Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ0:A39:A51
Extra
PDB:
ATOM 1 O3' A A 38 -6.746 64.113 -2.380 1.00 52.28 O
ATOM 2 P U A 39 -6.530 63.309 -3.747 1.00 51.23 P
ATOM 3 OP1 U A 39 -5.081 63.267 -4.059 1.00 51.62 O
ATOM 4 OP2 U A 39 -7.477 63.874 -4.733 1.00 51.38 O
ATOM 5 O5' U A 39 -7.016 61.829 -3.387 1.00 50.28 O
ATOM 6 C5' U A 39 -6.061 60.815 -3.075 1.00 48.90 C
ATOM 7 C4' U A 39 -6.574 59.887 -1.987 1.00 47.62 C
ATOM 8 O4' U A 39 -7.002 60.658 -0.833 1.00 47.33 O
ATOM 9 C3' U A 39 -7.759 59.009 -2.395 1.00 46.84 C
ATOM 10 O3' U A 39 -7.553 57.656 -1.955 1.00 45.41 O
ATOM 11 C2' U A 39 -8.938 59.677 -1.687 1.00 47.05 C
ATOM 12 O2' U A 39 -9.994 58.779 -1.404 1.00 47.05 O
ATOM 13 C1' U A 39 -8.257 60.161 -0.407 1.00 47.51 C
ATOM 14 N1 U A 39 -9.000 61.215 0.379 1.00 47.71 N
ATOM 15 C2 U A 39 -9.779 60.837 1.466 1.00 47.69 C
ATOM 16 O2 U A 39 -9.910 59.685 1.841 1.00 47.58 O
ATOM 17 N3 U A 39 -10.413 61.869 2.119 1.00 47.71 N
ATOM 18 C4 U A 39 -10.355 63.216 1.807 1.00 48.05 C
ATOM 19 O4 U A 39 -10.982 64.028 2.485 1.00 47.98 O
ATOM 20 C5 U A 39 -9.528 63.535 0.666 1.00 48.31 C
ATOM 21 C6 U A 39 -8.896 62.548 0.012 1.00 47.98 C
ATOM 22 P C A 40 -6.668 56.592 -2.771 1.00 44.13 P
ATOM 23 OP1 C A 40 -6.071 57.268 -3.947 1.00 44.13 O
ATOM 24 OP2 C A 40 -7.495 55.380 -2.965 1.00 43.76 O
ATOM 25 O5' C A 40 -5.474 56.247 -1.762 1.00 42.89 O
TER
ATOM 1 O3' A B 50 -18.048 56.331 7.702 1.00 35.12 O
ATOM 2 P U B 51 -18.618 57.464 6.725 1.00 36.27 P
ATOM 3 OP1 U B 51 -19.696 58.190 7.437 1.00 36.49 O
ATOM 4 OP2 U B 51 -18.913 56.849 5.415 1.00 36.17 O
ATOM 5 O5' U B 51 -17.347 58.422 6.545 1.00 36.99 O
ATOM 6 C5' U B 51 -16.981 59.353 7.567 1.00 37.54 C
ATOM 7 C4' U B 51 -16.291 60.573 6.982 1.00 37.74 C
ATOM 8 O4' U B 51 -15.004 60.161 6.461 1.00 38.28 O
ATOM 9 C3' U B 51 -17.046 61.276 5.841 1.00 37.94 C
ATOM 10 O3' U B 51 -17.614 62.588 6.173 1.00 37.43 O
ATOM 11 C2' U B 51 -16.100 61.237 4.628 1.00 38.40 C
ATOM 12 O2' U B 51 -15.911 62.482 3.981 1.00 38.90 O
ATOM 13 C1' U B 51 -14.770 60.726 5.184 1.00 39.00 C
ATOM 14 N1 U B 51 -14.115 59.696 4.295 1.00 39.49 N
ATOM 15 C2 U B 51 -12.863 59.945 3.743 1.00 39.60 C
ATOM 16 O2 U B 51 -12.220 60.963 3.923 1.00 39.62 O
ATOM 17 N3 U B 51 -12.369 58.938 2.949 1.00 39.68 N
ATOM 18 C4 U B 51 -12.984 57.733 2.652 1.00 39.81 C
ATOM 19 O4 U B 51 -12.416 56.930 1.921 1.00 39.87 O
ATOM 20 C5 U B 51 -14.280 57.541 3.256 1.00 39.71 C
ATOM 21 C6 U B 51 -14.783 58.508 4.036 1.00 39.57 C
ATOM 22 P C B 52 -16.881 63.850 6.853 1.00 36.68 P
ATOM 23 OP1 C B 52 -17.368 65.044 6.130 1.00 36.33 O
ATOM 24 OP2 C B 52 -15.421 63.619 6.956 1.00 36.88 O
ATOM 25 O5' C B 52 -17.510 63.864 8.327 1.00 35.71 O
TER
ATOM 2 P U A 39 -6.530 63.309 -3.747 1.00 51.23 P
ATOM 3 OP1 U A 39 -5.081 63.267 -4.059 1.00 51.62 O
ATOM 4 OP2 U A 39 -7.477 63.874 -4.733 1.00 51.38 O
ATOM 5 O5' U A 39 -7.016 61.829 -3.387 1.00 50.28 O
ATOM 6 C5' U A 39 -6.061 60.815 -3.075 1.00 48.90 C
ATOM 7 C4' U A 39 -6.574 59.887 -1.987 1.00 47.62 C
ATOM 8 O4' U A 39 -7.002 60.658 -0.833 1.00 47.33 O
ATOM 9 C3' U A 39 -7.759 59.009 -2.395 1.00 46.84 C
ATOM 10 O3' U A 39 -7.553 57.656 -1.955 1.00 45.41 O
ATOM 11 C2' U A 39 -8.938 59.677 -1.687 1.00 47.05 C
ATOM 12 O2' U A 39 -9.994 58.779 -1.404 1.00 47.05 O
ATOM 13 C1' U A 39 -8.257 60.161 -0.407 1.00 47.51 C
ATOM 14 N1 U A 39 -9.000 61.215 0.379 1.00 47.71 N
ATOM 15 C2 U A 39 -9.779 60.837 1.466 1.00 47.69 C
ATOM 16 O2 U A 39 -9.910 59.685 1.841 1.00 47.58 O
ATOM 17 N3 U A 39 -10.413 61.869 2.119 1.00 47.71 N
ATOM 18 C4 U A 39 -10.355 63.216 1.807 1.00 48.05 C
ATOM 19 O4 U A 39 -10.982 64.028 2.485 1.00 47.98 O
ATOM 20 C5 U A 39 -9.528 63.535 0.666 1.00 48.31 C
ATOM 21 C6 U A 39 -8.896 62.548 0.012 1.00 47.98 C
ATOM 22 P C A 40 -6.668 56.592 -2.771 1.00 44.13 P
ATOM 23 OP1 C A 40 -6.071 57.268 -3.947 1.00 44.13 O
ATOM 24 OP2 C A 40 -7.495 55.380 -2.965 1.00 43.76 O
ATOM 25 O5' C A 40 -5.474 56.247 -1.762 1.00 42.89 O
TER
ATOM 1 O3' A B 50 -18.048 56.331 7.702 1.00 35.12 O
ATOM 2 P U B 51 -18.618 57.464 6.725 1.00 36.27 P
ATOM 3 OP1 U B 51 -19.696 58.190 7.437 1.00 36.49 O
ATOM 4 OP2 U B 51 -18.913 56.849 5.415 1.00 36.17 O
ATOM 5 O5' U B 51 -17.347 58.422 6.545 1.00 36.99 O
ATOM 6 C5' U B 51 -16.981 59.353 7.567 1.00 37.54 C
ATOM 7 C4' U B 51 -16.291 60.573 6.982 1.00 37.74 C
ATOM 8 O4' U B 51 -15.004 60.161 6.461 1.00 38.28 O
ATOM 9 C3' U B 51 -17.046 61.276 5.841 1.00 37.94 C
ATOM 10 O3' U B 51 -17.614 62.588 6.173 1.00 37.43 O
ATOM 11 C2' U B 51 -16.100 61.237 4.628 1.00 38.40 C
ATOM 12 O2' U B 51 -15.911 62.482 3.981 1.00 38.90 O
ATOM 13 C1' U B 51 -14.770 60.726 5.184 1.00 39.00 C
ATOM 14 N1 U B 51 -14.115 59.696 4.295 1.00 39.49 N
ATOM 15 C2 U B 51 -12.863 59.945 3.743 1.00 39.60 C
ATOM 16 O2 U B 51 -12.220 60.963 3.923 1.00 39.62 O
ATOM 17 N3 U B 51 -12.369 58.938 2.949 1.00 39.68 N
ATOM 18 C4 U B 51 -12.984 57.733 2.652 1.00 39.81 C
ATOM 19 O4 U B 51 -12.416 56.930 1.921 1.00 39.87 O
ATOM 20 C5 U B 51 -14.280 57.541 3.256 1.00 39.71 C
ATOM 21 C6 U B 51 -14.783 58.508 4.036 1.00 39.57 C
ATOM 22 P C B 52 -16.881 63.850 6.853 1.00 36.68 P
ATOM 23 OP1 C B 52 -17.368 65.044 6.130 1.00 36.33 O
ATOM 24 OP2 C B 52 -15.421 63.619 6.956 1.00 36.88 O
ATOM 25 O5' C B 52 -17.510 63.864 8.327 1.00 35.71 O
TER
Atoms:
C4: (-10.355,63.216,1.807)
N3: (-10.413,61.869,2.119)
OP1: (-5.081,63.267,-4.059)
OP2: (-7.477,63.874,-4.733)
C2: (-9.779,60.837,1.466)
C1': (-8.257,60.161,-0.407)
C3': (-7.759,59.009,-2.395)
O5': (-7.016,61.829,-3.387)
O4': (-7.002,60.658,-0.833)
C5': (-6.061,60.815,-3.075)
P: (-6.530,63.309,-3.747)
C4': (-6.574,59.887,-1.987)
C2': (-8.938,59.677,-1.687)
O2': (-9.994,58.779,-1.404)
N1: (-9.000,61.215,0.379)
O4: (-10.982,64.028,2.485)
O2: (-9.910,59.685,1.841)
C6: (-8.896,62.548,0.012)
C5: (-9.528,63.535,0.666)
O3': (-7.553,57.656,-1.955)
N3: (-10.413,61.869,2.119)
OP1: (-5.081,63.267,-4.059)
OP2: (-7.477,63.874,-4.733)
C2: (-9.779,60.837,1.466)
C1': (-8.257,60.161,-0.407)
C3': (-7.759,59.009,-2.395)
O5': (-7.016,61.829,-3.387)
O4': (-7.002,60.658,-0.833)
C5': (-6.061,60.815,-3.075)
P: (-6.530,63.309,-3.747)
C4': (-6.574,59.887,-1.987)
C2': (-8.938,59.677,-1.687)
O2': (-9.994,58.779,-1.404)
N1: (-9.000,61.215,0.379)
O4: (-10.982,64.028,2.485)
O2: (-9.910,59.685,1.841)
C6: (-8.896,62.548,0.012)
C5: (-9.528,63.535,0.666)
O3': (-7.553,57.656,-1.955)
C4: (-12.984,57.733,2.652)
N3: (-12.369,58.938,2.949)
OP1: (-19.696,58.190,7.437)
OP2: (-18.913,56.849,5.415)
C2: (-12.863,59.945,3.743)
C1': (-14.770,60.726,5.184)
C3': (-17.046,61.276,5.841)
O5': (-17.347,58.422,6.545)
O4': (-15.004,60.161,6.461)
C5': (-16.981,59.353,7.567)
P: (-18.618,57.464,6.725)
C4': (-16.291,60.573,6.982)
C2': (-16.100,61.237,4.628)
O2': (-15.911,62.482,3.981)
N1: (-14.115,59.696,4.295)
O4: (-12.416,56.930,1.921)
O2: (-12.220,60.963,3.923)
C6: (-14.783,58.508,4.036)
C5: (-14.280,57.541,3.256)
O3': (-17.614,62.588,6.173)
N3: (-12.369,58.938,2.949)
OP1: (-19.696,58.190,7.437)
OP2: (-18.913,56.849,5.415)
C2: (-12.863,59.945,3.743)
C1': (-14.770,60.726,5.184)
C3': (-17.046,61.276,5.841)
O5': (-17.347,58.422,6.545)
O4': (-15.004,60.161,6.461)
C5': (-16.981,59.353,7.567)
P: (-18.618,57.464,6.725)
C4': (-16.291,60.573,6.982)
C2': (-16.100,61.237,4.628)
O2': (-15.911,62.482,3.981)
N1: (-14.115,59.696,4.295)
O4: (-12.416,56.930,1.921)
O2: (-12.220,60.963,3.923)
C6: (-14.783,58.508,4.036)
C5: (-14.280,57.541,3.256)
O3': (-17.614,62.588,6.173)
Image (generated by PyMOL):