Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIY:A39:A51
Extra
PDB:
ATOM 1 O3' A A 38 -7.210 63.980 -1.679 1.00 57.12 O
ATOM 2 P U A 39 -7.223 63.485 -3.202 1.00 55.94 P
ATOM 3 OP1 U A 39 -5.850 63.600 -3.749 1.00 56.08 O
ATOM 4 OP2 U A 39 -8.341 64.182 -3.877 1.00 55.88 O
ATOM 5 O5' U A 39 -7.613 61.935 -3.077 1.00 54.56 O
ATOM 6 C5' U A 39 -6.629 60.936 -2.779 1.00 52.38 C
ATOM 7 C4' U A 39 -7.156 59.877 -1.815 1.00 50.74 C
ATOM 8 O4' U A 39 -7.529 60.486 -0.549 1.00 50.56 O
ATOM 9 C3' U A 39 -8.384 59.085 -2.268 1.00 49.58 C
ATOM 10 O3' U A 39 -8.291 57.732 -1.808 1.00 47.54 O
ATOM 11 C2' U A 39 -9.524 59.824 -1.568 1.00 49.93 C
ATOM 12 O2' U A 39 -10.685 59.031 -1.414 1.00 49.95 O
ATOM 13 C1' U A 39 -8.856 60.107 -0.223 1.00 50.35 C
ATOM 14 N1 U A 39 -9.504 61.161 0.641 1.00 50.43 N
ATOM 15 C2 U A 39 -10.358 60.772 1.665 1.00 50.42 C
ATOM 16 O2 U A 39 -10.637 59.612 1.917 1.00 50.19 O
ATOM 17 N3 U A 39 -10.890 61.808 2.400 1.00 50.56 N
ATOM 18 C4 U A 39 -10.662 63.164 2.223 1.00 50.62 C
ATOM 19 O4 U A 39 -11.212 63.973 2.963 1.00 50.60 O
ATOM 20 C5 U A 39 -9.762 63.495 1.144 1.00 50.57 C
ATOM 21 C6 U A 39 -9.231 62.503 0.413 1.00 50.55 C
ATOM 22 P C A 40 -7.570 56.569 -2.643 1.00 45.81 P
ATOM 23 OP1 C A 40 -7.109 57.132 -3.933 1.00 45.46 O
ATOM 24 OP2 C A 40 -8.469 55.393 -2.620 1.00 45.50 O
ATOM 25 O5' C A 40 -6.273 56.232 -1.766 1.00 44.35 O
TER
ATOM 1 O3' A B 50 -18.338 56.230 8.052 1.00 38.12 O
ATOM 2 P U B 51 -19.136 57.249 7.099 1.00 39.07 P
ATOM 3 OP1 U B 51 -20.241 57.839 7.892 1.00 39.01 O
ATOM 4 OP2 U B 51 -19.444 56.571 5.820 1.00 38.81 O
ATOM 5 O5' U B 51 -18.048 58.382 6.806 1.00 39.85 O
ATOM 6 C5' U B 51 -17.665 59.292 7.836 1.00 41.47 C
ATOM 7 C4' U B 51 -16.890 60.461 7.259 1.00 42.63 C
ATOM 8 O4' U B 51 -15.634 59.964 6.732 1.00 43.00 O
ATOM 9 C3' U B 51 -17.607 61.218 6.128 1.00 43.42 C
ATOM 10 O3' U B 51 -17.959 62.615 6.403 1.00 44.39 O
ATOM 11 C2' U B 51 -16.713 61.015 4.896 1.00 43.35 C
ATOM 12 O2' U B 51 -16.531 62.193 4.134 1.00 43.67 O
ATOM 13 C1' U B 51 -15.375 60.529 5.462 1.00 43.41 C
ATOM 14 N1 U B 51 -14.677 59.522 4.566 1.00 43.65 N
ATOM 15 C2 U B 51 -13.471 59.855 3.961 1.00 43.63 C
ATOM 16 O2 U B 51 -12.908 60.926 4.109 1.00 43.97 O
ATOM 17 N3 U B 51 -12.929 58.875 3.160 1.00 43.30 N
ATOM 18 C4 U B 51 -13.457 57.622 2.900 1.00 43.16 C
ATOM 19 O4 U B 51 -12.854 56.856 2.158 1.00 43.14 O
ATOM 20 C5 U B 51 -14.710 57.341 3.557 1.00 43.19 C
ATOM 21 C6 U B 51 -15.257 58.279 4.344 1.00 43.46 C
ATOM 22 P C B 52 -17.150 63.677 7.307 1.00 45.10 P
ATOM 23 OP1 C B 52 -17.640 65.016 6.905 1.00 44.62 O
ATOM 24 OP2 C B 52 -15.693 63.389 7.260 1.00 44.89 O
ATOM 25 O5' C B 52 -17.693 63.391 8.788 1.00 44.94 O
TER
ATOM 2 P U A 39 -7.223 63.485 -3.202 1.00 55.94 P
ATOM 3 OP1 U A 39 -5.850 63.600 -3.749 1.00 56.08 O
ATOM 4 OP2 U A 39 -8.341 64.182 -3.877 1.00 55.88 O
ATOM 5 O5' U A 39 -7.613 61.935 -3.077 1.00 54.56 O
ATOM 6 C5' U A 39 -6.629 60.936 -2.779 1.00 52.38 C
ATOM 7 C4' U A 39 -7.156 59.877 -1.815 1.00 50.74 C
ATOM 8 O4' U A 39 -7.529 60.486 -0.549 1.00 50.56 O
ATOM 9 C3' U A 39 -8.384 59.085 -2.268 1.00 49.58 C
ATOM 10 O3' U A 39 -8.291 57.732 -1.808 1.00 47.54 O
ATOM 11 C2' U A 39 -9.524 59.824 -1.568 1.00 49.93 C
ATOM 12 O2' U A 39 -10.685 59.031 -1.414 1.00 49.95 O
ATOM 13 C1' U A 39 -8.856 60.107 -0.223 1.00 50.35 C
ATOM 14 N1 U A 39 -9.504 61.161 0.641 1.00 50.43 N
ATOM 15 C2 U A 39 -10.358 60.772 1.665 1.00 50.42 C
ATOM 16 O2 U A 39 -10.637 59.612 1.917 1.00 50.19 O
ATOM 17 N3 U A 39 -10.890 61.808 2.400 1.00 50.56 N
ATOM 18 C4 U A 39 -10.662 63.164 2.223 1.00 50.62 C
ATOM 19 O4 U A 39 -11.212 63.973 2.963 1.00 50.60 O
ATOM 20 C5 U A 39 -9.762 63.495 1.144 1.00 50.57 C
ATOM 21 C6 U A 39 -9.231 62.503 0.413 1.00 50.55 C
ATOM 22 P C A 40 -7.570 56.569 -2.643 1.00 45.81 P
ATOM 23 OP1 C A 40 -7.109 57.132 -3.933 1.00 45.46 O
ATOM 24 OP2 C A 40 -8.469 55.393 -2.620 1.00 45.50 O
ATOM 25 O5' C A 40 -6.273 56.232 -1.766 1.00 44.35 O
TER
ATOM 1 O3' A B 50 -18.338 56.230 8.052 1.00 38.12 O
ATOM 2 P U B 51 -19.136 57.249 7.099 1.00 39.07 P
ATOM 3 OP1 U B 51 -20.241 57.839 7.892 1.00 39.01 O
ATOM 4 OP2 U B 51 -19.444 56.571 5.820 1.00 38.81 O
ATOM 5 O5' U B 51 -18.048 58.382 6.806 1.00 39.85 O
ATOM 6 C5' U B 51 -17.665 59.292 7.836 1.00 41.47 C
ATOM 7 C4' U B 51 -16.890 60.461 7.259 1.00 42.63 C
ATOM 8 O4' U B 51 -15.634 59.964 6.732 1.00 43.00 O
ATOM 9 C3' U B 51 -17.607 61.218 6.128 1.00 43.42 C
ATOM 10 O3' U B 51 -17.959 62.615 6.403 1.00 44.39 O
ATOM 11 C2' U B 51 -16.713 61.015 4.896 1.00 43.35 C
ATOM 12 O2' U B 51 -16.531 62.193 4.134 1.00 43.67 O
ATOM 13 C1' U B 51 -15.375 60.529 5.462 1.00 43.41 C
ATOM 14 N1 U B 51 -14.677 59.522 4.566 1.00 43.65 N
ATOM 15 C2 U B 51 -13.471 59.855 3.961 1.00 43.63 C
ATOM 16 O2 U B 51 -12.908 60.926 4.109 1.00 43.97 O
ATOM 17 N3 U B 51 -12.929 58.875 3.160 1.00 43.30 N
ATOM 18 C4 U B 51 -13.457 57.622 2.900 1.00 43.16 C
ATOM 19 O4 U B 51 -12.854 56.856 2.158 1.00 43.14 O
ATOM 20 C5 U B 51 -14.710 57.341 3.557 1.00 43.19 C
ATOM 21 C6 U B 51 -15.257 58.279 4.344 1.00 43.46 C
ATOM 22 P C B 52 -17.150 63.677 7.307 1.00 45.10 P
ATOM 23 OP1 C B 52 -17.640 65.016 6.905 1.00 44.62 O
ATOM 24 OP2 C B 52 -15.693 63.389 7.260 1.00 44.89 O
ATOM 25 O5' C B 52 -17.693 63.391 8.788 1.00 44.94 O
TER
Atoms:
C4: (-10.662,63.164,2.223)
N3: (-10.890,61.808,2.400)
OP1: (-5.850,63.600,-3.749)
OP2: (-8.341,64.182,-3.877)
C2: (-10.358,60.772,1.665)
C1': (-8.856,60.107,-0.223)
C3': (-8.384,59.085,-2.268)
O5': (-7.613,61.935,-3.077)
O4': (-7.529,60.486,-0.549)
C5': (-6.629,60.936,-2.779)
P: (-7.223,63.485,-3.202)
C4': (-7.156,59.877,-1.815)
C2': (-9.524,59.824,-1.568)
O2': (-10.685,59.031,-1.414)
N1: (-9.504,61.161,0.641)
O4: (-11.212,63.973,2.963)
O2: (-10.637,59.612,1.917)
C6: (-9.231,62.503,0.413)
C5: (-9.762,63.495,1.144)
O3': (-8.291,57.732,-1.808)
N3: (-10.890,61.808,2.400)
OP1: (-5.850,63.600,-3.749)
OP2: (-8.341,64.182,-3.877)
C2: (-10.358,60.772,1.665)
C1': (-8.856,60.107,-0.223)
C3': (-8.384,59.085,-2.268)
O5': (-7.613,61.935,-3.077)
O4': (-7.529,60.486,-0.549)
C5': (-6.629,60.936,-2.779)
P: (-7.223,63.485,-3.202)
C4': (-7.156,59.877,-1.815)
C2': (-9.524,59.824,-1.568)
O2': (-10.685,59.031,-1.414)
N1: (-9.504,61.161,0.641)
O4: (-11.212,63.973,2.963)
O2: (-10.637,59.612,1.917)
C6: (-9.231,62.503,0.413)
C5: (-9.762,63.495,1.144)
O3': (-8.291,57.732,-1.808)
C4: (-13.457,57.622,2.900)
N3: (-12.929,58.875,3.160)
OP1: (-20.241,57.839,7.892)
OP2: (-19.444,56.571,5.820)
C2: (-13.471,59.855,3.961)
C1': (-15.375,60.529,5.462)
C3': (-17.607,61.218,6.128)
O5': (-18.048,58.382,6.806)
O4': (-15.634,59.964,6.732)
C5': (-17.665,59.292,7.836)
P: (-19.136,57.249,7.099)
C4': (-16.890,60.461,7.259)
C2': (-16.713,61.015,4.896)
O2': (-16.531,62.193,4.134)
N1: (-14.677,59.522,4.566)
O4: (-12.854,56.856,2.158)
O2: (-12.908,60.926,4.109)
C6: (-15.257,58.279,4.344)
C5: (-14.710,57.341,3.557)
O3': (-17.959,62.615,6.403)
N3: (-12.929,58.875,3.160)
OP1: (-20.241,57.839,7.892)
OP2: (-19.444,56.571,5.820)
C2: (-13.471,59.855,3.961)
C1': (-15.375,60.529,5.462)
C3': (-17.607,61.218,6.128)
O5': (-18.048,58.382,6.806)
O4': (-15.634,59.964,6.732)
C5': (-17.665,59.292,7.836)
P: (-19.136,57.249,7.099)
C4': (-16.890,60.461,7.259)
C2': (-16.713,61.015,4.896)
O2': (-16.531,62.193,4.134)
N1: (-14.677,59.522,4.566)
O4: (-12.854,56.856,2.158)
O2: (-12.908,60.926,4.109)
C6: (-15.257,58.279,4.344)
C5: (-14.710,57.341,3.557)
O3': (-17.959,62.615,6.403)
Image (generated by PyMOL):