Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIM:A39:A51
Extra
PDB:
ATOM 1 O3' A A 38 -6.730 63.940 -2.417 1.00 49.36 O
ATOM 2 P U A 39 -6.607 63.250 -3.856 1.00 48.58 P
ATOM 3 OP1 U A 39 -5.192 63.313 -4.295 1.00 49.01 O
ATOM 4 OP2 U A 39 -7.672 63.840 -4.701 1.00 48.75 O
ATOM 5 O5' U A 39 -6.985 61.722 -3.582 1.00 47.22 O
ATOM 6 C5' U A 39 -5.982 60.777 -3.216 1.00 45.65 C
ATOM 7 C4' U A 39 -6.490 59.850 -2.123 1.00 44.21 C
ATOM 8 O4' U A 39 -6.947 60.625 -0.981 1.00 44.16 O
ATOM 9 C3' U A 39 -7.661 58.950 -2.522 1.00 43.11 C
ATOM 10 O3' U A 39 -7.474 57.643 -1.957 1.00 41.30 O
ATOM 11 C2' U A 39 -8.857 59.699 -1.921 1.00 43.43 C
ATOM 12 O2' U A 39 -9.998 58.889 -1.719 1.00 43.20 O
ATOM 13 C1' U A 39 -8.225 60.143 -0.602 1.00 43.91 C
ATOM 14 N1 U A 39 -8.966 61.179 0.212 1.00 44.03 N
ATOM 15 C2 U A 39 -9.831 60.763 1.216 1.00 44.01 C
ATOM 16 O2 U A 39 -10.045 59.592 1.482 1.00 43.99 O
ATOM 17 N3 U A 39 -10.450 61.777 1.913 1.00 44.03 N
ATOM 18 C4 U A 39 -10.297 63.140 1.715 1.00 44.38 C
ATOM 19 O4 U A 39 -10.920 63.935 2.416 1.00 44.61 O
ATOM 20 C5 U A 39 -9.380 63.498 0.658 1.00 44.38 C
ATOM 21 C6 U A 39 -8.762 62.528 -0.034 1.00 44.21 C
ATOM 22 P C A 40 -6.618 56.501 -2.695 1.00 39.80 P
ATOM 23 OP1 C A 40 -5.823 57.136 -3.770 1.00 39.93 O
ATOM 24 OP2 C A 40 -7.545 55.401 -3.027 1.00 39.91 O
ATOM 25 O5' C A 40 -5.593 55.970 -1.586 1.00 38.13 O
TER
ATOM 1 O3' A B 50 -17.946 56.262 7.813 1.00 32.64 O
ATOM 2 P U B 51 -18.635 57.338 6.838 1.00 34.23 P
ATOM 3 OP1 U B 51 -19.663 58.096 7.592 1.00 33.98 O
ATOM 4 OP2 U B 51 -19.043 56.652 5.593 1.00 34.13 O
ATOM 5 O5' U B 51 -17.407 58.310 6.506 1.00 34.47 O
ATOM 6 C5' U B 51 -16.921 59.197 7.517 1.00 35.04 C
ATOM 7 C4' U B 51 -16.360 60.486 6.941 1.00 35.14 C
ATOM 8 O4' U B 51 -15.055 60.205 6.382 1.00 35.62 O
ATOM 9 C3' U B 51 -17.194 61.165 5.841 1.00 35.17 C
ATOM 10 O3' U B 51 -17.720 62.493 6.182 1.00 34.69 O
ATOM 11 C2' U B 51 -16.332 61.076 4.571 1.00 35.44 C
ATOM 12 O2' U B 51 -16.286 62.266 3.809 1.00 36.38 O
ATOM 13 C1' U B 51 -14.934 60.730 5.077 1.00 35.75 C
ATOM 14 N1 U B 51 -14.218 59.717 4.227 1.00 36.23 N
ATOM 15 C2 U B 51 -13.035 60.070 3.594 1.00 36.33 C
ATOM 16 O2 U B 51 -12.521 61.173 3.679 1.00 36.56 O
ATOM 17 N3 U B 51 -12.463 59.066 2.842 1.00 36.04 N
ATOM 18 C4 U B 51 -12.942 57.777 2.662 1.00 35.65 C
ATOM 19 O4 U B 51 -12.321 56.995 1.955 1.00 35.31 O
ATOM 20 C5 U B 51 -14.175 57.479 3.349 1.00 35.89 C
ATOM 21 C6 U B 51 -14.749 58.440 4.089 1.00 36.25 C
ATOM 22 P C B 52 -16.924 63.774 6.750 1.00 34.15 P
ATOM 23 OP1 C B 52 -17.405 64.938 5.974 1.00 33.84 O
ATOM 24 OP2 C B 52 -15.467 63.504 6.812 1.00 34.49 O
ATOM 25 O5' C B 52 -17.495 63.913 8.241 1.00 33.48 O
TER
ATOM 2 P U A 39 -6.607 63.250 -3.856 1.00 48.58 P
ATOM 3 OP1 U A 39 -5.192 63.313 -4.295 1.00 49.01 O
ATOM 4 OP2 U A 39 -7.672 63.840 -4.701 1.00 48.75 O
ATOM 5 O5' U A 39 -6.985 61.722 -3.582 1.00 47.22 O
ATOM 6 C5' U A 39 -5.982 60.777 -3.216 1.00 45.65 C
ATOM 7 C4' U A 39 -6.490 59.850 -2.123 1.00 44.21 C
ATOM 8 O4' U A 39 -6.947 60.625 -0.981 1.00 44.16 O
ATOM 9 C3' U A 39 -7.661 58.950 -2.522 1.00 43.11 C
ATOM 10 O3' U A 39 -7.474 57.643 -1.957 1.00 41.30 O
ATOM 11 C2' U A 39 -8.857 59.699 -1.921 1.00 43.43 C
ATOM 12 O2' U A 39 -9.998 58.889 -1.719 1.00 43.20 O
ATOM 13 C1' U A 39 -8.225 60.143 -0.602 1.00 43.91 C
ATOM 14 N1 U A 39 -8.966 61.179 0.212 1.00 44.03 N
ATOM 15 C2 U A 39 -9.831 60.763 1.216 1.00 44.01 C
ATOM 16 O2 U A 39 -10.045 59.592 1.482 1.00 43.99 O
ATOM 17 N3 U A 39 -10.450 61.777 1.913 1.00 44.03 N
ATOM 18 C4 U A 39 -10.297 63.140 1.715 1.00 44.38 C
ATOM 19 O4 U A 39 -10.920 63.935 2.416 1.00 44.61 O
ATOM 20 C5 U A 39 -9.380 63.498 0.658 1.00 44.38 C
ATOM 21 C6 U A 39 -8.762 62.528 -0.034 1.00 44.21 C
ATOM 22 P C A 40 -6.618 56.501 -2.695 1.00 39.80 P
ATOM 23 OP1 C A 40 -5.823 57.136 -3.770 1.00 39.93 O
ATOM 24 OP2 C A 40 -7.545 55.401 -3.027 1.00 39.91 O
ATOM 25 O5' C A 40 -5.593 55.970 -1.586 1.00 38.13 O
TER
ATOM 1 O3' A B 50 -17.946 56.262 7.813 1.00 32.64 O
ATOM 2 P U B 51 -18.635 57.338 6.838 1.00 34.23 P
ATOM 3 OP1 U B 51 -19.663 58.096 7.592 1.00 33.98 O
ATOM 4 OP2 U B 51 -19.043 56.652 5.593 1.00 34.13 O
ATOM 5 O5' U B 51 -17.407 58.310 6.506 1.00 34.47 O
ATOM 6 C5' U B 51 -16.921 59.197 7.517 1.00 35.04 C
ATOM 7 C4' U B 51 -16.360 60.486 6.941 1.00 35.14 C
ATOM 8 O4' U B 51 -15.055 60.205 6.382 1.00 35.62 O
ATOM 9 C3' U B 51 -17.194 61.165 5.841 1.00 35.17 C
ATOM 10 O3' U B 51 -17.720 62.493 6.182 1.00 34.69 O
ATOM 11 C2' U B 51 -16.332 61.076 4.571 1.00 35.44 C
ATOM 12 O2' U B 51 -16.286 62.266 3.809 1.00 36.38 O
ATOM 13 C1' U B 51 -14.934 60.730 5.077 1.00 35.75 C
ATOM 14 N1 U B 51 -14.218 59.717 4.227 1.00 36.23 N
ATOM 15 C2 U B 51 -13.035 60.070 3.594 1.00 36.33 C
ATOM 16 O2 U B 51 -12.521 61.173 3.679 1.00 36.56 O
ATOM 17 N3 U B 51 -12.463 59.066 2.842 1.00 36.04 N
ATOM 18 C4 U B 51 -12.942 57.777 2.662 1.00 35.65 C
ATOM 19 O4 U B 51 -12.321 56.995 1.955 1.00 35.31 O
ATOM 20 C5 U B 51 -14.175 57.479 3.349 1.00 35.89 C
ATOM 21 C6 U B 51 -14.749 58.440 4.089 1.00 36.25 C
ATOM 22 P C B 52 -16.924 63.774 6.750 1.00 34.15 P
ATOM 23 OP1 C B 52 -17.405 64.938 5.974 1.00 33.84 O
ATOM 24 OP2 C B 52 -15.467 63.504 6.812 1.00 34.49 O
ATOM 25 O5' C B 52 -17.495 63.913 8.241 1.00 33.48 O
TER
Atoms:
C4: (-10.297,63.140,1.715)
N3: (-10.450,61.777,1.913)
OP1: (-5.192,63.313,-4.295)
OP2: (-7.672,63.840,-4.701)
C2: (-9.831,60.763,1.216)
C1': (-8.225,60.143,-0.602)
C3': (-7.661,58.950,-2.522)
O5': (-6.985,61.722,-3.582)
O4': (-6.947,60.625,-0.981)
C5': (-5.982,60.777,-3.216)
P: (-6.607,63.250,-3.856)
C4': (-6.490,59.850,-2.123)
C2': (-8.857,59.699,-1.921)
O2': (-9.998,58.889,-1.719)
N1: (-8.966,61.179,0.212)
O4: (-10.920,63.935,2.416)
O2: (-10.045,59.592,1.482)
C6: (-8.762,62.528,-0.034)
C5: (-9.380,63.498,0.658)
O3': (-7.474,57.643,-1.957)
N3: (-10.450,61.777,1.913)
OP1: (-5.192,63.313,-4.295)
OP2: (-7.672,63.840,-4.701)
C2: (-9.831,60.763,1.216)
C1': (-8.225,60.143,-0.602)
C3': (-7.661,58.950,-2.522)
O5': (-6.985,61.722,-3.582)
O4': (-6.947,60.625,-0.981)
C5': (-5.982,60.777,-3.216)
P: (-6.607,63.250,-3.856)
C4': (-6.490,59.850,-2.123)
C2': (-8.857,59.699,-1.921)
O2': (-9.998,58.889,-1.719)
N1: (-8.966,61.179,0.212)
O4: (-10.920,63.935,2.416)
O2: (-10.045,59.592,1.482)
C6: (-8.762,62.528,-0.034)
C5: (-9.380,63.498,0.658)
O3': (-7.474,57.643,-1.957)
C4: (-12.942,57.777,2.662)
N3: (-12.463,59.066,2.842)
OP1: (-19.663,58.096,7.592)
OP2: (-19.043,56.652,5.593)
C2: (-13.035,60.070,3.594)
C1': (-14.934,60.730,5.077)
C3': (-17.194,61.165,5.841)
O5': (-17.407,58.310,6.506)
O4': (-15.055,60.205,6.382)
C5': (-16.921,59.197,7.517)
P: (-18.635,57.338,6.838)
C4': (-16.360,60.486,6.941)
C2': (-16.332,61.076,4.571)
O2': (-16.286,62.266,3.809)
N1: (-14.218,59.717,4.227)
O4: (-12.321,56.995,1.955)
O2: (-12.521,61.173,3.679)
C6: (-14.749,58.440,4.089)
C5: (-14.175,57.479,3.349)
O3': (-17.720,62.493,6.182)
N3: (-12.463,59.066,2.842)
OP1: (-19.663,58.096,7.592)
OP2: (-19.043,56.652,5.593)
C2: (-13.035,60.070,3.594)
C1': (-14.934,60.730,5.077)
C3': (-17.194,61.165,5.841)
O5': (-17.407,58.310,6.506)
O4': (-15.055,60.205,6.382)
C5': (-16.921,59.197,7.517)
P: (-18.635,57.338,6.838)
C4': (-16.360,60.486,6.941)
C2': (-16.332,61.076,4.571)
O2': (-16.286,62.266,3.809)
N1: (-14.218,59.717,4.227)
O4: (-12.321,56.995,1.955)
O2: (-12.521,61.173,3.679)
C6: (-14.749,58.440,4.089)
C5: (-14.175,57.479,3.349)
O3': (-17.720,62.493,6.182)
Image (generated by PyMOL):