Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIX:A39:A51
Extra
PDB:
ATOM 1 O3' A A 38 -7.494 63.819 -2.435 1.00 56.25 O
ATOM 2 P U A 39 -7.677 63.242 -3.920 1.00 55.40 P
ATOM 3 OP1 U A 39 -6.467 63.568 -4.710 1.00 55.70 O
ATOM 4 OP2 U A 39 -9.006 63.684 -4.397 1.00 55.41 O
ATOM 5 O5' U A 39 -7.743 61.656 -3.714 1.00 54.28 O
ATOM 6 C5' U A 39 -6.650 60.909 -3.168 1.00 52.48 C
ATOM 7 C4' U A 39 -7.127 59.902 -2.125 1.00 51.00 C
ATOM 8 O4' U A 39 -7.520 60.597 -0.908 1.00 50.77 O
ATOM 9 C3' U A 39 -8.330 59.031 -2.503 1.00 50.06 C
ATOM 10 O3' U A 39 -8.198 57.734 -1.908 1.00 48.55 O
ATOM 11 C2' U A 39 -9.489 59.811 -1.878 1.00 50.32 C
ATOM 12 O2' U A 39 -10.654 59.028 -1.699 1.00 50.45 O
ATOM 13 C1' U A 39 -8.831 60.190 -0.549 1.00 50.45 C
ATOM 14 N1 U A 39 -9.513 61.248 0.295 1.00 50.12 N
ATOM 15 C2 U A 39 -10.321 60.856 1.354 1.00 49.88 C
ATOM 16 O2 U A 39 -10.532 59.695 1.654 1.00 49.89 O
ATOM 17 N3 U A 39 -10.890 61.881 2.072 1.00 49.84 N
ATOM 18 C4 U A 39 -10.736 63.237 1.845 1.00 50.19 C
ATOM 19 O4 U A 39 -11.312 64.041 2.572 1.00 50.40 O
ATOM 20 C5 U A 39 -9.881 63.575 0.732 1.00 50.31 C
ATOM 21 C6 U A 39 -9.313 62.591 0.017 1.00 50.20 C
ATOM 22 P C A 40 -7.566 56.463 -2.660 1.00 47.25 P
ATOM 23 OP1 C A 40 -6.971 56.910 -3.942 1.00 47.23 O
ATOM 24 OP2 C A 40 -8.599 55.402 -2.643 1.00 47.01 O
ATOM 25 O5' C A 40 -6.362 56.017 -1.703 1.00 45.18 O
TER
ATOM 1 O3' A B 50 -18.496 56.313 7.869 1.00 30.72 O
ATOM 2 P U B 51 -19.179 57.389 6.882 1.00 31.92 P
ATOM 3 OP1 U B 51 -20.232 58.125 7.622 1.00 31.80 O
ATOM 4 OP2 U B 51 -19.545 56.726 5.610 1.00 31.69 O
ATOM 5 O5' U B 51 -17.952 58.374 6.607 1.00 31.92 O
ATOM 6 C5' U B 51 -17.509 59.247 7.636 1.00 32.01 C
ATOM 7 C4' U B 51 -16.928 60.511 7.039 1.00 32.02 C
ATOM 8 O4' U B 51 -15.621 60.181 6.519 1.00 32.27 O
ATOM 9 C3' U B 51 -17.730 61.127 5.886 1.00 32.33 C
ATOM 10 O3' U B 51 -18.301 62.452 6.159 1.00 33.06 O
ATOM 11 C2' U B 51 -16.813 61.013 4.655 1.00 32.11 C
ATOM 12 O2' U B 51 -16.760 62.171 3.847 1.00 32.92 O
ATOM 13 C1' U B 51 -15.431 60.734 5.234 1.00 31.89 C
ATOM 14 N1 U B 51 -14.601 59.792 4.386 1.00 31.94 N
ATOM 15 C2 U B 51 -13.507 60.290 3.692 1.00 31.72 C
ATOM 16 O2 U B 51 -13.153 61.458 3.719 1.00 31.92 O
ATOM 17 N3 U B 51 -12.825 59.356 2.948 1.00 31.21 N
ATOM 18 C4 U B 51 -13.114 58.009 2.820 1.00 30.80 C
ATOM 19 O4 U B 51 -12.402 57.309 2.108 1.00 30.96 O
ATOM 20 C5 U B 51 -14.263 57.559 3.566 1.00 30.66 C
ATOM 21 C6 U B 51 -14.944 58.447 4.304 1.00 31.26 C
ATOM 22 P C B 52 -17.576 63.730 6.816 1.00 33.13 P
ATOM 23 OP1 C B 52 -18.141 64.921 6.143 1.00 32.45 O
ATOM 24 OP2 C B 52 -16.106 63.520 6.840 1.00 33.19 O
ATOM 25 O5' C B 52 -18.121 63.736 8.322 1.00 33.01 O
TER
ATOM 2 P U A 39 -7.677 63.242 -3.920 1.00 55.40 P
ATOM 3 OP1 U A 39 -6.467 63.568 -4.710 1.00 55.70 O
ATOM 4 OP2 U A 39 -9.006 63.684 -4.397 1.00 55.41 O
ATOM 5 O5' U A 39 -7.743 61.656 -3.714 1.00 54.28 O
ATOM 6 C5' U A 39 -6.650 60.909 -3.168 1.00 52.48 C
ATOM 7 C4' U A 39 -7.127 59.902 -2.125 1.00 51.00 C
ATOM 8 O4' U A 39 -7.520 60.597 -0.908 1.00 50.77 O
ATOM 9 C3' U A 39 -8.330 59.031 -2.503 1.00 50.06 C
ATOM 10 O3' U A 39 -8.198 57.734 -1.908 1.00 48.55 O
ATOM 11 C2' U A 39 -9.489 59.811 -1.878 1.00 50.32 C
ATOM 12 O2' U A 39 -10.654 59.028 -1.699 1.00 50.45 O
ATOM 13 C1' U A 39 -8.831 60.190 -0.549 1.00 50.45 C
ATOM 14 N1 U A 39 -9.513 61.248 0.295 1.00 50.12 N
ATOM 15 C2 U A 39 -10.321 60.856 1.354 1.00 49.88 C
ATOM 16 O2 U A 39 -10.532 59.695 1.654 1.00 49.89 O
ATOM 17 N3 U A 39 -10.890 61.881 2.072 1.00 49.84 N
ATOM 18 C4 U A 39 -10.736 63.237 1.845 1.00 50.19 C
ATOM 19 O4 U A 39 -11.312 64.041 2.572 1.00 50.40 O
ATOM 20 C5 U A 39 -9.881 63.575 0.732 1.00 50.31 C
ATOM 21 C6 U A 39 -9.313 62.591 0.017 1.00 50.20 C
ATOM 22 P C A 40 -7.566 56.463 -2.660 1.00 47.25 P
ATOM 23 OP1 C A 40 -6.971 56.910 -3.942 1.00 47.23 O
ATOM 24 OP2 C A 40 -8.599 55.402 -2.643 1.00 47.01 O
ATOM 25 O5' C A 40 -6.362 56.017 -1.703 1.00 45.18 O
TER
ATOM 1 O3' A B 50 -18.496 56.313 7.869 1.00 30.72 O
ATOM 2 P U B 51 -19.179 57.389 6.882 1.00 31.92 P
ATOM 3 OP1 U B 51 -20.232 58.125 7.622 1.00 31.80 O
ATOM 4 OP2 U B 51 -19.545 56.726 5.610 1.00 31.69 O
ATOM 5 O5' U B 51 -17.952 58.374 6.607 1.00 31.92 O
ATOM 6 C5' U B 51 -17.509 59.247 7.636 1.00 32.01 C
ATOM 7 C4' U B 51 -16.928 60.511 7.039 1.00 32.02 C
ATOM 8 O4' U B 51 -15.621 60.181 6.519 1.00 32.27 O
ATOM 9 C3' U B 51 -17.730 61.127 5.886 1.00 32.33 C
ATOM 10 O3' U B 51 -18.301 62.452 6.159 1.00 33.06 O
ATOM 11 C2' U B 51 -16.813 61.013 4.655 1.00 32.11 C
ATOM 12 O2' U B 51 -16.760 62.171 3.847 1.00 32.92 O
ATOM 13 C1' U B 51 -15.431 60.734 5.234 1.00 31.89 C
ATOM 14 N1 U B 51 -14.601 59.792 4.386 1.00 31.94 N
ATOM 15 C2 U B 51 -13.507 60.290 3.692 1.00 31.72 C
ATOM 16 O2 U B 51 -13.153 61.458 3.719 1.00 31.92 O
ATOM 17 N3 U B 51 -12.825 59.356 2.948 1.00 31.21 N
ATOM 18 C4 U B 51 -13.114 58.009 2.820 1.00 30.80 C
ATOM 19 O4 U B 51 -12.402 57.309 2.108 1.00 30.96 O
ATOM 20 C5 U B 51 -14.263 57.559 3.566 1.00 30.66 C
ATOM 21 C6 U B 51 -14.944 58.447 4.304 1.00 31.26 C
ATOM 22 P C B 52 -17.576 63.730 6.816 1.00 33.13 P
ATOM 23 OP1 C B 52 -18.141 64.921 6.143 1.00 32.45 O
ATOM 24 OP2 C B 52 -16.106 63.520 6.840 1.00 33.19 O
ATOM 25 O5' C B 52 -18.121 63.736 8.322 1.00 33.01 O
TER
Atoms:
C4: (-10.736,63.237,1.845)
N3: (-10.890,61.881,2.072)
OP1: (-6.467,63.568,-4.710)
OP2: (-9.006,63.684,-4.397)
C2: (-10.321,60.856,1.354)
C1': (-8.831,60.190,-0.549)
C3': (-8.330,59.031,-2.503)
O5': (-7.743,61.656,-3.714)
O4': (-7.520,60.597,-0.908)
C5': (-6.650,60.909,-3.168)
P: (-7.677,63.242,-3.920)
C4': (-7.127,59.902,-2.125)
C2': (-9.489,59.811,-1.878)
O2': (-10.654,59.028,-1.699)
N1: (-9.513,61.248,0.295)
O4: (-11.312,64.041,2.572)
O2: (-10.532,59.695,1.654)
C6: (-9.313,62.591,0.017)
C5: (-9.881,63.575,0.732)
O3': (-8.198,57.734,-1.908)
N3: (-10.890,61.881,2.072)
OP1: (-6.467,63.568,-4.710)
OP2: (-9.006,63.684,-4.397)
C2: (-10.321,60.856,1.354)
C1': (-8.831,60.190,-0.549)
C3': (-8.330,59.031,-2.503)
O5': (-7.743,61.656,-3.714)
O4': (-7.520,60.597,-0.908)
C5': (-6.650,60.909,-3.168)
P: (-7.677,63.242,-3.920)
C4': (-7.127,59.902,-2.125)
C2': (-9.489,59.811,-1.878)
O2': (-10.654,59.028,-1.699)
N1: (-9.513,61.248,0.295)
O4: (-11.312,64.041,2.572)
O2: (-10.532,59.695,1.654)
C6: (-9.313,62.591,0.017)
C5: (-9.881,63.575,0.732)
O3': (-8.198,57.734,-1.908)
C4: (-13.114,58.009,2.820)
N3: (-12.825,59.356,2.948)
OP1: (-20.232,58.125,7.622)
OP2: (-19.545,56.726,5.610)
C2: (-13.507,60.290,3.692)
C1': (-15.431,60.734,5.234)
C3': (-17.730,61.127,5.886)
O5': (-17.952,58.374,6.607)
O4': (-15.621,60.181,6.519)
C5': (-17.509,59.247,7.636)
P: (-19.179,57.389,6.882)
C4': (-16.928,60.511,7.039)
C2': (-16.813,61.013,4.655)
O2': (-16.760,62.171,3.847)
N1: (-14.601,59.792,4.386)
O4: (-12.402,57.309,2.108)
O2: (-13.153,61.458,3.719)
C6: (-14.944,58.447,4.304)
C5: (-14.263,57.559,3.566)
O3': (-18.301,62.452,6.159)
N3: (-12.825,59.356,2.948)
OP1: (-20.232,58.125,7.622)
OP2: (-19.545,56.726,5.610)
C2: (-13.507,60.290,3.692)
C1': (-15.431,60.734,5.234)
C3': (-17.730,61.127,5.886)
O5': (-17.952,58.374,6.607)
O4': (-15.621,60.181,6.519)
C5': (-17.509,59.247,7.636)
P: (-19.179,57.389,6.882)
C4': (-16.928,60.511,7.039)
C2': (-16.813,61.013,4.655)
O2': (-16.760,62.171,3.847)
N1: (-14.601,59.792,4.386)
O4: (-12.402,57.309,2.108)
O2: (-13.153,61.458,3.719)
C6: (-14.944,58.447,4.304)
C5: (-14.263,57.559,3.566)
O3': (-18.301,62.452,6.159)
Image (generated by PyMOL):