Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1243:A1281
Extra
PDB:
ATOM 1 O3' A A1242 28.858 -78.745 3.234 1.00 54.08 O
ATOM 2 P U A1243 28.130 -78.701 1.801 1.00 56.09 P
ATOM 3 OP1 U A1243 26.849 -78.002 2.057 1.00 53.61 O
ATOM 4 OP2 U A1243 28.089 -80.050 1.245 1.00 48.53 O
ATOM 5 O5' U A1243 29.009 -77.736 0.887 1.00 49.91 O
ATOM 6 C5' U A1243 28.762 -76.324 0.912 1.00 47.45 C
ATOM 7 C4' U A1243 29.434 -75.654 -0.259 1.00 49.21 C
ATOM 8 O4' U A1243 30.849 -75.908 -0.098 1.00 50.16 O
ATOM 9 C3' U A1243 29.021 -76.157 -1.640 1.00 45.20 C
ATOM 10 O3' U A1243 28.939 -75.104 -2.639 1.00 45.81 O
ATOM 11 C2' U A1243 30.123 -77.194 -1.933 1.00 41.27 C
ATOM 12 O2' U A1243 30.390 -77.373 -3.300 1.00 44.88 O
ATOM 13 C1' U A1243 31.335 -76.602 -1.211 1.00 48.14 C
ATOM 14 N1 U A1243 32.293 -77.599 -0.717 1.00 53.43 N
ATOM 15 C2 U A1243 33.604 -77.523 -1.157 1.00 49.74 C
ATOM 16 O2 U A1243 34.002 -76.645 -1.898 1.00 55.40 O
ATOM 17 N3 U A1243 34.432 -78.516 -0.709 1.00 38.28 N
ATOM 18 C4 U A1243 34.095 -79.555 0.098 1.00 42.05 C
ATOM 19 O4 U A1243 34.863 -80.506 0.182 1.00 53.36 O
ATOM 20 C5 U A1243 32.742 -79.539 0.556 1.00 48.30 C
ATOM 21 C6 U A1243 31.912 -78.586 0.143 1.00 51.17 C
ATOM 22 P C A1244 27.800 -73.926 -2.516 1.00 45.46 P
ATOM 23 OP1 C A1244 28.376 -72.620 -2.906 1.00 42.93 O
ATOM 24 OP2 C A1244 27.072 -74.061 -1.216 1.00 43.94 O
ATOM 25 O5' C A1244 26.751 -74.226 -3.677 1.00 47.28 O
TER
ATOM 1 O3' G B1280 41.385 -75.271 -8.333 1.00 34.89 O
ATOM 2 P U B1281 40.569 -76.611 -7.942 1.00 41.47 P
ATOM 3 OP1 U B1281 41.225 -77.748 -8.622 1.00 36.45 O
ATOM 4 OP2 U B1281 39.109 -76.404 -8.136 1.00 44.73 O
ATOM 5 O5' U B1281 40.810 -76.753 -6.371 1.00 41.45 O
ATOM 6 C5' U B1281 41.843 -77.591 -5.859 1.00 45.07 C
ATOM 7 C4' U B1281 41.272 -78.557 -4.861 1.00 46.97 C
ATOM 8 O4' U B1281 40.867 -77.872 -3.649 1.00 46.18 O
ATOM 9 C3' U B1281 40.008 -79.232 -5.361 1.00 42.57 C
ATOM 10 O3' U B1281 40.388 -80.330 -6.171 1.00 38.39 O
ATOM 11 C2' U B1281 39.280 -79.590 -4.071 1.00 45.17 C
ATOM 12 O2' U B1281 39.797 -80.739 -3.453 1.00 39.58 O
ATOM 13 C1' U B1281 39.648 -78.417 -3.167 1.00 43.75 C
ATOM 14 N1 U B1281 38.653 -77.345 -3.213 1.00 42.79 N
ATOM 15 C2 U B1281 37.475 -77.468 -2.485 1.00 46.33 C
ATOM 16 O2 U B1281 37.181 -78.469 -1.844 1.00 50.91 O
ATOM 17 N3 U B1281 36.647 -76.368 -2.550 1.00 46.62 N
ATOM 18 C4 U B1281 36.866 -75.205 -3.269 1.00 50.25 C
ATOM 19 O4 U B1281 36.043 -74.285 -3.225 1.00 46.66 O
ATOM 20 C5 U B1281 38.088 -75.194 -4.016 1.00 53.26 C
ATOM 21 C6 U B1281 38.912 -76.241 -3.963 1.00 42.57 C
ATOM 22 P C B1282 39.274 -81.068 -7.034 1.00 53.13 P
ATOM 23 OP1 C B1282 39.909 -82.070 -7.930 1.00 42.91 O
ATOM 24 OP2 C B1282 38.392 -80.003 -7.625 1.00 47.36 O
ATOM 25 O5' C B1282 38.468 -81.837 -5.902 1.00 44.47 O
TER
ATOM 2 P U A1243 28.130 -78.701 1.801 1.00 56.09 P
ATOM 3 OP1 U A1243 26.849 -78.002 2.057 1.00 53.61 O
ATOM 4 OP2 U A1243 28.089 -80.050 1.245 1.00 48.53 O
ATOM 5 O5' U A1243 29.009 -77.736 0.887 1.00 49.91 O
ATOM 6 C5' U A1243 28.762 -76.324 0.912 1.00 47.45 C
ATOM 7 C4' U A1243 29.434 -75.654 -0.259 1.00 49.21 C
ATOM 8 O4' U A1243 30.849 -75.908 -0.098 1.00 50.16 O
ATOM 9 C3' U A1243 29.021 -76.157 -1.640 1.00 45.20 C
ATOM 10 O3' U A1243 28.939 -75.104 -2.639 1.00 45.81 O
ATOM 11 C2' U A1243 30.123 -77.194 -1.933 1.00 41.27 C
ATOM 12 O2' U A1243 30.390 -77.373 -3.300 1.00 44.88 O
ATOM 13 C1' U A1243 31.335 -76.602 -1.211 1.00 48.14 C
ATOM 14 N1 U A1243 32.293 -77.599 -0.717 1.00 53.43 N
ATOM 15 C2 U A1243 33.604 -77.523 -1.157 1.00 49.74 C
ATOM 16 O2 U A1243 34.002 -76.645 -1.898 1.00 55.40 O
ATOM 17 N3 U A1243 34.432 -78.516 -0.709 1.00 38.28 N
ATOM 18 C4 U A1243 34.095 -79.555 0.098 1.00 42.05 C
ATOM 19 O4 U A1243 34.863 -80.506 0.182 1.00 53.36 O
ATOM 20 C5 U A1243 32.742 -79.539 0.556 1.00 48.30 C
ATOM 21 C6 U A1243 31.912 -78.586 0.143 1.00 51.17 C
ATOM 22 P C A1244 27.800 -73.926 -2.516 1.00 45.46 P
ATOM 23 OP1 C A1244 28.376 -72.620 -2.906 1.00 42.93 O
ATOM 24 OP2 C A1244 27.072 -74.061 -1.216 1.00 43.94 O
ATOM 25 O5' C A1244 26.751 -74.226 -3.677 1.00 47.28 O
TER
ATOM 1 O3' G B1280 41.385 -75.271 -8.333 1.00 34.89 O
ATOM 2 P U B1281 40.569 -76.611 -7.942 1.00 41.47 P
ATOM 3 OP1 U B1281 41.225 -77.748 -8.622 1.00 36.45 O
ATOM 4 OP2 U B1281 39.109 -76.404 -8.136 1.00 44.73 O
ATOM 5 O5' U B1281 40.810 -76.753 -6.371 1.00 41.45 O
ATOM 6 C5' U B1281 41.843 -77.591 -5.859 1.00 45.07 C
ATOM 7 C4' U B1281 41.272 -78.557 -4.861 1.00 46.97 C
ATOM 8 O4' U B1281 40.867 -77.872 -3.649 1.00 46.18 O
ATOM 9 C3' U B1281 40.008 -79.232 -5.361 1.00 42.57 C
ATOM 10 O3' U B1281 40.388 -80.330 -6.171 1.00 38.39 O
ATOM 11 C2' U B1281 39.280 -79.590 -4.071 1.00 45.17 C
ATOM 12 O2' U B1281 39.797 -80.739 -3.453 1.00 39.58 O
ATOM 13 C1' U B1281 39.648 -78.417 -3.167 1.00 43.75 C
ATOM 14 N1 U B1281 38.653 -77.345 -3.213 1.00 42.79 N
ATOM 15 C2 U B1281 37.475 -77.468 -2.485 1.00 46.33 C
ATOM 16 O2 U B1281 37.181 -78.469 -1.844 1.00 50.91 O
ATOM 17 N3 U B1281 36.647 -76.368 -2.550 1.00 46.62 N
ATOM 18 C4 U B1281 36.866 -75.205 -3.269 1.00 50.25 C
ATOM 19 O4 U B1281 36.043 -74.285 -3.225 1.00 46.66 O
ATOM 20 C5 U B1281 38.088 -75.194 -4.016 1.00 53.26 C
ATOM 21 C6 U B1281 38.912 -76.241 -3.963 1.00 42.57 C
ATOM 22 P C B1282 39.274 -81.068 -7.034 1.00 53.13 P
ATOM 23 OP1 C B1282 39.909 -82.070 -7.930 1.00 42.91 O
ATOM 24 OP2 C B1282 38.392 -80.003 -7.625 1.00 47.36 O
ATOM 25 O5' C B1282 38.468 -81.837 -5.902 1.00 44.47 O
TER
Atoms:
C4: (34.095,-79.555,0.098)
N3: (34.432,-78.516,-0.709)
OP1: (26.849,-78.002,2.057)
OP2: (28.089,-80.050,1.245)
C2: (33.604,-77.523,-1.157)
C1': (31.335,-76.602,-1.211)
C3': (29.021,-76.157,-1.640)
O5': (29.009,-77.736,0.887)
O4': (30.849,-75.908,-0.098)
C5': (28.762,-76.324,0.912)
P: (28.130,-78.701,1.801)
C4': (29.434,-75.654,-0.259)
C2': (30.123,-77.194,-1.933)
O2': (30.390,-77.373,-3.300)
N1: (32.293,-77.599,-0.717)
O4: (34.863,-80.506,0.182)
O2: (34.002,-76.645,-1.898)
C6: (31.912,-78.586,0.143)
C5: (32.742,-79.539,0.556)
O3': (28.939,-75.104,-2.639)
N3: (34.432,-78.516,-0.709)
OP1: (26.849,-78.002,2.057)
OP2: (28.089,-80.050,1.245)
C2: (33.604,-77.523,-1.157)
C1': (31.335,-76.602,-1.211)
C3': (29.021,-76.157,-1.640)
O5': (29.009,-77.736,0.887)
O4': (30.849,-75.908,-0.098)
C5': (28.762,-76.324,0.912)
P: (28.130,-78.701,1.801)
C4': (29.434,-75.654,-0.259)
C2': (30.123,-77.194,-1.933)
O2': (30.390,-77.373,-3.300)
N1: (32.293,-77.599,-0.717)
O4: (34.863,-80.506,0.182)
O2: (34.002,-76.645,-1.898)
C6: (31.912,-78.586,0.143)
C5: (32.742,-79.539,0.556)
O3': (28.939,-75.104,-2.639)
C4: (36.866,-75.205,-3.269)
N3: (36.647,-76.368,-2.550)
OP1: (41.225,-77.748,-8.622)
OP2: (39.109,-76.404,-8.136)
C2: (37.475,-77.468,-2.485)
C1': (39.648,-78.417,-3.167)
C3': (40.008,-79.232,-5.361)
O5': (40.810,-76.753,-6.371)
O4': (40.867,-77.872,-3.649)
C5': (41.843,-77.591,-5.859)
P: (40.569,-76.611,-7.942)
C4': (41.272,-78.557,-4.861)
C2': (39.280,-79.590,-4.071)
O2': (39.797,-80.739,-3.453)
N1: (38.653,-77.345,-3.213)
O4: (36.043,-74.285,-3.225)
O2: (37.181,-78.469,-1.844)
C6: (38.912,-76.241,-3.963)
C5: (38.088,-75.194,-4.016)
O3': (40.388,-80.330,-6.171)
N3: (36.647,-76.368,-2.550)
OP1: (41.225,-77.748,-8.622)
OP2: (39.109,-76.404,-8.136)
C2: (37.475,-77.468,-2.485)
C1': (39.648,-78.417,-3.167)
C3': (40.008,-79.232,-5.361)
O5': (40.810,-76.753,-6.371)
O4': (40.867,-77.872,-3.649)
C5': (41.843,-77.591,-5.859)
P: (40.569,-76.611,-7.942)
C4': (41.272,-78.557,-4.861)
C2': (39.280,-79.590,-4.071)
O2': (39.797,-80.739,-3.453)
N1: (38.653,-77.345,-3.213)
O4: (36.043,-74.285,-3.225)
O2: (37.181,-78.469,-1.844)
C6: (38.912,-76.241,-3.963)
C5: (38.088,-75.194,-4.016)
O3': (40.388,-80.330,-6.171)
Image (generated by PyMOL):