Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11947:12707
Extra
PDB:
ATOM 1 O3' A A1946 23.795 14.193 86.660 1.00 39.80 O
ATOM 2 P U A1947 22.501 13.693 85.866 1.00 39.03 P
ATOM 3 OP1 U A1947 21.370 14.363 86.447 1.00 39.31 O
ATOM 4 OP2 U A1947 22.545 12.229 85.869 1.00 38.81 O
ATOM 5 O5' U A1947 22.726 14.258 84.401 1.00 38.93 O
ATOM 6 C5' U A1947 22.294 15.561 84.071 1.00 39.14 C
ATOM 7 C4' U A1947 21.484 15.557 82.820 1.00 39.08 C
ATOM 8 O4' U A1947 22.131 14.712 81.842 1.00 38.79 O
ATOM 9 C3' U A1947 20.105 14.976 82.960 1.00 39.13 C
ATOM 10 O3' U A1947 19.151 15.896 83.461 1.00 39.43 O
ATOM 11 C2' U A1947 19.792 14.473 81.561 1.00 38.95 C
ATOM 12 O2' U A1947 19.261 15.513 80.766 1.00 39.10 O
ATOM 13 C1' U A1947 21.181 14.085 81.039 1.00 38.70 C
ATOM 14 N1 U A1947 21.378 12.641 81.125 1.00 38.47 N
ATOM 15 C2 U A1947 20.767 11.967 80.092 1.00 38.34 C
ATOM 16 O2 U A1947 20.220 12.600 79.203 1.00 38.42 O
ATOM 17 N3 U A1947 20.851 10.580 80.121 1.00 38.14 N
ATOM 18 C4 U A1947 21.493 9.837 81.093 1.00 38.07 C
ATOM 19 O4 U A1947 21.488 8.596 80.977 1.00 37.91 O
ATOM 20 C5 U A1947 22.096 10.613 82.149 1.00 38.22 C
ATOM 21 C6 U A1947 22.006 11.952 82.148 1.00 38.41 C
ATOM 22 P U A1948 17.960 15.372 84.426 1.00 38.98 P
ATOM 23 OP1 U A1948 17.121 16.467 84.698 1.00 39.29 O
ATOM 24 OP2 U A1948 18.586 14.692 85.511 1.00 38.93 O
ATOM 25 O5' U A1948 17.156 14.324 83.537 1.00 38.80 O
TER
ATOM 1 O3' U B2706 17.149 5.332 72.334 1.00 80.62 O
ATOM 2 P U B2707 16.690 5.134 73.851 1.00 49.17 P
ATOM 3 OP1 U B2707 15.538 4.172 73.890 1.00 49.22 O
ATOM 4 OP2 U B2707 16.475 6.496 74.408 1.00 49.36 O
ATOM 5 O5' U B2707 17.972 4.466 74.501 1.00 48.99 O
ATOM 6 C5' U B2707 18.208 3.067 74.389 1.00 48.83 C
ATOM 7 C4' U B2707 19.019 2.577 75.543 1.00 48.76 C
ATOM 8 O4' U B2707 20.261 3.328 75.595 1.00 48.70 O
ATOM 9 C3' U B2707 18.411 2.823 76.902 1.00 48.91 C
ATOM 10 O3' U B2707 17.453 1.869 77.270 1.00 48.96 O
ATOM 11 C2' U B2707 19.622 2.819 77.792 1.00 48.84 C
ATOM 12 O2' U B2707 20.111 1.489 77.933 1.00 48.70 O
ATOM 13 C1' U B2707 20.591 3.615 76.927 1.00 48.76 C
ATOM 14 N1 U B2707 20.444 5.077 77.141 1.00 48.93 N
ATOM 15 C2 U B2707 20.848 5.573 78.364 1.00 49.02 C
ATOM 16 O2 U B2707 21.298 4.838 79.232 1.00 48.97 O
ATOM 17 N3 U B2707 20.695 6.931 78.561 1.00 49.19 N
ATOM 18 C4 U B2707 20.148 7.823 77.656 1.00 49.28 C
ATOM 19 O4 U B2707 20.045 9.020 77.981 1.00 49.46 O
ATOM 20 C5 U B2707 19.749 7.234 76.405 1.00 49.18 C
ATOM 21 C6 U B2707 19.909 5.924 76.201 1.00 49.01 C
ATOM 22 P A B2708 16.373 2.249 78.400 1.00 39.17 P
ATOM 23 OP1 A B2708 15.615 1.009 78.747 1.00 39.18 O
ATOM 24 OP2 A B2708 15.644 3.344 77.904 1.00 39.31 O
ATOM 25 O5' A B2708 17.279 2.722 79.625 1.00 39.19 O
TER
ATOM 2 P U A1947 22.501 13.693 85.866 1.00 39.03 P
ATOM 3 OP1 U A1947 21.370 14.363 86.447 1.00 39.31 O
ATOM 4 OP2 U A1947 22.545 12.229 85.869 1.00 38.81 O
ATOM 5 O5' U A1947 22.726 14.258 84.401 1.00 38.93 O
ATOM 6 C5' U A1947 22.294 15.561 84.071 1.00 39.14 C
ATOM 7 C4' U A1947 21.484 15.557 82.820 1.00 39.08 C
ATOM 8 O4' U A1947 22.131 14.712 81.842 1.00 38.79 O
ATOM 9 C3' U A1947 20.105 14.976 82.960 1.00 39.13 C
ATOM 10 O3' U A1947 19.151 15.896 83.461 1.00 39.43 O
ATOM 11 C2' U A1947 19.792 14.473 81.561 1.00 38.95 C
ATOM 12 O2' U A1947 19.261 15.513 80.766 1.00 39.10 O
ATOM 13 C1' U A1947 21.181 14.085 81.039 1.00 38.70 C
ATOM 14 N1 U A1947 21.378 12.641 81.125 1.00 38.47 N
ATOM 15 C2 U A1947 20.767 11.967 80.092 1.00 38.34 C
ATOM 16 O2 U A1947 20.220 12.600 79.203 1.00 38.42 O
ATOM 17 N3 U A1947 20.851 10.580 80.121 1.00 38.14 N
ATOM 18 C4 U A1947 21.493 9.837 81.093 1.00 38.07 C
ATOM 19 O4 U A1947 21.488 8.596 80.977 1.00 37.91 O
ATOM 20 C5 U A1947 22.096 10.613 82.149 1.00 38.22 C
ATOM 21 C6 U A1947 22.006 11.952 82.148 1.00 38.41 C
ATOM 22 P U A1948 17.960 15.372 84.426 1.00 38.98 P
ATOM 23 OP1 U A1948 17.121 16.467 84.698 1.00 39.29 O
ATOM 24 OP2 U A1948 18.586 14.692 85.511 1.00 38.93 O
ATOM 25 O5' U A1948 17.156 14.324 83.537 1.00 38.80 O
TER
ATOM 1 O3' U B2706 17.149 5.332 72.334 1.00 80.62 O
ATOM 2 P U B2707 16.690 5.134 73.851 1.00 49.17 P
ATOM 3 OP1 U B2707 15.538 4.172 73.890 1.00 49.22 O
ATOM 4 OP2 U B2707 16.475 6.496 74.408 1.00 49.36 O
ATOM 5 O5' U B2707 17.972 4.466 74.501 1.00 48.99 O
ATOM 6 C5' U B2707 18.208 3.067 74.389 1.00 48.83 C
ATOM 7 C4' U B2707 19.019 2.577 75.543 1.00 48.76 C
ATOM 8 O4' U B2707 20.261 3.328 75.595 1.00 48.70 O
ATOM 9 C3' U B2707 18.411 2.823 76.902 1.00 48.91 C
ATOM 10 O3' U B2707 17.453 1.869 77.270 1.00 48.96 O
ATOM 11 C2' U B2707 19.622 2.819 77.792 1.00 48.84 C
ATOM 12 O2' U B2707 20.111 1.489 77.933 1.00 48.70 O
ATOM 13 C1' U B2707 20.591 3.615 76.927 1.00 48.76 C
ATOM 14 N1 U B2707 20.444 5.077 77.141 1.00 48.93 N
ATOM 15 C2 U B2707 20.848 5.573 78.364 1.00 49.02 C
ATOM 16 O2 U B2707 21.298 4.838 79.232 1.00 48.97 O
ATOM 17 N3 U B2707 20.695 6.931 78.561 1.00 49.19 N
ATOM 18 C4 U B2707 20.148 7.823 77.656 1.00 49.28 C
ATOM 19 O4 U B2707 20.045 9.020 77.981 1.00 49.46 O
ATOM 20 C5 U B2707 19.749 7.234 76.405 1.00 49.18 C
ATOM 21 C6 U B2707 19.909 5.924 76.201 1.00 49.01 C
ATOM 22 P A B2708 16.373 2.249 78.400 1.00 39.17 P
ATOM 23 OP1 A B2708 15.615 1.009 78.747 1.00 39.18 O
ATOM 24 OP2 A B2708 15.644 3.344 77.904 1.00 39.31 O
ATOM 25 O5' A B2708 17.279 2.722 79.625 1.00 39.19 O
TER
Atoms:
C4: (21.493,9.837,81.093)
N3: (20.851,10.580,80.121)
OP1: (21.370,14.363,86.447)
OP2: (22.545,12.229,85.869)
C2: (20.767,11.967,80.092)
C1': (21.181,14.085,81.039)
C3': (20.105,14.976,82.960)
O5': (22.726,14.258,84.401)
O4': (22.131,14.712,81.842)
C5': (22.294,15.561,84.071)
P: (22.501,13.693,85.866)
C4': (21.484,15.557,82.820)
C2': (19.792,14.473,81.561)
O2': (19.261,15.513,80.766)
N1: (21.378,12.641,81.125)
O4: (21.488,8.596,80.977)
O2: (20.220,12.600,79.203)
C6: (22.006,11.952,82.148)
C5: (22.096,10.613,82.149)
O3': (19.151,15.896,83.461)
N3: (20.851,10.580,80.121)
OP1: (21.370,14.363,86.447)
OP2: (22.545,12.229,85.869)
C2: (20.767,11.967,80.092)
C1': (21.181,14.085,81.039)
C3': (20.105,14.976,82.960)
O5': (22.726,14.258,84.401)
O4': (22.131,14.712,81.842)
C5': (22.294,15.561,84.071)
P: (22.501,13.693,85.866)
C4': (21.484,15.557,82.820)
C2': (19.792,14.473,81.561)
O2': (19.261,15.513,80.766)
N1: (21.378,12.641,81.125)
O4: (21.488,8.596,80.977)
O2: (20.220,12.600,79.203)
C6: (22.006,11.952,82.148)
C5: (22.096,10.613,82.149)
O3': (19.151,15.896,83.461)
C4: (20.148,7.823,77.656)
N3: (20.695,6.931,78.561)
OP1: (15.538,4.172,73.890)
OP2: (16.475,6.496,74.408)
C2: (20.848,5.573,78.364)
C1': (20.591,3.615,76.927)
C3': (18.411,2.823,76.902)
O5': (17.972,4.466,74.501)
O4': (20.261,3.328,75.595)
C5': (18.208,3.067,74.389)
P: (16.690,5.134,73.851)
C4': (19.019,2.577,75.543)
C2': (19.622,2.819,77.792)
O2': (20.111,1.489,77.933)
N1: (20.444,5.077,77.141)
O4: (20.045,9.020,77.981)
O2: (21.298,4.838,79.232)
C6: (19.909,5.924,76.201)
C5: (19.749,7.234,76.405)
O3': (17.453,1.869,77.270)
N3: (20.695,6.931,78.561)
OP1: (15.538,4.172,73.890)
OP2: (16.475,6.496,74.408)
C2: (20.848,5.573,78.364)
C1': (20.591,3.615,76.927)
C3': (18.411,2.823,76.902)
O5': (17.972,4.466,74.501)
O4': (20.261,3.328,75.595)
C5': (18.208,3.067,74.389)
P: (16.690,5.134,73.851)
C4': (19.019,2.577,75.543)
C2': (19.622,2.819,77.792)
O2': (20.111,1.489,77.933)
N1: (20.444,5.077,77.141)
O4: (20.045,9.020,77.981)
O2: (21.298,4.838,79.232)
C6: (19.909,5.924,76.201)
C5: (19.749,7.234,76.405)
O3': (17.453,1.869,77.270)
Image (generated by PyMOL):