Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ2:A39:A51
Extra
PDB:
ATOM 1 O3' A A 38 -6.844 63.321 -2.256 1.00 47.10 O
ATOM 2 P U A 39 -7.285 62.901 -3.736 1.00 46.06 P
ATOM 3 OP1 U A 39 -6.359 63.534 -4.702 1.00 46.38 O
ATOM 4 OP2 U A 39 -8.739 63.157 -3.834 1.00 46.11 O
ATOM 5 O5' U A 39 -7.060 61.317 -3.789 1.00 45.25 O
ATOM 6 C5' U A 39 -6.077 60.660 -2.986 1.00 43.85 C
ATOM 7 C4' U A 39 -6.708 59.704 -1.981 1.00 42.76 C
ATOM 8 O4' U A 39 -7.207 60.439 -0.828 1.00 42.76 O
ATOM 9 C3' U A 39 -7.884 58.851 -2.469 1.00 41.86 C
ATOM 10 O3' U A 39 -7.781 57.527 -1.924 1.00 40.31 O
ATOM 11 C2' U A 39 -9.087 59.599 -1.891 1.00 42.14 C
ATOM 12 O2' U A 39 -10.243 58.791 -1.779 1.00 42.08 O
ATOM 13 C1' U A 39 -8.507 59.962 -0.524 1.00 42.48 C
ATOM 14 N1 U A 39 -9.271 60.966 0.314 1.00 42.42 N
ATOM 15 C2 U A 39 -10.196 60.514 1.247 1.00 42.33 C
ATOM 16 O2 U A 39 -10.452 59.339 1.444 1.00 42.48 O
ATOM 17 N3 U A 39 -10.830 61.499 1.964 1.00 42.19 N
ATOM 18 C4 U A 39 -10.644 62.864 1.854 1.00 42.37 C
ATOM 19 O4 U A 39 -11.291 63.620 2.571 1.00 42.48 O
ATOM 20 C5 U A 39 -9.668 63.264 0.869 1.00 42.51 C
ATOM 21 C6 U A 39 -9.033 62.323 0.155 1.00 42.45 C
ATOM 22 P C A 40 -7.029 56.315 -2.661 1.00 38.72 P
ATOM 23 OP1 C A 40 -6.336 56.838 -3.859 1.00 38.56 O
ATOM 24 OP2 C A 40 -8.015 55.221 -2.791 1.00 38.87 O
ATOM 25 O5' C A 40 -5.909 55.855 -1.614 1.00 37.14 O
TER
ATOM 1 O3' A B 50 -18.324 56.228 7.799 1.00 26.52 O
ATOM 2 P U B 51 -19.150 57.226 6.848 1.00 27.91 P
ATOM 3 OP1 U B 51 -20.234 57.842 7.651 1.00 27.43 O
ATOM 4 OP2 U B 51 -19.496 56.519 5.595 1.00 28.00 O
ATOM 5 O5' U B 51 -18.057 58.336 6.496 1.00 28.07 O
ATOM 6 C5' U B 51 -17.649 59.264 7.494 1.00 28.61 C
ATOM 7 C4' U B 51 -16.826 60.382 6.889 1.00 28.64 C
ATOM 8 O4' U B 51 -15.568 59.821 6.447 1.00 29.11 O
ATOM 9 C3' U B 51 -17.468 61.084 5.684 1.00 28.71 C
ATOM 10 O3' U B 51 -17.963 62.438 5.950 1.00 28.36 O
ATOM 11 C2' U B 51 -16.434 60.966 4.554 1.00 28.79 C
ATOM 12 O2' U B 51 -16.122 62.187 3.913 1.00 29.51 O
ATOM 13 C1' U B 51 -15.179 60.412 5.225 1.00 29.20 C
ATOM 14 N1 U B 51 -14.477 59.401 4.358 1.00 29.34 N
ATOM 15 C2 U B 51 -13.316 59.764 3.690 1.00 29.32 C
ATOM 16 O2 U B 51 -12.804 60.868 3.765 1.00 29.70 O
ATOM 17 N3 U B 51 -12.761 58.773 2.916 1.00 29.05 N
ATOM 18 C4 U B 51 -13.241 57.487 2.742 1.00 29.11 C
ATOM 19 O4 U B 51 -12.638 56.706 2.015 1.00 29.16 O
ATOM 20 C5 U B 51 -14.453 57.184 3.463 1.00 29.15 C
ATOM 21 C6 U B 51 -15.013 58.130 4.226 1.00 29.08 C
ATOM 22 P C B 52 -17.213 63.582 6.795 1.00 27.83 P
ATOM 23 OP1 C B 52 -17.641 64.880 6.238 1.00 27.71 O
ATOM 24 OP2 C B 52 -15.764 63.280 6.889 1.00 28.13 O
ATOM 25 O5' C B 52 -17.858 63.448 8.251 1.00 27.40 O
TER
ATOM 2 P U A 39 -7.285 62.901 -3.736 1.00 46.06 P
ATOM 3 OP1 U A 39 -6.359 63.534 -4.702 1.00 46.38 O
ATOM 4 OP2 U A 39 -8.739 63.157 -3.834 1.00 46.11 O
ATOM 5 O5' U A 39 -7.060 61.317 -3.789 1.00 45.25 O
ATOM 6 C5' U A 39 -6.077 60.660 -2.986 1.00 43.85 C
ATOM 7 C4' U A 39 -6.708 59.704 -1.981 1.00 42.76 C
ATOM 8 O4' U A 39 -7.207 60.439 -0.828 1.00 42.76 O
ATOM 9 C3' U A 39 -7.884 58.851 -2.469 1.00 41.86 C
ATOM 10 O3' U A 39 -7.781 57.527 -1.924 1.00 40.31 O
ATOM 11 C2' U A 39 -9.087 59.599 -1.891 1.00 42.14 C
ATOM 12 O2' U A 39 -10.243 58.791 -1.779 1.00 42.08 O
ATOM 13 C1' U A 39 -8.507 59.962 -0.524 1.00 42.48 C
ATOM 14 N1 U A 39 -9.271 60.966 0.314 1.00 42.42 N
ATOM 15 C2 U A 39 -10.196 60.514 1.247 1.00 42.33 C
ATOM 16 O2 U A 39 -10.452 59.339 1.444 1.00 42.48 O
ATOM 17 N3 U A 39 -10.830 61.499 1.964 1.00 42.19 N
ATOM 18 C4 U A 39 -10.644 62.864 1.854 1.00 42.37 C
ATOM 19 O4 U A 39 -11.291 63.620 2.571 1.00 42.48 O
ATOM 20 C5 U A 39 -9.668 63.264 0.869 1.00 42.51 C
ATOM 21 C6 U A 39 -9.033 62.323 0.155 1.00 42.45 C
ATOM 22 P C A 40 -7.029 56.315 -2.661 1.00 38.72 P
ATOM 23 OP1 C A 40 -6.336 56.838 -3.859 1.00 38.56 O
ATOM 24 OP2 C A 40 -8.015 55.221 -2.791 1.00 38.87 O
ATOM 25 O5' C A 40 -5.909 55.855 -1.614 1.00 37.14 O
TER
ATOM 1 O3' A B 50 -18.324 56.228 7.799 1.00 26.52 O
ATOM 2 P U B 51 -19.150 57.226 6.848 1.00 27.91 P
ATOM 3 OP1 U B 51 -20.234 57.842 7.651 1.00 27.43 O
ATOM 4 OP2 U B 51 -19.496 56.519 5.595 1.00 28.00 O
ATOM 5 O5' U B 51 -18.057 58.336 6.496 1.00 28.07 O
ATOM 6 C5' U B 51 -17.649 59.264 7.494 1.00 28.61 C
ATOM 7 C4' U B 51 -16.826 60.382 6.889 1.00 28.64 C
ATOM 8 O4' U B 51 -15.568 59.821 6.447 1.00 29.11 O
ATOM 9 C3' U B 51 -17.468 61.084 5.684 1.00 28.71 C
ATOM 10 O3' U B 51 -17.963 62.438 5.950 1.00 28.36 O
ATOM 11 C2' U B 51 -16.434 60.966 4.554 1.00 28.79 C
ATOM 12 O2' U B 51 -16.122 62.187 3.913 1.00 29.51 O
ATOM 13 C1' U B 51 -15.179 60.412 5.225 1.00 29.20 C
ATOM 14 N1 U B 51 -14.477 59.401 4.358 1.00 29.34 N
ATOM 15 C2 U B 51 -13.316 59.764 3.690 1.00 29.32 C
ATOM 16 O2 U B 51 -12.804 60.868 3.765 1.00 29.70 O
ATOM 17 N3 U B 51 -12.761 58.773 2.916 1.00 29.05 N
ATOM 18 C4 U B 51 -13.241 57.487 2.742 1.00 29.11 C
ATOM 19 O4 U B 51 -12.638 56.706 2.015 1.00 29.16 O
ATOM 20 C5 U B 51 -14.453 57.184 3.463 1.00 29.15 C
ATOM 21 C6 U B 51 -15.013 58.130 4.226 1.00 29.08 C
ATOM 22 P C B 52 -17.213 63.582 6.795 1.00 27.83 P
ATOM 23 OP1 C B 52 -17.641 64.880 6.238 1.00 27.71 O
ATOM 24 OP2 C B 52 -15.764 63.280 6.889 1.00 28.13 O
ATOM 25 O5' C B 52 -17.858 63.448 8.251 1.00 27.40 O
TER
Atoms:
C4: (-10.644,62.864,1.854)
N3: (-10.830,61.499,1.964)
OP1: (-6.359,63.534,-4.702)
OP2: (-8.739,63.157,-3.834)
C2: (-10.196,60.514,1.247)
C1': (-8.507,59.962,-0.524)
C3': (-7.884,58.851,-2.469)
O5': (-7.060,61.317,-3.789)
O4': (-7.207,60.439,-0.828)
C5': (-6.077,60.660,-2.986)
P: (-7.285,62.901,-3.736)
C4': (-6.708,59.704,-1.981)
C2': (-9.087,59.599,-1.891)
O2': (-10.243,58.791,-1.779)
N1: (-9.271,60.966,0.314)
O4: (-11.291,63.620,2.571)
O2: (-10.452,59.339,1.444)
C6: (-9.033,62.323,0.155)
C5: (-9.668,63.264,0.869)
O3': (-7.781,57.527,-1.924)
N3: (-10.830,61.499,1.964)
OP1: (-6.359,63.534,-4.702)
OP2: (-8.739,63.157,-3.834)
C2: (-10.196,60.514,1.247)
C1': (-8.507,59.962,-0.524)
C3': (-7.884,58.851,-2.469)
O5': (-7.060,61.317,-3.789)
O4': (-7.207,60.439,-0.828)
C5': (-6.077,60.660,-2.986)
P: (-7.285,62.901,-3.736)
C4': (-6.708,59.704,-1.981)
C2': (-9.087,59.599,-1.891)
O2': (-10.243,58.791,-1.779)
N1: (-9.271,60.966,0.314)
O4: (-11.291,63.620,2.571)
O2: (-10.452,59.339,1.444)
C6: (-9.033,62.323,0.155)
C5: (-9.668,63.264,0.869)
O3': (-7.781,57.527,-1.924)
C4: (-13.241,57.487,2.742)
N3: (-12.761,58.773,2.916)
OP1: (-20.234,57.842,7.651)
OP2: (-19.496,56.519,5.595)
C2: (-13.316,59.764,3.690)
C1': (-15.179,60.412,5.225)
C3': (-17.468,61.084,5.684)
O5': (-18.057,58.336,6.496)
O4': (-15.568,59.821,6.447)
C5': (-17.649,59.264,7.494)
P: (-19.150,57.226,6.848)
C4': (-16.826,60.382,6.889)
C2': (-16.434,60.966,4.554)
O2': (-16.122,62.187,3.913)
N1: (-14.477,59.401,4.358)
O4: (-12.638,56.706,2.015)
O2: (-12.804,60.868,3.765)
C6: (-15.013,58.130,4.226)
C5: (-14.453,57.184,3.463)
O3': (-17.963,62.438,5.950)
N3: (-12.761,58.773,2.916)
OP1: (-20.234,57.842,7.651)
OP2: (-19.496,56.519,5.595)
C2: (-13.316,59.764,3.690)
C1': (-15.179,60.412,5.225)
C3': (-17.468,61.084,5.684)
O5': (-18.057,58.336,6.496)
O4': (-15.568,59.821,6.447)
C5': (-17.649,59.264,7.494)
P: (-19.150,57.226,6.848)
C4': (-16.826,60.382,6.889)
C2': (-16.434,60.966,4.554)
O2': (-16.122,62.187,3.913)
N1: (-14.477,59.401,4.358)
O4: (-12.638,56.706,2.015)
O2: (-12.804,60.868,3.765)
C6: (-15.013,58.130,4.226)
C5: (-14.453,57.184,3.463)
O3': (-17.963,62.438,5.950)
Image (generated by PyMOL):