Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2681:A2678
Extra
PDB:
ATOM 1 O3' A A2680 42.010 162.704 108.214 1.00 38.52 O
ATOM 2 P G A2681 41.358 163.560 109.391 1.00 41.09 P
ATOM 3 OP1 G A2681 40.572 164.641 108.765 1.00 43.66 O
ATOM 4 OP2 G A2681 42.465 163.909 110.314 1.00 38.13 O
ATOM 5 O5' G A2681 40.331 162.563 110.104 1.00 39.65 O
ATOM 6 C5' G A2681 39.168 162.078 109.414 1.00 38.99 C
ATOM 7 C4' G A2681 38.656 160.787 110.029 1.00 40.06 C
ATOM 8 O4' G A2681 39.724 159.814 110.180 1.00 39.62 O
ATOM 9 C3' G A2681 38.177 160.840 111.462 1.00 40.15 C
ATOM 10 O3' G A2681 36.919 161.453 111.606 1.00 41.31 O
ATOM 11 C2' G A2681 38.068 159.358 111.792 1.00 39.23 C
ATOM 12 O2' G A2681 36.914 158.740 111.283 1.00 40.49 O
ATOM 13 C1' G A2681 39.278 158.793 111.058 1.00 39.65 C
ATOM 14 N9 G A2681 40.282 158.514 112.071 1.00 40.84 N
ATOM 15 C8 G A2681 40.421 157.334 112.756 1.00 40.62 C
ATOM 16 N7 G A2681 41.326 157.388 113.685 1.00 40.62 N
ATOM 17 C5 G A2681 41.835 158.672 113.597 1.00 41.55 C
ATOM 18 C6 G A2681 42.834 159.300 114.357 1.00 43.18 C
ATOM 19 O6 G A2681 43.503 158.830 115.277 1.00 46.58 O
ATOM 20 N1 G A2681 43.034 160.610 113.957 1.00 43.68 N
ATOM 21 C2 G A2681 42.358 161.236 112.944 1.00 43.75 C
ATOM 22 N2 G A2681 42.674 162.531 112.736 1.00 44.16 N
ATOM 23 N3 G A2681 41.435 160.649 112.203 1.00 42.23 N
ATOM 24 C4 G A2681 41.218 159.377 112.590 1.00 41.25 C
ATOM 25 P A A2682 36.565 162.194 112.975 1.00 42.83 P
ATOM 26 OP1 A A2682 35.092 162.320 113.032 1.00 43.27 O
ATOM 27 OP2 A A2682 37.427 163.403 113.045 1.00 43.35 O
ATOM 28 O5' A A2682 37.021 161.181 114.103 1.00 40.11 O
TER
ATOM 1 O3' A B2677 46.631 161.128 122.265 1.00 40.93 O
ATOM 2 P C B2678 47.965 160.652 121.521 1.00 39.82 P
ATOM 3 OP1 C B2678 48.124 159.198 121.717 1.00 38.10 O
ATOM 4 OP2 C B2678 49.059 161.556 121.921 1.00 40.40 O
ATOM 5 O5' C B2678 47.606 160.880 119.990 1.00 39.36 O
ATOM 6 C5' C B2678 46.574 160.092 119.377 1.00 41.70 C
ATOM 7 C4' C B2678 46.228 160.637 118.029 1.00 44.75 C
ATOM 8 O4' C B2678 45.879 162.039 118.149 1.00 45.14 O
ATOM 9 C3' C B2678 47.372 160.625 117.037 1.00 45.27 C
ATOM 10 O3' C B2678 47.534 159.331 116.475 1.00 42.89 O
ATOM 11 C2' C B2678 46.931 161.698 116.051 1.00 47.16 C
ATOM 12 O2' C B2678 45.900 161.290 115.179 1.00 48.13 O
ATOM 13 C1' C B2678 46.340 162.733 117.004 1.00 46.96 C
ATOM 14 N1 C B2678 47.351 163.707 117.416 1.00 48.60 N
ATOM 15 C2 C B2678 47.678 164.753 116.536 1.00 49.74 C
ATOM 16 O2 C B2678 47.150 164.786 115.416 1.00 52.36 O
ATOM 17 N3 C B2678 48.563 165.692 116.928 1.00 49.84 N
ATOM 18 C4 C B2678 49.126 165.607 118.135 1.00 49.76 C
ATOM 19 N4 C B2678 49.949 166.582 118.510 1.00 50.36 N
ATOM 20 C5 C B2678 48.851 164.526 119.026 1.00 49.94 C
ATOM 21 C6 C B2678 47.963 163.612 118.633 1.00 49.42 C
ATOM 22 P A B2679 48.883 158.963 115.694 1.00 42.60 P
ATOM 23 OP1 A B2679 48.873 157.481 115.634 1.00 43.64 O
ATOM 24 OP2 A B2679 50.064 159.656 116.282 1.00 43.95 O
ATOM 25 O5' A B2679 48.588 159.511 114.221 1.00 42.11 O
TER
ATOM 2 P G A2681 41.358 163.560 109.391 1.00 41.09 P
ATOM 3 OP1 G A2681 40.572 164.641 108.765 1.00 43.66 O
ATOM 4 OP2 G A2681 42.465 163.909 110.314 1.00 38.13 O
ATOM 5 O5' G A2681 40.331 162.563 110.104 1.00 39.65 O
ATOM 6 C5' G A2681 39.168 162.078 109.414 1.00 38.99 C
ATOM 7 C4' G A2681 38.656 160.787 110.029 1.00 40.06 C
ATOM 8 O4' G A2681 39.724 159.814 110.180 1.00 39.62 O
ATOM 9 C3' G A2681 38.177 160.840 111.462 1.00 40.15 C
ATOM 10 O3' G A2681 36.919 161.453 111.606 1.00 41.31 O
ATOM 11 C2' G A2681 38.068 159.358 111.792 1.00 39.23 C
ATOM 12 O2' G A2681 36.914 158.740 111.283 1.00 40.49 O
ATOM 13 C1' G A2681 39.278 158.793 111.058 1.00 39.65 C
ATOM 14 N9 G A2681 40.282 158.514 112.071 1.00 40.84 N
ATOM 15 C8 G A2681 40.421 157.334 112.756 1.00 40.62 C
ATOM 16 N7 G A2681 41.326 157.388 113.685 1.00 40.62 N
ATOM 17 C5 G A2681 41.835 158.672 113.597 1.00 41.55 C
ATOM 18 C6 G A2681 42.834 159.300 114.357 1.00 43.18 C
ATOM 19 O6 G A2681 43.503 158.830 115.277 1.00 46.58 O
ATOM 20 N1 G A2681 43.034 160.610 113.957 1.00 43.68 N
ATOM 21 C2 G A2681 42.358 161.236 112.944 1.00 43.75 C
ATOM 22 N2 G A2681 42.674 162.531 112.736 1.00 44.16 N
ATOM 23 N3 G A2681 41.435 160.649 112.203 1.00 42.23 N
ATOM 24 C4 G A2681 41.218 159.377 112.590 1.00 41.25 C
ATOM 25 P A A2682 36.565 162.194 112.975 1.00 42.83 P
ATOM 26 OP1 A A2682 35.092 162.320 113.032 1.00 43.27 O
ATOM 27 OP2 A A2682 37.427 163.403 113.045 1.00 43.35 O
ATOM 28 O5' A A2682 37.021 161.181 114.103 1.00 40.11 O
TER
ATOM 1 O3' A B2677 46.631 161.128 122.265 1.00 40.93 O
ATOM 2 P C B2678 47.965 160.652 121.521 1.00 39.82 P
ATOM 3 OP1 C B2678 48.124 159.198 121.717 1.00 38.10 O
ATOM 4 OP2 C B2678 49.059 161.556 121.921 1.00 40.40 O
ATOM 5 O5' C B2678 47.606 160.880 119.990 1.00 39.36 O
ATOM 6 C5' C B2678 46.574 160.092 119.377 1.00 41.70 C
ATOM 7 C4' C B2678 46.228 160.637 118.029 1.00 44.75 C
ATOM 8 O4' C B2678 45.879 162.039 118.149 1.00 45.14 O
ATOM 9 C3' C B2678 47.372 160.625 117.037 1.00 45.27 C
ATOM 10 O3' C B2678 47.534 159.331 116.475 1.00 42.89 O
ATOM 11 C2' C B2678 46.931 161.698 116.051 1.00 47.16 C
ATOM 12 O2' C B2678 45.900 161.290 115.179 1.00 48.13 O
ATOM 13 C1' C B2678 46.340 162.733 117.004 1.00 46.96 C
ATOM 14 N1 C B2678 47.351 163.707 117.416 1.00 48.60 N
ATOM 15 C2 C B2678 47.678 164.753 116.536 1.00 49.74 C
ATOM 16 O2 C B2678 47.150 164.786 115.416 1.00 52.36 O
ATOM 17 N3 C B2678 48.563 165.692 116.928 1.00 49.84 N
ATOM 18 C4 C B2678 49.126 165.607 118.135 1.00 49.76 C
ATOM 19 N4 C B2678 49.949 166.582 118.510 1.00 50.36 N
ATOM 20 C5 C B2678 48.851 164.526 119.026 1.00 49.94 C
ATOM 21 C6 C B2678 47.963 163.612 118.633 1.00 49.42 C
ATOM 22 P A B2679 48.883 158.963 115.694 1.00 42.60 P
ATOM 23 OP1 A B2679 48.873 157.481 115.634 1.00 43.64 O
ATOM 24 OP2 A B2679 50.064 159.656 116.282 1.00 43.95 O
ATOM 25 O5' A B2679 48.588 159.511 114.221 1.00 42.11 O
TER
Atoms:
OP1: (40.572,164.641,108.765)
OP2: (42.465,163.909,110.314)
C3': (38.177,160.840,111.462)
C1': (39.278,158.793,111.058)
C5': (39.168,162.078,109.414)
O6: (43.503,158.830,115.277)
O4': (39.724,159.814,110.180)
C8: (40.421,157.334,112.756)
C2: (42.358,161.236,112.944)
C6: (42.834,159.300,114.357)
C5: (41.835,158.672,113.597)
C4: (41.218,159.377,112.590)
P: (41.358,163.560,109.391)
C4': (38.656,160.787,110.029)
C2': (38.068,159.358,111.792)
O2': (36.914,158.740,111.283)
N1: (43.034,160.610,113.957)
N2: (42.674,162.531,112.736)
N3: (41.435,160.649,112.203)
N7: (41.326,157.388,113.685)
N9: (40.282,158.514,112.071)
O5': (40.331,162.563,110.104)
O3': (36.919,161.453,111.606)
OP2: (42.465,163.909,110.314)
C3': (38.177,160.840,111.462)
C1': (39.278,158.793,111.058)
C5': (39.168,162.078,109.414)
O6: (43.503,158.830,115.277)
O4': (39.724,159.814,110.180)
C8: (40.421,157.334,112.756)
C2: (42.358,161.236,112.944)
C6: (42.834,159.300,114.357)
C5: (41.835,158.672,113.597)
C4: (41.218,159.377,112.590)
P: (41.358,163.560,109.391)
C4': (38.656,160.787,110.029)
C2': (38.068,159.358,111.792)
O2': (36.914,158.740,111.283)
N1: (43.034,160.610,113.957)
N2: (42.674,162.531,112.736)
N3: (41.435,160.649,112.203)
N7: (41.326,157.388,113.685)
N9: (40.282,158.514,112.071)
O5': (40.331,162.563,110.104)
O3': (36.919,161.453,111.606)
C2: (47.678,164.753,116.536)
OP1: (48.124,159.198,121.717)
OP2: (49.059,161.556,121.921)
C4: (49.126,165.607,118.135)
O5': (47.606,160.880,119.990)
C3': (47.372,160.625,117.037)
C1': (46.340,162.733,117.004)
O4': (45.879,162.039,118.149)
C5': (46.574,160.092,119.377)
P: (47.965,160.652,121.521)
O2: (47.150,164.786,115.416)
C4': (46.228,160.637,118.029)
C2': (46.931,161.698,116.051)
O2': (45.900,161.290,115.179)
N1: (47.351,163.707,117.416)
N3: (48.563,165.692,116.928)
N4: (49.949,166.582,118.510)
C6: (47.963,163.612,118.633)
C5: (48.851,164.526,119.026)
O3': (47.534,159.331,116.475)
OP1: (48.124,159.198,121.717)
OP2: (49.059,161.556,121.921)
C4: (49.126,165.607,118.135)
O5': (47.606,160.880,119.990)
C3': (47.372,160.625,117.037)
C1': (46.340,162.733,117.004)
O4': (45.879,162.039,118.149)
C5': (46.574,160.092,119.377)
P: (47.965,160.652,121.521)
O2: (47.150,164.786,115.416)
C4': (46.228,160.637,118.029)
C2': (46.931,161.698,116.051)
O2': (45.900,161.290,115.179)
N1: (47.351,163.707,117.416)
N3: (48.563,165.692,116.928)
N4: (49.949,166.582,118.510)
C6: (47.963,163.612,118.633)
C5: (48.851,164.526,119.026)
O3': (47.534,159.331,116.475)
Image (generated by PyMOL):