Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIG:X39:X51
Extra
PDB:
ATOM 1 O3' A A 38 -6.866 64.464 -2.659 1.00 23.64 O
ATOM 2 P U A 39 -6.591 63.170 -3.574 1.00 24.30 P
ATOM 3 OP1 U A 39 -5.366 63.410 -4.371 1.00 24.58 O
ATOM 4 OP2 U A 39 -7.866 62.848 -4.253 1.00 24.51 O
ATOM 5 O5' U A 39 -6.295 62.012 -2.506 1.00 24.51 O
ATOM 6 C5' U A 39 -5.940 60.692 -2.895 1.00 24.64 C
ATOM 7 C4' U A 39 -6.538 59.683 -1.924 1.00 24.80 C
ATOM 8 O4' U A 39 -7.021 60.341 -0.716 1.00 24.86 O
ATOM 9 C3' U A 39 -7.723 58.887 -2.470 1.00 24.63 C
ATOM 10 O3' U A 39 -7.675 57.514 -2.030 1.00 24.41 O
ATOM 11 C2' U A 39 -8.917 59.648 -1.888 1.00 25.04 C
ATOM 12 O2' U A 39 -10.094 58.866 -1.810 1.00 25.27 O
ATOM 13 C1' U A 39 -8.382 59.999 -0.498 1.00 25.03 C
ATOM 14 N1 U A 39 -9.118 61.117 0.230 1.00 25.45 N
ATOM 15 C2 U A 39 -9.943 60.830 1.314 1.00 25.61 C
ATOM 16 O2 U A 39 -10.131 59.707 1.750 1.00 25.59 O
ATOM 17 N3 U A 39 -10.554 61.919 1.896 1.00 25.65 N
ATOM 18 C4 U A 39 -10.439 63.247 1.512 1.00 25.70 C
ATOM 19 O4 U A 39 -11.049 64.127 2.119 1.00 25.35 O
ATOM 20 C5 U A 39 -9.571 63.470 0.380 1.00 25.55 C
ATOM 21 C6 U A 39 -8.959 62.425 -0.200 1.00 25.48 C
ATOM 22 P C A 40 -6.603 56.465 -2.607 1.00 24.28 P
ATOM 23 OP1 C A 40 -6.157 56.955 -3.932 1.00 24.09 O
ATOM 24 OP2 C A 40 -7.182 55.110 -2.479 1.00 24.26 O
ATOM 25 O5' C A 40 -5.366 56.580 -1.593 1.00 24.25 O
TER
ATOM 1 O3' A B 50 -17.878 56.291 7.784 1.00 18.31 O
ATOM 2 P U B 51 -18.568 57.331 6.780 1.00 19.11 P
ATOM 3 OP1 U B 51 -19.677 58.034 7.475 1.00 19.02 O
ATOM 4 OP2 U B 51 -18.876 56.606 5.528 1.00 19.06 O
ATOM 5 O5' U B 51 -17.370 58.357 6.477 1.00 19.83 O
ATOM 6 C5' U B 51 -16.947 59.318 7.455 1.00 21.06 C
ATOM 7 C4' U B 51 -16.498 60.646 6.849 1.00 21.69 C
ATOM 8 O4' U B 51 -15.180 60.491 6.258 1.00 22.00 O
ATOM 9 C3' U B 51 -17.405 61.274 5.773 1.00 21.97 C
ATOM 10 O3' U B 51 -17.856 62.663 6.004 1.00 21.85 O
ATOM 11 C2' U B 51 -16.635 61.051 4.459 1.00 22.24 C
ATOM 12 O2' U B 51 -16.762 62.113 3.529 1.00 22.91 O
ATOM 13 C1' U B 51 -15.176 60.858 4.891 1.00 22.45 C
ATOM 14 N1 U B 51 -14.434 59.774 4.129 1.00 23.05 N
ATOM 15 C2 U B 51 -13.083 59.910 3.804 1.00 23.44 C
ATOM 16 O2 U B 51 -12.397 60.880 4.083 1.00 23.76 O
ATOM 17 N3 U B 51 -12.541 58.846 3.114 1.00 23.46 N
ATOM 18 C4 U B 51 -13.190 57.684 2.721 1.00 23.33 C
ATOM 19 O4 U B 51 -12.580 56.820 2.103 1.00 23.19 O
ATOM 20 C5 U B 51 -14.579 57.604 3.093 1.00 23.10 C
ATOM 21 C6 U B 51 -15.129 58.626 3.766 1.00 22.97 C
ATOM 22 P C B 52 -17.167 63.809 6.907 1.00 21.67 P
ATOM 23 OP1 C B 52 -17.797 65.084 6.508 1.00 21.60 O
ATOM 24 OP2 C B 52 -15.694 63.690 6.819 1.00 21.84 O
ATOM 25 O5' C B 52 -17.628 63.495 8.412 1.00 21.35 O
TER
ATOM 2 P U A 39 -6.591 63.170 -3.574 1.00 24.30 P
ATOM 3 OP1 U A 39 -5.366 63.410 -4.371 1.00 24.58 O
ATOM 4 OP2 U A 39 -7.866 62.848 -4.253 1.00 24.51 O
ATOM 5 O5' U A 39 -6.295 62.012 -2.506 1.00 24.51 O
ATOM 6 C5' U A 39 -5.940 60.692 -2.895 1.00 24.64 C
ATOM 7 C4' U A 39 -6.538 59.683 -1.924 1.00 24.80 C
ATOM 8 O4' U A 39 -7.021 60.341 -0.716 1.00 24.86 O
ATOM 9 C3' U A 39 -7.723 58.887 -2.470 1.00 24.63 C
ATOM 10 O3' U A 39 -7.675 57.514 -2.030 1.00 24.41 O
ATOM 11 C2' U A 39 -8.917 59.648 -1.888 1.00 25.04 C
ATOM 12 O2' U A 39 -10.094 58.866 -1.810 1.00 25.27 O
ATOM 13 C1' U A 39 -8.382 59.999 -0.498 1.00 25.03 C
ATOM 14 N1 U A 39 -9.118 61.117 0.230 1.00 25.45 N
ATOM 15 C2 U A 39 -9.943 60.830 1.314 1.00 25.61 C
ATOM 16 O2 U A 39 -10.131 59.707 1.750 1.00 25.59 O
ATOM 17 N3 U A 39 -10.554 61.919 1.896 1.00 25.65 N
ATOM 18 C4 U A 39 -10.439 63.247 1.512 1.00 25.70 C
ATOM 19 O4 U A 39 -11.049 64.127 2.119 1.00 25.35 O
ATOM 20 C5 U A 39 -9.571 63.470 0.380 1.00 25.55 C
ATOM 21 C6 U A 39 -8.959 62.425 -0.200 1.00 25.48 C
ATOM 22 P C A 40 -6.603 56.465 -2.607 1.00 24.28 P
ATOM 23 OP1 C A 40 -6.157 56.955 -3.932 1.00 24.09 O
ATOM 24 OP2 C A 40 -7.182 55.110 -2.479 1.00 24.26 O
ATOM 25 O5' C A 40 -5.366 56.580 -1.593 1.00 24.25 O
TER
ATOM 1 O3' A B 50 -17.878 56.291 7.784 1.00 18.31 O
ATOM 2 P U B 51 -18.568 57.331 6.780 1.00 19.11 P
ATOM 3 OP1 U B 51 -19.677 58.034 7.475 1.00 19.02 O
ATOM 4 OP2 U B 51 -18.876 56.606 5.528 1.00 19.06 O
ATOM 5 O5' U B 51 -17.370 58.357 6.477 1.00 19.83 O
ATOM 6 C5' U B 51 -16.947 59.318 7.455 1.00 21.06 C
ATOM 7 C4' U B 51 -16.498 60.646 6.849 1.00 21.69 C
ATOM 8 O4' U B 51 -15.180 60.491 6.258 1.00 22.00 O
ATOM 9 C3' U B 51 -17.405 61.274 5.773 1.00 21.97 C
ATOM 10 O3' U B 51 -17.856 62.663 6.004 1.00 21.85 O
ATOM 11 C2' U B 51 -16.635 61.051 4.459 1.00 22.24 C
ATOM 12 O2' U B 51 -16.762 62.113 3.529 1.00 22.91 O
ATOM 13 C1' U B 51 -15.176 60.858 4.891 1.00 22.45 C
ATOM 14 N1 U B 51 -14.434 59.774 4.129 1.00 23.05 N
ATOM 15 C2 U B 51 -13.083 59.910 3.804 1.00 23.44 C
ATOM 16 O2 U B 51 -12.397 60.880 4.083 1.00 23.76 O
ATOM 17 N3 U B 51 -12.541 58.846 3.114 1.00 23.46 N
ATOM 18 C4 U B 51 -13.190 57.684 2.721 1.00 23.33 C
ATOM 19 O4 U B 51 -12.580 56.820 2.103 1.00 23.19 O
ATOM 20 C5 U B 51 -14.579 57.604 3.093 1.00 23.10 C
ATOM 21 C6 U B 51 -15.129 58.626 3.766 1.00 22.97 C
ATOM 22 P C B 52 -17.167 63.809 6.907 1.00 21.67 P
ATOM 23 OP1 C B 52 -17.797 65.084 6.508 1.00 21.60 O
ATOM 24 OP2 C B 52 -15.694 63.690 6.819 1.00 21.84 O
ATOM 25 O5' C B 52 -17.628 63.495 8.412 1.00 21.35 O
TER
Atoms:
C4: (-10.439,63.247,1.512)
N3: (-10.554,61.919,1.896)
OP1: (-5.366,63.410,-4.371)
OP2: (-7.866,62.848,-4.253)
C2: (-9.943,60.830,1.314)
C1': (-8.382,59.999,-0.498)
C3': (-7.723,58.887,-2.470)
O5': (-6.295,62.012,-2.506)
O4': (-7.021,60.341,-0.716)
C5': (-5.940,60.692,-2.895)
P: (-6.591,63.170,-3.574)
C4': (-6.538,59.683,-1.924)
C2': (-8.917,59.648,-1.888)
O2': (-10.094,58.866,-1.810)
N1: (-9.118,61.117,0.230)
O4: (-11.049,64.127,2.119)
O2: (-10.131,59.707,1.750)
C6: (-8.959,62.425,-0.200)
C5: (-9.571,63.470,0.380)
O3': (-7.675,57.514,-2.030)
N3: (-10.554,61.919,1.896)
OP1: (-5.366,63.410,-4.371)
OP2: (-7.866,62.848,-4.253)
C2: (-9.943,60.830,1.314)
C1': (-8.382,59.999,-0.498)
C3': (-7.723,58.887,-2.470)
O5': (-6.295,62.012,-2.506)
O4': (-7.021,60.341,-0.716)
C5': (-5.940,60.692,-2.895)
P: (-6.591,63.170,-3.574)
C4': (-6.538,59.683,-1.924)
C2': (-8.917,59.648,-1.888)
O2': (-10.094,58.866,-1.810)
N1: (-9.118,61.117,0.230)
O4: (-11.049,64.127,2.119)
O2: (-10.131,59.707,1.750)
C6: (-8.959,62.425,-0.200)
C5: (-9.571,63.470,0.380)
O3': (-7.675,57.514,-2.030)
C4: (-13.190,57.684,2.721)
N3: (-12.541,58.846,3.114)
OP1: (-19.677,58.034,7.475)
OP2: (-18.876,56.606,5.528)
C2: (-13.083,59.910,3.804)
C1': (-15.176,60.858,4.891)
C3': (-17.405,61.274,5.773)
O5': (-17.370,58.357,6.477)
O4': (-15.180,60.491,6.258)
C5': (-16.947,59.318,7.455)
P: (-18.568,57.331,6.780)
C4': (-16.498,60.646,6.849)
C2': (-16.635,61.051,4.459)
O2': (-16.762,62.113,3.529)
N1: (-14.434,59.774,4.129)
O4: (-12.580,56.820,2.103)
O2: (-12.397,60.880,4.083)
C6: (-15.129,58.626,3.766)
C5: (-14.579,57.604,3.093)
O3': (-17.856,62.663,6.004)
N3: (-12.541,58.846,3.114)
OP1: (-19.677,58.034,7.475)
OP2: (-18.876,56.606,5.528)
C2: (-13.083,59.910,3.804)
C1': (-15.176,60.858,4.891)
C3': (-17.405,61.274,5.773)
O5': (-17.370,58.357,6.477)
O4': (-15.180,60.491,6.258)
C5': (-16.947,59.318,7.455)
P: (-18.568,57.331,6.780)
C4': (-16.498,60.646,6.849)
C2': (-16.635,61.051,4.459)
O2': (-16.762,62.113,3.529)
N1: (-14.434,59.774,4.129)
O4: (-12.580,56.820,2.103)
O2: (-12.397,60.880,4.083)
C6: (-15.129,58.626,3.766)
C5: (-14.579,57.604,3.093)
O3': (-17.856,62.663,6.004)
Image (generated by PyMOL):