Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIO:X39:X51
Extra
PDB:
ATOM 1 O3' A A 38 -8.153 62.961 -2.123 1.00 76.37 O
ATOM 2 P U A 39 -8.136 62.483 -3.655 1.00 74.61 P
ATOM 3 OP1 U A 39 -6.819 62.820 -4.249 1.00 74.70 O
ATOM 4 OP2 U A 39 -9.379 62.990 -4.280 1.00 74.72 O
ATOM 5 O5' U A 39 -8.280 60.891 -3.560 1.00 72.19 O
ATOM 6 C5' U A 39 -7.234 60.064 -3.046 1.00 68.22 C
ATOM 7 C4' U A 39 -7.765 59.091 -2.002 1.00 65.14 C
ATOM 8 O4' U A 39 -8.220 59.831 -0.837 1.00 64.38 O
ATOM 9 C3' U A 39 -8.941 58.200 -2.422 1.00 63.24 C
ATOM 10 O3' U A 39 -8.767 56.868 -1.924 1.00 60.64 O
ATOM 11 C2' U A 39 -10.131 58.867 -1.733 1.00 63.32 C
ATOM 12 O2' U A 39 -11.199 57.967 -1.504 1.00 63.11 O
ATOM 13 C1' U A 39 -9.458 59.282 -0.426 1.00 63.62 C
ATOM 14 N1 U A 39 -10.214 60.250 0.454 1.00 63.34 N
ATOM 15 C2 U A 39 -11.115 59.758 1.389 1.00 63.16 C
ATOM 16 O2 U A 39 -11.355 58.573 1.557 1.00 62.76 O
ATOM 17 N3 U A 39 -11.746 60.718 2.144 1.00 63.22 N
ATOM 18 C4 U A 39 -11.578 62.089 2.070 1.00 63.30 C
ATOM 19 O4 U A 39 -12.220 62.817 2.820 1.00 63.35 O
ATOM 20 C5 U A 39 -10.625 62.528 1.079 1.00 63.32 C
ATOM 21 C6 U A 39 -9.993 61.614 0.328 1.00 63.42 C
ATOM 22 P C A 40 -7.986 55.706 -2.709 1.00 58.35 P
ATOM 23 OP1 C A 40 -7.357 56.271 -3.925 1.00 58.38 O
ATOM 24 OP2 C A 40 -8.922 54.568 -2.822 1.00 58.07 O
ATOM 25 O5' C A 40 -6.804 55.307 -1.701 1.00 56.19 O
TER
ATOM 1 O3' A B 50 -19.036 55.065 7.811 1.00 50.68 O
ATOM 2 P U B 51 -19.738 56.172 6.881 1.00 51.56 P
ATOM 3 OP1 U B 51 -20.804 56.807 7.690 1.00 52.22 O
ATOM 4 OP2 U B 51 -20.086 55.563 5.574 1.00 51.47 O
ATOM 5 O5' U B 51 -18.554 57.222 6.643 1.00 51.53 O
ATOM 6 C5' U B 51 -18.312 58.265 7.579 1.00 52.07 C
ATOM 7 C4' U B 51 -17.486 59.360 6.935 1.00 52.55 C
ATOM 8 O4' U B 51 -16.249 58.765 6.484 1.00 52.40 O
ATOM 9 C3' U B 51 -18.124 60.008 5.701 1.00 53.16 C
ATOM 10 O3' U B 51 -18.883 61.228 5.977 1.00 54.16 O
ATOM 11 C2' U B 51 -16.993 60.125 4.663 1.00 52.89 C
ATOM 12 O2' U B 51 -16.618 61.454 4.347 1.00 53.13 O
ATOM 13 C1' U B 51 -15.809 59.384 5.292 1.00 52.36 C
ATOM 14 N1 U B 51 -15.204 58.349 4.378 1.00 51.74 N
ATOM 15 C2 U B 51 -14.049 58.657 3.670 1.00 51.42 C
ATOM 16 O2 U B 51 -13.475 59.730 3.742 1.00 50.83 O
ATOM 17 N3 U B 51 -13.580 57.650 2.859 1.00 51.45 N
ATOM 18 C4 U B 51 -14.137 56.392 2.684 1.00 51.66 C
ATOM 19 O4 U B 51 -13.604 55.592 1.920 1.00 51.83 O
ATOM 20 C5 U B 51 -15.336 56.143 3.450 1.00 51.61 C
ATOM 21 C6 U B 51 -15.813 57.109 4.249 1.00 51.54 C
ATOM 22 P C B 52 -18.406 62.550 6.762 1.00 54.94 P
ATOM 23 OP1 C B 52 -19.345 63.620 6.356 1.00 54.74 O
ATOM 24 OP2 C B 52 -16.950 62.761 6.569 1.00 54.81 O
ATOM 25 O5' C B 52 -18.708 62.205 8.299 1.00 54.47 O
TER
ATOM 2 P U A 39 -8.136 62.483 -3.655 1.00 74.61 P
ATOM 3 OP1 U A 39 -6.819 62.820 -4.249 1.00 74.70 O
ATOM 4 OP2 U A 39 -9.379 62.990 -4.280 1.00 74.72 O
ATOM 5 O5' U A 39 -8.280 60.891 -3.560 1.00 72.19 O
ATOM 6 C5' U A 39 -7.234 60.064 -3.046 1.00 68.22 C
ATOM 7 C4' U A 39 -7.765 59.091 -2.002 1.00 65.14 C
ATOM 8 O4' U A 39 -8.220 59.831 -0.837 1.00 64.38 O
ATOM 9 C3' U A 39 -8.941 58.200 -2.422 1.00 63.24 C
ATOM 10 O3' U A 39 -8.767 56.868 -1.924 1.00 60.64 O
ATOM 11 C2' U A 39 -10.131 58.867 -1.733 1.00 63.32 C
ATOM 12 O2' U A 39 -11.199 57.967 -1.504 1.00 63.11 O
ATOM 13 C1' U A 39 -9.458 59.282 -0.426 1.00 63.62 C
ATOM 14 N1 U A 39 -10.214 60.250 0.454 1.00 63.34 N
ATOM 15 C2 U A 39 -11.115 59.758 1.389 1.00 63.16 C
ATOM 16 O2 U A 39 -11.355 58.573 1.557 1.00 62.76 O
ATOM 17 N3 U A 39 -11.746 60.718 2.144 1.00 63.22 N
ATOM 18 C4 U A 39 -11.578 62.089 2.070 1.00 63.30 C
ATOM 19 O4 U A 39 -12.220 62.817 2.820 1.00 63.35 O
ATOM 20 C5 U A 39 -10.625 62.528 1.079 1.00 63.32 C
ATOM 21 C6 U A 39 -9.993 61.614 0.328 1.00 63.42 C
ATOM 22 P C A 40 -7.986 55.706 -2.709 1.00 58.35 P
ATOM 23 OP1 C A 40 -7.357 56.271 -3.925 1.00 58.38 O
ATOM 24 OP2 C A 40 -8.922 54.568 -2.822 1.00 58.07 O
ATOM 25 O5' C A 40 -6.804 55.307 -1.701 1.00 56.19 O
TER
ATOM 1 O3' A B 50 -19.036 55.065 7.811 1.00 50.68 O
ATOM 2 P U B 51 -19.738 56.172 6.881 1.00 51.56 P
ATOM 3 OP1 U B 51 -20.804 56.807 7.690 1.00 52.22 O
ATOM 4 OP2 U B 51 -20.086 55.563 5.574 1.00 51.47 O
ATOM 5 O5' U B 51 -18.554 57.222 6.643 1.00 51.53 O
ATOM 6 C5' U B 51 -18.312 58.265 7.579 1.00 52.07 C
ATOM 7 C4' U B 51 -17.486 59.360 6.935 1.00 52.55 C
ATOM 8 O4' U B 51 -16.249 58.765 6.484 1.00 52.40 O
ATOM 9 C3' U B 51 -18.124 60.008 5.701 1.00 53.16 C
ATOM 10 O3' U B 51 -18.883 61.228 5.977 1.00 54.16 O
ATOM 11 C2' U B 51 -16.993 60.125 4.663 1.00 52.89 C
ATOM 12 O2' U B 51 -16.618 61.454 4.347 1.00 53.13 O
ATOM 13 C1' U B 51 -15.809 59.384 5.292 1.00 52.36 C
ATOM 14 N1 U B 51 -15.204 58.349 4.378 1.00 51.74 N
ATOM 15 C2 U B 51 -14.049 58.657 3.670 1.00 51.42 C
ATOM 16 O2 U B 51 -13.475 59.730 3.742 1.00 50.83 O
ATOM 17 N3 U B 51 -13.580 57.650 2.859 1.00 51.45 N
ATOM 18 C4 U B 51 -14.137 56.392 2.684 1.00 51.66 C
ATOM 19 O4 U B 51 -13.604 55.592 1.920 1.00 51.83 O
ATOM 20 C5 U B 51 -15.336 56.143 3.450 1.00 51.61 C
ATOM 21 C6 U B 51 -15.813 57.109 4.249 1.00 51.54 C
ATOM 22 P C B 52 -18.406 62.550 6.762 1.00 54.94 P
ATOM 23 OP1 C B 52 -19.345 63.620 6.356 1.00 54.74 O
ATOM 24 OP2 C B 52 -16.950 62.761 6.569 1.00 54.81 O
ATOM 25 O5' C B 52 -18.708 62.205 8.299 1.00 54.47 O
TER
Atoms:
C4: (-11.578,62.089,2.070)
N3: (-11.746,60.718,2.144)
OP1: (-6.819,62.820,-4.249)
OP2: (-9.379,62.990,-4.280)
C2: (-11.115,59.758,1.389)
C1': (-9.458,59.282,-0.426)
C3': (-8.941,58.200,-2.422)
O5': (-8.280,60.891,-3.560)
O4': (-8.220,59.831,-0.837)
C5': (-7.234,60.064,-3.046)
P: (-8.136,62.483,-3.655)
C4': (-7.765,59.091,-2.002)
C2': (-10.131,58.867,-1.733)
O2': (-11.199,57.967,-1.504)
N1: (-10.214,60.250,0.454)
O4: (-12.220,62.817,2.820)
O2: (-11.355,58.573,1.557)
C6: (-9.993,61.614,0.328)
C5: (-10.625,62.528,1.079)
O3': (-8.767,56.868,-1.924)
N3: (-11.746,60.718,2.144)
OP1: (-6.819,62.820,-4.249)
OP2: (-9.379,62.990,-4.280)
C2: (-11.115,59.758,1.389)
C1': (-9.458,59.282,-0.426)
C3': (-8.941,58.200,-2.422)
O5': (-8.280,60.891,-3.560)
O4': (-8.220,59.831,-0.837)
C5': (-7.234,60.064,-3.046)
P: (-8.136,62.483,-3.655)
C4': (-7.765,59.091,-2.002)
C2': (-10.131,58.867,-1.733)
O2': (-11.199,57.967,-1.504)
N1: (-10.214,60.250,0.454)
O4: (-12.220,62.817,2.820)
O2: (-11.355,58.573,1.557)
C6: (-9.993,61.614,0.328)
C5: (-10.625,62.528,1.079)
O3': (-8.767,56.868,-1.924)
C4: (-14.137,56.392,2.684)
N3: (-13.580,57.650,2.859)
OP1: (-20.804,56.807,7.690)
OP2: (-20.086,55.563,5.574)
C2: (-14.049,58.657,3.670)
C1': (-15.809,59.384,5.292)
C3': (-18.124,60.008,5.701)
O5': (-18.554,57.222,6.643)
O4': (-16.249,58.765,6.484)
C5': (-18.312,58.265,7.579)
P: (-19.738,56.172,6.881)
C4': (-17.486,59.360,6.935)
C2': (-16.993,60.125,4.663)
O2': (-16.618,61.454,4.347)
N1: (-15.204,58.349,4.378)
O4: (-13.604,55.592,1.920)
O2: (-13.475,59.730,3.742)
C6: (-15.813,57.109,4.249)
C5: (-15.336,56.143,3.450)
O3': (-18.883,61.228,5.977)
N3: (-13.580,57.650,2.859)
OP1: (-20.804,56.807,7.690)
OP2: (-20.086,55.563,5.574)
C2: (-14.049,58.657,3.670)
C1': (-15.809,59.384,5.292)
C3': (-18.124,60.008,5.701)
O5': (-18.554,57.222,6.643)
O4': (-16.249,58.765,6.484)
C5': (-18.312,58.265,7.579)
P: (-19.738,56.172,6.881)
C4': (-17.486,59.360,6.935)
C2': (-16.993,60.125,4.663)
O2': (-16.618,61.454,4.347)
N1: (-15.204,58.349,4.378)
O4: (-13.604,55.592,1.920)
O2: (-13.475,59.730,3.742)
C6: (-15.813,57.109,4.249)
C5: (-15.336,56.143,3.450)
O3': (-18.883,61.228,5.977)
Image (generated by PyMOL):