970 6.378 27.234 1.00 35.63 C
ATOM 14 N1 U A 18 5.160 5.696 27.822 1.00 35.55 N
ATOM 15 C2 U A 18 5.150 5.355 29.159 1.00 35.10 C
ATOM 16 O2 U A 18 4.226 5.619 29.907 1.00 34.80 O
ATOM 17 N3 U A 18 6.275 4.701 29.598 1.00 35.01 N
ATOM 18 C4 U A 18 7.379 4.347 28.844 1.00 35.05 C
ATOM 19 O4 U A 18 8.317 3.762 29.374 1.00 35.05 O
ATOM 20 C5 U A 18 7.310 4.723 27.456 1.00 35.31 C
ATOM 21 C6 U A 18 6.224 5.361 27.007 1.00 35.65 C
ATOM 22 P G A 19 0.403 8.466 25.831 1.00 37.41 P
ATOM 23 OP1 G A 19 0.390 7.900 24.462 1.00 36.72 O
ATOM 24 OP2 G A 19 0.233 9.924 26.032 1.00 37.43 O
ATOM 25 O5' G A 19 -0.697 7.702 26.702 1.00 37.11 O
TER
ATOM 1 O3' G B 21 3.295 -0.564 37.390 1.00 41.96 O
ATOM 2 P U B 22 4.559 0.187 38.021 1.00 43.12 P
ATOM 3 OP1 U B 22 4.752 -0.317 39.400 1.00 43.80 O
ATOM 4 OP2 U B 22 4.398 1.641 37.791 1.00 43.37 O
ATOM 5 O5' U B 22 5.773 -0.316 37.107 1.00 43.01 O
ATOM 6 C5' U B 22 6.127 -1.694 37.064 1.00 43.04 C
ATOM 7 C4' U B 22 7.127 -1.941 35.949 1.00 43.23 C
ATOM 8 O4' U B 22 6.528 -1.622 34.668 1.00 42.90 O
ATOM 9 C3' U B 22 8.365 -1.060 36.001 1.00 43.58 C
ATOM 10 O3' U B 22 9.316 -1.595 36.914 1.00 44.70 O
ATOM 11 C2' U B 22 8.839 -1.130 34.553 1.00 42.98 C
ATOM 12 O2' U B 22 9.528 -2.330 34.260 1.00 42.80 O
ATOM 13 C1' U B 22 7.512 -1.087 33.798 1.00 42.22 C
ATOM 14 N1 U B 22 7.096 0.290 33.382 1.00 41.27 N
ATOM 15 C2 U B 22 7.687 0.874 32.278 1.00 40.83 C
ATOM 16 O2 U B 22 8.546 0.328 31.608 1.00 40.12 O
ATOM 17 N3 U B 22 7.236 2.137 31.983 1.00 40.54 N
ATOM 18 C4 U B 22 6.272 2.860 32.662 1.00 40.75 C
ATOM 19 O4 U B 22 5.970 3.985 32.277 1.00 41.08 O
ATOM 20 C5 U B 22 5.703 2.186 33.801 1.00 40.78 C
ATOM 21 C6 U B 22 6.127 0.955 34.108 1.00 41.05 C
ATOM 22 P G B 23 10.288 -0.613 37.718 1.00 45.46 P
ATOM 23 OP1 G B 23 10.546 -1.215 39.046 1.00 45.72 O
ATOM 24 OP2 G B 23 9.736 0.758 37.629 1.00 45.55 O
ATOM 25 O5' G B 23 11.632 -0.667 36.850 1.00 45.10 O
TER
Atoms:
C4: (7.379,4.347,28.844)
N3: (6.275,4.701,29.598)
OP1: (6.682,5.419,23.753)
OP2: (5.910,6.563,21.593)
C2: (5.150,5.355,29.159)
C1': (3.970,6.378,27.234)
C3': (2.975,7.919,25.810)
O5': (4.934,7.216,23.791)
O4': (3.610,5.658,26.072)
C5': (3.711,6.488,23.779)
P: (6.219,6.631,23.038)
C4': (2.994,6.560,25.119)
C2': (4.159,7.816,26.765)
O2': (4.034,8.717,27.848)
N1: (5.160,5.696,27.822)
O4: (8.317,3.762,29.374)
O2: (4.226,5.619,29.907)
C6: (6.224,5.361,27.007)
C5: (7.310,4.723,27.456)
O3': (1.766,8.036,26.549)
N3: (6.275,4.701,29.598)
OP1: (6.682,5.419,23.753)
OP2: (5.910,6.563,21.593)
C2: (5.150,5.355,29.159)
C1': (3.970,6.378,27.234)
C3': (2.975,7.919,25.810)
O5': (4.934,7.216,23.791)
O4': (3.610,5.658,26.072)
C5': (3.711,6.488,23.779)
P: (6.219,6.631,23.038)
C4': (2.994,6.560,25.119)
C2': (4.159,7.816,26.765)
O2': (4.034,8.717,27.848)
N1: (5.160,5.696,27.822)
O4: (8.317,3.762,29.374)
O2: (4.226,5.619,29.907)
C6: (6.224,5.361,27.007)
C5: (7.310,4.723,27.456)
O3': (1.766,8.036,26.549)
C4: (6.272,2.860,32.662)
N3: (7.236,2.137,31.983)
OP1: (4.752,-0.317,39.400)
OP2: (4.398,1.641,37.791)
C2: (7.687,0.874,32.278)
C1': (7.512,-1.087,33.798)
C3': (8.365,-1.060,36.001)
O5': (5.773,-0.316,37.107)
O4': (6.528,-1.622,34.668)
C5': (6.127,-1.694,37.064)
P: (4.559,0.187,38.021)
C4': (7.127,-1.941,35.949)
C2': (8.839,-1.130,34.553)
O2': (9.528,-2.330,34.260)
N1: (7.096,0.290,33.382)
O4: (5.970,3.985,32.277)
O2: (8.546,0.328,31.608)
C6: (6.127,0.955,34.108)
C5: (5.703,2.186,33.801)
O3': (9.316,-1.595,36.914)
N3: (7.236,2.137,31.983)
OP1: (4.752,-0.317,39.400)
OP2: (4.398,1.641,37.791)
C2: (7.687,0.874,32.278)
C1': (7.512,-1.087,33.798)
C3': (8.365,-1.060,36.001)
O5': (5.773,-0.316,37.107)
O4': (6.528,-1.622,34.668)
C5': (6.127,-1.694,37.064)
P: (4.559,0.187,38.021)
C4': (7.127,-1.941,35.949)
C2': (8.839,-1.130,34.553)
O2': (9.528,-2.330,34.260)
N1: (7.096,0.290,33.382)
O4: (5.970,3.985,32.277)
O2: (8.546,0.328,31.608)
C6: (6.127,0.955,34.108)
C5: (5.703,2.186,33.801)
O3': (9.316,-1.595,36.914)
Image (generated by PyMOL):